RNA–Protein interactions for RNA: ENST00000534276.5

CHRDL2-209, Transcript of chordin like 2, humanhuman

TSL 1 (best)

Gene CHRDL2, Length 1,415 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL2-209ENST00000534276 WASHC2CQ9Y4E1 1318 aa19.04■□□□□ 0.64
CHRDL2-209ENST00000534276 FAM135AQ9P2D6 1515 aa19.04■□□□□ 0.64
CHRDL2-209ENST00000534276 CEP170BQ9Y4F5 1589 aaPredicted RBP19.03■□□□□ 0.64
CHRDL2-209ENST00000534276 FBXO31Q5XUX0 539 aaPredicted RBP19.03■□□□□ 0.64
CHRDL2-209ENST00000534276 KDM5DQ9BY66 1539 aa19.03■□□□□ 0.64
CHRDL2-209ENST00000534276 PLA2R1Q13018 1463 aa19.03■□□□□ 0.64
CHRDL2-209ENST00000534276 MAST1Q9Y2H9 1570 aa19.02■□□□□ 0.64
CHRDL2-209ENST00000534276 ZNF142P52746 1687 aaPredicted RBP19.02■□□□□ 0.63
CHRDL2-209ENST00000534276 PKD2Q13563 968 aa19.01■□□□□ 0.63
CHRDL2-209ENST00000534276 PZPP20742 1482 aa19.01■□□□□ 0.63
CHRDL2-209ENST00000534276 TNRQ92752 1358 aa19.01■□□□□ 0.63
CHRDL2-209ENST00000534276 A2ML1A8K2U0 1454 aa19■□□□□ 0.63
CHRDL2-209ENST00000534276 TCOF1Q13428 1488 aaKnown RBP18.99■□□□□ 0.63
CHRDL2-209ENST00000534276 LTBP4Q8N2S1 1624 aa18.98■□□□□ 0.63
CHRDL2-209ENST00000534276 ABCC5O15440 1437 aa18.95■□□□□ 0.62
CHRDL2-209ENST00000534276 DNMT1P26358 1616 aaKnown RBP18.95■□□□□ 0.62
CHRDL2-209ENST00000534276 RNF17Q9BXT8 1623 aaKnown RBP18.95■□□□□ 0.62
CHRDL2-209ENST00000534276 ABCC3O15438 1527 aa18.93■□□□□ 0.62
CHRDL2-209ENST00000534276 ZNF335Q9H4Z2 1342 aaPredicted RBP18.93■□□□□ 0.62
CHRDL2-209ENST00000534276 DUOX2Q9NRD8 1548 aa18.93■□□□□ 0.62
CHRDL2-209ENST00000534276 FGD6Q6ZV73 1430 aa18.93■□□□□ 0.62
CHRDL2-209ENST00000534276 KIF15Q9NS87 1388 aa18.92■□□□□ 0.62
CHRDL2-209ENST00000534276 PTPN23Q9H3S7 1636 aa18.92■□□□□ 0.62
CHRDL2-209ENST00000534276 EIF2AK4Q9P2K8 1649 aaKnown RBP18.92■□□□□ 0.62
CHRDL2-209ENST00000534276 SHANK2Q9UPX8 1470 aa18.92■□□□□ 0.62
CHRDL2-209ENST00000534276 NLRP1Q9C000 1473 aa18.91■□□□□ 0.62
CHRDL2-209ENST00000534276 RRP7BPQ9NSQ0 103 aa18.91■□□□□ 0.62
CHRDL2-209ENST00000534276 IQSEC2Q5JU85 1478 aa18.9■□□□□ 0.62
CHRDL2-209ENST00000534276 THEMISQ8N1K5 641 aaPredicted RBP18.9■□□□□ 0.62
CHRDL2-209ENST00000534276 DAPK1P53355 1430 aa18.89■□□□□ 0.62
CHRDL2-209ENST00000534276 MROH1Q8NDA8 1641 aa18.89■□□□□ 0.61
CHRDL2-209ENST00000534276 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.87■□□□□ 0.61
CHRDL2-209ENST00000534276 ANKLE2Q86XL3 938 aa18.87■□□□□ 0.61
CHRDL2-209ENST00000534276 ERBINQ96RT1 1412 aa18.87■□□□□ 0.61
CHRDL2-209ENST00000534276 ZC3H13Q5T200 1668 aaKnown RBP18.87■□□□□ 0.61
CHRDL2-209ENST00000534276 ERVK-7P63135 1459 aa18.86■□□□□ 0.61
CHRDL2-209ENST00000534276 SPATA31D1Q6ZQQ2 1576 aa18.85■□□□□ 0.61
CHRDL2-209ENST00000534276 UGGT1Q9NYU2 1555 aa18.85■□□□□ 0.61
CHRDL2-209ENST00000534276 CROCC2H7BZ55 1655 aa18.85■□□□□ 0.61
CHRDL2-209ENST00000534276 CHIC2Q9UKJ5 165 aa18.84■□□□□ 0.61
CHRDL2-209ENST00000534276 NEURL4Q96JN8 1562 aa18.84■□□□□ 0.61
CHRDL2-209ENST00000534276 ANKRD30AQ9BXX3 1397 aa18.83■□□□□ 0.61
CHRDL2-209ENST00000534276 TRIM26Q12899 539 aaPredicted RBP18.83■□□□□ 0.6
CHRDL2-209ENST00000534276 PRDM15P57071 1507 aaPredicted RBP18.82■□□□□ 0.6
CHRDL2-209ENST00000534276 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.82■□□□□ 0.6
CHRDL2-209ENST00000534276 ARHGAP31Q2M1Z3 1444 aa18.81■□□□□ 0.6
CHRDL2-209ENST00000534276 CEP152O94986 1710 aa18.79■□□□□ 0.6
CHRDL2-209ENST00000534276 POLR1AO95602 1720 aaPredicted RBP18.79■□□□□ 0.6
CHRDL2-209ENST00000534276 MED14O60244 1454 aa18.79■□□□□ 0.6
CHRDL2-209ENST00000534276 UBAP1LF5GYI3 381 aa18.79■□□□□ 0.6
CHRDL2-209ENST00000534276 NPHP4O75161 1426 aaPredicted RBP18.79■□□□□ 0.6
CHRDL2-209ENST00000534276 KANK1Q14678 1352 aa18.78■□□□□ 0.6
CHRDL2-209ENST00000534276 FAM50AQ14320 339 aaKnown RBP18.78■□□□□ 0.6
CHRDL2-209ENST00000534276 DEPDC5O75140 1603 aa18.77■□□□□ 0.59
CHRDL2-209ENST00000534276 ADGRL2O95490 1459 aa18.76■□□□□ 0.59
CHRDL2-209ENST00000534276 CPS1P31327 1500 aa18.75■□□□□ 0.59
CHRDL2-209ENST00000534276 CFAP65Q6ZU64 1925 aaKnown RBP18.74■□□□□ 0.59
CHRDL2-209ENST00000534276 VWDEQ8N2E2 1590 aa18.73■□□□□ 0.59
CHRDL2-209ENST00000534276 LMTK2Q8IWU2 1503 aa18.72■□□□□ 0.59
CHRDL2-209ENST00000534276 PHF23Q9BUL5 403 aaPredicted RBP18.72■□□□□ 0.59
CHRDL2-209ENST00000534276 UBR1Q8IWV7 1749 aa18.7■□□□□ 0.58
CHRDL2-209ENST00000534276 ANKRD50Q9ULJ7 1429 aa18.7■□□□□ 0.58
CHRDL2-209ENST00000534276 LTKP29376 864 aa18.7■□□□□ 0.58
CHRDL2-209ENST00000534276 IQGAP1P46940 1657 aa18.7■□□□□ 0.58
CHRDL2-209ENST00000534276 SCAF11Q99590 1463 aaKnown RBP18.69■□□□□ 0.58
CHRDL2-209ENST00000534276 ARHGAP23Q9P227 1491 aa18.69■□□□□ 0.58
CHRDL2-209ENST00000534276 TXNDC2Q86VQ3 553 aa18.69■□□□□ 0.58
CHRDL2-209ENST00000534276 DISP3Q9P2K9 1392 aa18.68■□□□□ 0.58
CHRDL2-209ENST00000534276 SLIT1O75093 1534 aa18.68■□□□□ 0.58
CHRDL2-209ENST00000534276 IDI1Q13907 227 aa18.67■□□□□ 0.58
CHRDL2-209ENST00000534276 TOM1O60784 492 aa18.66■□□□□ 0.58
CHRDL2-209ENST00000534276 STAG3Q9UJ98 1225 aa18.66■□□□□ 0.58
CHRDL2-209ENST00000534276 EID1Q9Y6B2 187 aa18.66■□□□□ 0.58
CHRDL2-209ENST00000534276 TMEM2Q9UHN6 1383 aa18.66■□□□□ 0.58
CHRDL2-209ENST00000534276 NOS1P29475 1434 aa18.65■□□□□ 0.58
CHRDL2-209ENST00000534276 EFCAB6Q5THR3 1501 aa18.65■□□□□ 0.58
CHRDL2-209ENST00000534276 PCGF6Q9BYE7 350 aa18.65■□□□□ 0.58
CHRDL2-209ENST00000534276 PIK3C2BO00750 1634 aa18.64■□□□□ 0.57
CHRDL2-209ENST00000534276 PIP4K2BP78356 416 aa18.63■□□□□ 0.57
CHRDL2-209ENST00000534276 SCAF1Q9H7N4 1312 aaKnown RBP18.62■□□□□ 0.57
CHRDL2-209ENST00000534276 SLC52A1Q9NWF4 448 aa18.62■□□□□ 0.57
CHRDL2-209ENST00000534276 SYNMO15061 1565 aa18.61■□□□□ 0.57
CHRDL2-209ENST00000534276 LRRC7Q96NW7 1537 aa18.61■□□□□ 0.57
CHRDL2-209ENST00000534276 PPARGC1BQ86YN6 1023 aaKnown RBP18.61■□□□□ 0.57
CHRDL2-209ENST00000534276 ROCK1Q13464 1354 aa18.61■□□□□ 0.57
CHRDL2-209ENST00000534276 RPRD2Q5VT52 1461 aaKnown RBP18.6■□□□□ 0.57
CHRDL2-209ENST00000534276 STRCP1A6NGW2 1772 aa18.59■□□□□ 0.57
CHRDL2-209ENST00000534276 KDM5AP29375 1690 aaKnown RBP18.59■□□□□ 0.57
CHRDL2-209ENST00000534276 HSPA1LP34931 641 aa18.58■□□□□ 0.57
CHRDL2-209ENST00000534276 ILDR2Q71H61 639 aa18.57■□□□□ 0.56
CHRDL2-209ENST00000534276 ITGAEP38570 1179 aa18.56■□□□□ 0.56
CHRDL2-209ENST00000534276 ALKQ9UM73 1620 aa18.55■□□□□ 0.56
CHRDL2-209ENST00000534276 TET3O43151 1660 aa18.55■□□□□ 0.56
CHRDL2-209ENST00000534276 ADGRB3O60242 1522 aa18.55■□□□□ 0.56
CHRDL2-209ENST00000534276 UNC13BO14795 1591 aa18.54■□□□□ 0.56
CHRDL2-209ENST00000534276 SLC26A8Q96RN1 970 aa18.53■□□□□ 0.56
CHRDL2-209ENST00000534276 KCNA6P17658 529 aa18.51■□□□□ 0.55
CHRDL2-209ENST00000534276 NUP155O75694 1391 aa18.51■□□□□ 0.55
CHRDL2-209ENST00000534276 ZFYVE9O95405 1425 aa18.49■□□□□ 0.55
CHRDL2-209ENST00000534276 GCC2Q8IWJ2 1684 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms