RNA–Protein interactions for RNA: ENST00000534062.1

RTL1-201, Transcript of retrotransposon Gag like 1, humanhuman

APPRIS P1 BASIC

Gene RTL1, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL1-201ENST00000534062 PZPP20742 1482 aa13.56□□□□□ -0.24
RTL1-201ENST00000534062 RTEL1-TNFRSF6BF6WH68 1400 aa13.56□□□□□ -0.24
RTL1-201ENST00000534062 PLPPR3Q6T4P5 718 aa13.56□□□□□ -0.24
RTL1-201ENST00000534062 CFAP74Q9C0B2 1584 aa13.56□□□□□ -0.24
RTL1-201ENST00000534062 PPP1R15AO75807 674 aaPredicted RBP13.56□□□□□ -0.24
RTL1-201ENST00000534062 WASHC2CQ9Y4E1 1318 aa13.55□□□□□ -0.24
RTL1-201ENST00000534062 TEX14Q8IWB6 1497 aa13.55□□□□□ -0.24
RTL1-201ENST00000534062 ZFYVE16Q7Z3T8 1539 aa13.55□□□□□ -0.24
RTL1-201ENST00000534062 DHX29Q7Z478 1369 aaKnown RBP13.55□□□□□ -0.24
RTL1-201ENST00000534062 ERBINQ96RT1 1412 aa13.54□□□□□ -0.24
RTL1-201ENST00000534062 ANKRD30BQ9BXX2 1392 aa13.54□□□□□ -0.24
RTL1-201ENST00000534062 YTHDC1Q96MU7 727 aaKnown RBP13.54□□□□□ -0.24
RTL1-201ENST00000534062 ESF1Q9H501 851 aaKnown RBP13.54□□□□□ -0.24
RTL1-201ENST00000534062 TIMELESSQ9UNS1 1208 aa13.54□□□□□ -0.24
RTL1-201ENST00000534062 MAST1Q9Y2H9 1570 aa13.54□□□□□ -0.24
RTL1-201ENST00000534062 A2MP01023 1474 aa13.53□□□□□ -0.24
RTL1-201ENST00000534062 DCAF11Q8TEB1 546 aa13.52□□□□□ -0.25
RTL1-201ENST00000534062 FAM135AQ9P2D6 1515 aa13.52□□□□□ -0.25
RTL1-201ENST00000534062 PLXNC1O60486 1568 aa13.52□□□□□ -0.25
RTL1-201ENST00000534062 YEATS2Q9ULM3 1422 aa13.51□□□□□ -0.25
RTL1-201ENST00000534062 CCDC144AA2RUR9 1427 aa13.51□□□□□ -0.25
RTL1-201ENST00000534062 MAP3K4Q9Y6R4 1608 aa13.51□□□□□ -0.25
RTL1-201ENST00000534062 GLI2P10070 1586 aa13.5□□□□□ -0.25
RTL1-201ENST00000534062 SENP3Q9H4L4 574 aaPredicted RBP13.5□□□□□ -0.25
RTL1-201ENST00000534062 POLR3GLQ9BT43 218 aa13.48□□□□□ -0.25
RTL1-201ENST00000534062 HECW2Q9P2P5 1572 aa13.48□□□□□ -0.25
RTL1-201ENST00000534062 INO80Q9ULG1 1556 aaPredicted RBP13.47□□□□□ -0.25
RTL1-201ENST00000534062 MLH3Q9UHC1 1453 aa13.47□□□□□ -0.25
RTL1-201ENST00000534062 KIDINS220Q9ULH0 1771 aa13.47□□□□□ -0.25
RTL1-201ENST00000534062 RPRD2Q5VT52 1461 aaKnown RBP13.45□□□□□ -0.26
RTL1-201ENST00000534062 STAG3Q9UJ98 1225 aa13.43□□□□□ -0.26
RTL1-201ENST00000534062 CFAP65Q6ZU64 1925 aaKnown RBP13.43□□□□□ -0.26
RTL1-201ENST00000534062 KDM5CP41229 1560 aa13.43□□□□□ -0.26
RTL1-201ENST00000534062 NBPF8Q3BBV2 869 aa13.42□□□□□ -0.26
RTL1-201ENST00000534062 KIF13AQ9H1H9 1805 aa13.42□□□□□ -0.26
RTL1-201ENST00000534062 COL17A1Q9UMD9 1497 aaPredicted RBP13.42□□□□□ -0.26
RTL1-201ENST00000534062 ABCA6Q8N139 1617 aa13.41□□□□□ -0.26
RTL1-201ENST00000534062 EIF4G2P78344 907 aaKnown RBP eCLIP13.41□□□□□ -0.26
RTL1-201ENST00000534062 TSHZ2Q9NRE2 1034 aa13.41□□□□□ -0.26
RTL1-201ENST00000534062 UNC13BO14795 1591 aa13.4□□□□□ -0.26
RTL1-201ENST00000534062 KDM5DQ9BY66 1539 aa13.4□□□□□ -0.26
RTL1-201ENST00000534062 NUTM2DQ5VT03 806 aaPredicted RBP13.39□□□□□ -0.27
RTL1-201ENST00000534062 ATP10AO60312 1499 aa13.39□□□□□ -0.27
RTL1-201ENST00000534062 DDX10Q13206 875 aaKnown RBP13.39□□□□□ -0.27
RTL1-201ENST00000534062 CARD11Q9BXL7 1154 aa13.39□□□□□ -0.27
RTL1-201ENST00000534062 RICTORQ6R327 1708 aa13.39□□□□□ -0.27
RTL1-201ENST00000534062 DIP2CQ9Y2E4 1556 aa13.38□□□□□ -0.27
RTL1-201ENST00000534062 HSPA5P11021 654 aaKnown RBP13.38□□□□□ -0.27
RTL1-201ENST00000534062 ERICH6Q7L0X2 663 aa13.38□□□□□ -0.27
RTL1-201ENST00000534062 IQGAP3Q86VI3 1631 aa13.38□□□□□ -0.27
RTL1-201ENST00000534062 CNGB1Q14028 1251 aaPredicted RBP13.37□□□□□ -0.27
RTL1-201ENST00000534062 PPRC1Q5VV67 1664 aaKnown RBP13.37□□□□□ -0.27
RTL1-201ENST00000534062 FBXO31Q5XUX0 539 aaPredicted RBP13.37□□□□□ -0.27
RTL1-201ENST00000534062 FRMPD1Q5SYB0 1578 aa13.35□□□□□ -0.27
RTL1-201ENST00000534062 PLA2R1Q13018 1463 aa13.35□□□□□ -0.27
RTL1-201ENST00000534062 MAGI2Q86UL8 1455 aa13.34□□□□□ -0.27
RTL1-201ENST00000534062 ROCK2O75116 1388 aaKnown RBP13.33□□□□□ -0.27
RTL1-201ENST00000534062 EIF2AK4Q9P2K8 1649 aaKnown RBP13.33□□□□□ -0.28
RTL1-201ENST00000534062 CEP152O94986 1710 aa13.32□□□□□ -0.28
RTL1-201ENST00000534062 BCANQ96GW7 911 aa13.32□□□□□ -0.28
RTL1-201ENST00000534062 SUPT16HQ9Y5B9 1047 aaKnown RBP13.32□□□□□ -0.28
RTL1-201ENST00000534062 NPATQ14207 1427 aa13.32□□□□□ -0.28
RTL1-201ENST00000534062 PRDM15P57071 1507 aaPredicted RBP13.32□□□□□ -0.28
RTL1-201ENST00000534062 E9PCH4 1651 aa13.31□□□□□ -0.28
RTL1-201ENST00000534062 UGGT1Q9NYU2 1555 aa13.31□□□□□ -0.28
RTL1-201ENST00000534062 NBPF1Q3BBV0 1214 aa13.31□□□□□ -0.28
RTL1-201ENST00000534062 TET3O43151 1660 aa13.3□□□□□ -0.28
RTL1-201ENST00000534062 CEBPAP49715 358 aaPredicted RBP13.3□□□□□ -0.28
RTL1-201ENST00000534062 MIER1Q8N108 512 aa13.3□□□□□ -0.28
RTL1-201ENST00000534062 ZMYM4Q5VZL5 1548 aa13.29□□□□□ -0.28
RTL1-201ENST00000534062 IDI1Q13907 227 aa13.29□□□□□ -0.28
RTL1-201ENST00000534062 ABCC3O15438 1527 aa13.29□□□□□ -0.28
RTL1-201ENST00000534062 DEPDC5O75140 1603 aa13.28□□□□□ -0.28
RTL1-201ENST00000534062 MROH1Q8NDA8 1641 aa13.28□□□□□ -0.28
RTL1-201ENST00000534062 EFCAB6Q5THR3 1501 aa13.28□□□□□ -0.28
RTL1-201ENST00000534062 USP47Q96K76 1375 aa13.27□□□□□ -0.28
RTL1-201ENST00000534062 ST20-MTHFSA0A0A6YYL1 179 aa13.26□□□□□ -0.29
RTL1-201ENST00000534062 RNF17Q9BXT8 1623 aaKnown RBP13.25□□□□□ -0.29
RTL1-201ENST00000534062 CFAP70Q5T0N1 1121 aa13.25□□□□□ -0.29
RTL1-201ENST00000534062 TRPM2O94759 1503 aa13.25□□□□□ -0.29
RTL1-201ENST00000534062 SLC52A1Q9NWF4 448 aa13.25□□□□□ -0.29
RTL1-201ENST00000534062 SPHKAPQ2M3C7 1700 aa13.25□□□□□ -0.29
RTL1-201ENST00000534062 ARHGEF40Q8TER5 1519 aa13.25□□□□□ -0.29
RTL1-201ENST00000534062 PTPRTO14522 1441 aa13.24□□□□□ -0.29
RTL1-201ENST00000534062 ADGRF5Q8IZF2 1346 aa13.24□□□□□ -0.29
RTL1-201ENST00000534062 VWDEQ8N2E2 1590 aa13.24□□□□□ -0.29
RTL1-201ENST00000534062 PPP6R1Q9UPN7 881 aa13.24□□□□□ -0.29
RTL1-201ENST00000534062 CLTCL1P53675 1640 aa13.24□□□□□ -0.29
RTL1-201ENST00000534062 ZMYM3Q14202 1370 aa13.23□□□□□ -0.29
RTL1-201ENST00000534062 CNTLNQ9NXG0 1405 aa13.23□□□□□ -0.29
RTL1-201ENST00000534062 NOS1P29475 1434 aa13.21□□□□□ -0.29
RTL1-201ENST00000534062 PRAG1Q86YV5 1406 aa13.21□□□□□ -0.29
RTL1-201ENST00000534062 CAMSAP1Q5T5Y3 1602 aa13.21□□□□□ -0.29
RTL1-201ENST00000534062 SPATA31E1Q6ZUB1 1445 aa13.21□□□□□ -0.29
RTL1-201ENST00000534062 TMEM132EQ6IEE7 984 aa13.21□□□□□ -0.29
RTL1-201ENST00000534062 STK26Q9P289 416 aa13.21□□□□□ -0.29
RTL1-201ENST00000534062 VGFO15240 615 aaPredicted RBP13.21□□□□□ -0.3
RTL1-201ENST00000534062 LMTK2Q8IWU2 1503 aa13.21□□□□□ -0.3
RTL1-201ENST00000534062 ANP32CO43423 234 aa13.2□□□□□ -0.3
RTL1-201ENST00000534062 SAFB2Q14151 953 aaKnown RBP eCLIP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms