RNA–Protein interactions for RNA: ENST00000534234.5

COPB1-211, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 5

Gene COPB1, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-211ENST00000534234 CLTCQ00610 1675 aaKnown RBP13.93□□□□□ -0.18
COPB1-211ENST00000534234 STRCQ7RTU9 1775 aa13.93□□□□□ -0.18
COPB1-211ENST00000534234 PKD2Q13563 968 aa13.92□□□□□ -0.18
COPB1-211ENST00000534234 CAMSAP1Q5T5Y3 1602 aa13.9□□□□□ -0.18
COPB1-211ENST00000534234 TNRQ92752 1358 aa13.89□□□□□ -0.19
COPB1-211ENST00000534234 RRP7BPQ9NSQ0 103 aa13.88□□□□□ -0.19
COPB1-211ENST00000534234 KDM5DQ9BY66 1539 aa13.87□□□□□ -0.19
COPB1-211ENST00000534234 PZPP20742 1482 aa13.87□□□□□ -0.19
COPB1-211ENST00000534234 ABCC5O15440 1437 aa13.86□□□□□ -0.19
COPB1-211ENST00000534234 A2ML1A8K2U0 1454 aa13.86□□□□□ -0.19
COPB1-211ENST00000534234 PLA2R1Q13018 1463 aa13.86□□□□□ -0.19
COPB1-211ENST00000534234 FAM135AQ9P2D6 1515 aa13.86□□□□□ -0.19
COPB1-211ENST00000534234 MAST1Q9Y2H9 1570 aa13.86□□□□□ -0.19
COPB1-211ENST00000534234 CEP170BQ9Y4F5 1589 aaPredicted RBP13.86□□□□□ -0.19
COPB1-211ENST00000534234 THEMISQ8N1K5 641 aaPredicted RBP13.85□□□□□ -0.19
COPB1-211ENST00000534234 CHIC2Q9UKJ5 165 aa13.85□□□□□ -0.19
COPB1-211ENST00000534234 FGD6Q6ZV73 1430 aa13.85□□□□□ -0.19
COPB1-211ENST00000534234 MYO3AQ8NEV4 1616 aa13.85□□□□□ -0.19
COPB1-211ENST00000534234 ZNF335Q9H4Z2 1342 aaPredicted RBP13.84□□□□□ -0.19
COPB1-211ENST00000534234 KIF15Q9NS87 1388 aa13.84□□□□□ -0.19
COPB1-211ENST00000534234 TCOF1Q13428 1488 aaKnown RBP13.84□□□□□ -0.19
COPB1-211ENST00000534234 ANKLE2Q86XL3 938 aa13.83□□□□□ -0.2
COPB1-211ENST00000534234 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.83□□□□□ -0.21e-7■□□□□ 10.3
COPB1-211ENST00000534234 LTBP4Q8N2S1 1624 aa13.82□□□□□ -0.2
COPB1-211ENST00000534234 DUOX2Q9NRD8 1548 aa13.82□□□□□ -0.2
COPB1-211ENST00000534234 DAPK1P53355 1430 aa13.82□□□□□ -0.2
COPB1-211ENST00000534234 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.82□□□□□ -0.23e-9■■□□□ 11.4
COPB1-211ENST00000534234 PTPN23Q9H3S7 1636 aa13.81□□□□□ -0.2
COPB1-211ENST00000534234 FAM50AQ14320 339 aaKnown RBP13.81□□□□□ -0.2
COPB1-211ENST00000534234 ZNF142P52746 1687 aaPredicted RBP13.81□□□□□ -0.2
COPB1-211ENST00000534234 SHANK2Q9UPX8 1470 aa13.81□□□□□ -0.2
COPB1-211ENST00000534234 DNMT1P26358 1616 aaKnown RBP13.8□□□□□ -0.2
COPB1-211ENST00000534234 ABCC3O15438 1527 aa13.8□□□□□ -0.2
COPB1-211ENST00000534234 NLRP1Q9C000 1473 aa13.8□□□□□ -0.2
COPB1-211ENST00000534234 ANKRD30AQ9BXX3 1397 aa13.8□□□□□ -0.2
COPB1-211ENST00000534234 ERBINQ96RT1 1412 aa13.78□□□□□ -0.2
COPB1-211ENST00000534234 RNF17Q9BXT8 1623 aaKnown RBP13.78□□□□□ -0.2
COPB1-211ENST00000534234 EIF2AK4Q9P2K8 1649 aaKnown RBP13.78□□□□□ -0.2
COPB1-211ENST00000534234 UGGT1Q9NYU2 1555 aa13.77□□□□□ -0.21
COPB1-211ENST00000534234 KANK1Q14678 1352 aa13.77□□□□□ -0.21
COPB1-211ENST00000534234 MROH1Q8NDA8 1641 aa13.76□□□□□ -0.21
COPB1-211ENST00000534234 ERVK-7P63135 1459 aa13.76□□□□□ -0.21
COPB1-211ENST00000534234 IQSEC2Q5JU85 1478 aa13.76□□□□□ -0.21
COPB1-211ENST00000534234 UBAP1LF5GYI3 381 aa13.75□□□□□ -0.21
COPB1-211ENST00000534234 SPATA31D1Q6ZQQ2 1576 aa13.74□□□□□ -0.21
COPB1-211ENST00000534234 ARHGAP31Q2M1Z3 1444 aa13.74□□□□□ -0.21
COPB1-211ENST00000534234 ZC3H13Q5T200 1668 aaKnown RBP13.73□□□□□ -0.21
COPB1-211ENST00000534234 NPHP4O75161 1426 aaPredicted RBP13.73□□□□□ -0.21
COPB1-211ENST00000534234 PRDM15P57071 1507 aaPredicted RBP13.71□□□□□ -0.21
COPB1-211ENST00000534234 MED14O60244 1454 aa13.71□□□□□ -0.21
COPB1-211ENST00000534234 TXNDC2Q86VQ3 553 aa13.71□□□□□ -0.22
COPB1-211ENST00000534234 PPARGC1BQ86YN6 1023 aaKnown RBP13.71□□□□□ -0.22
COPB1-211ENST00000534234 STAG3Q9UJ98 1225 aa13.71□□□□□ -0.22
COPB1-211ENST00000534234 CROCC2H7BZ55 1655 aa13.7□□□□□ -0.22
COPB1-211ENST00000534234 NEURL4Q96JN8 1562 aa13.7□□□□□ -0.22
COPB1-211ENST00000534234 LTKP29376 864 aa13.7□□□□□ -0.22
COPB1-211ENST00000534234 IDI1Q13907 227 aa13.7□□□□□ -0.22
COPB1-211ENST00000534234 ADGRL2O95490 1459 aa13.69□□□□□ -0.22
COPB1-211ENST00000534234 ANKRD50Q9ULJ7 1429 aa13.69□□□□□ -0.22
COPB1-211ENST00000534234 FOXD1Q16676 465 aa13.69□□□□□ -0.22
COPB1-211ENST00000534234 EID1Q9Y6B2 187 aa13.69□□□□□ -0.22
COPB1-211ENST00000534234 CEP152O94986 1710 aa13.68□□□□□ -0.22
COPB1-211ENST00000534234 TOM1O60784 492 aa13.66□□□□□ -0.22
COPB1-211ENST00000534234 ITGAEP38570 1179 aa13.66□□□□□ -0.22
COPB1-211ENST00000534234 CPS1P31327 1500 aa13.66□□□□□ -0.22
COPB1-211ENST00000534234 LMTK2Q8IWU2 1503 aa13.66□□□□□ -0.22
COPB1-211ENST00000534234 DEPDC5O75140 1603 aa13.66□□□□□ -0.22
COPB1-211ENST00000534234 PIP4K2BP78356 416 aa13.65□□□□□ -0.22
COPB1-211ENST00000534234 SLC52A1Q9NWF4 448 aa13.65□□□□□ -0.22
COPB1-211ENST00000534234 SCAF1Q9H7N4 1312 aaKnown RBP13.65□□□□□ -0.22
COPB1-211ENST00000534234 SCAF11Q99590 1463 aaKnown RBP13.65□□□□□ -0.23
COPB1-211ENST00000534234 VWDEQ8N2E2 1590 aa13.64□□□□□ -0.23
COPB1-211ENST00000534234 POLR1AO95602 1720 aaPredicted RBP13.64□□□□□ -0.23
COPB1-211ENST00000534234 DISP3Q9P2K9 1392 aa13.64□□□□□ -0.23
COPB1-211ENST00000534234 TMEM2Q9UHN6 1383 aa13.64□□□□□ -0.23
COPB1-211ENST00000534234 ARHGAP23Q9P227 1491 aa13.63□□□□□ -0.23
COPB1-211ENST00000534234 SLIT1O75093 1534 aa13.62□□□□□ -0.23
COPB1-211ENST00000534234 NOS1P29475 1434 aa13.62□□□□□ -0.23
COPB1-211ENST00000534234 ROCK1Q13464 1354 aa13.62□□□□□ -0.23
COPB1-211ENST00000534234 UBR1Q8IWV7 1749 aa13.61□□□□□ -0.23
COPB1-211ENST00000534234 CFAP65Q6ZU64 1925 aaKnown RBP13.61□□□□□ -0.23
COPB1-211ENST00000534234 IQGAP1P46940 1657 aa13.6□□□□□ -0.23
COPB1-211ENST00000534234 HSPA1LP34931 641 aa13.59□□□□□ -0.23
COPB1-211ENST00000534234 EFCAB6Q5THR3 1501 aa13.59□□□□□ -0.23
COPB1-211ENST00000534234 PIK3C2BO00750 1634 aa13.59□□□□□ -0.23
COPB1-211ENST00000534234 SLC26A8Q96RN1 970 aa13.58□□□□□ -0.23
COPB1-211ENST00000534234 RPRD2Q5VT52 1461 aaKnown RBP13.58□□□□□ -0.24
COPB1-211ENST00000534234 LRRC7Q96NW7 1537 aa13.58□□□□□ -0.24
COPB1-211ENST00000534234 HDGFP51858 240 aaKnown RBP13.58□□□□□ -0.24
COPB1-211ENST00000534234 BCANQ96GW7 911 aa13.58□□□□□ -0.24
COPB1-211ENST00000534234 SYNMO15061 1565 aa13.57□□□□□ -0.24
COPB1-211ENST00000534234 NUP155O75694 1391 aa13.57□□□□□ -0.24
COPB1-211ENST00000534234 CHGAP10645 457 aaKnown RBP13.56□□□□□ -0.24
COPB1-211ENST00000534234 ILDR2Q71H61 639 aa13.56□□□□□ -0.24
COPB1-211ENST00000534234 KCNA6P17658 529 aa13.55□□□□□ -0.24
COPB1-211ENST00000534234 PPP1R15AO75807 674 aaPredicted RBP13.54□□□□□ -0.24
COPB1-211ENST00000534234 PROSER2Q86WR7 435 aaPredicted RBP13.53□□□□□ -0.24
COPB1-211ENST00000534234 ADGRB3O60242 1522 aa13.52□□□□□ -0.24
COPB1-211ENST00000534234 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.52□□□□□ -0.25
COPB1-211ENST00000534234 TET3O43151 1660 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms