RNA–Protein interactions for RNA: ENST00000534042.5

CAPRIN1-216, Transcript of cell cycle associated protein 1, humanhuman

TSL 5

Gene CAPRIN1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-216ENST00000534042 A2ML1A8K2U0 1454 aa26.75■■□□□ 1.87
CAPRIN1-216ENST00000534042 TCOF1Q13428 1488 aaKnown RBP26.75■■□□□ 1.87
CAPRIN1-216ENST00000534042 LRRC9Q6ZRR7 1453 aa26.75■■□□□ 1.87
CAPRIN1-216ENST00000534042 ZNF335Q9H4Z2 1342 aaPredicted RBP26.74■■□□□ 1.87
CAPRIN1-216ENST00000534042 WASHC2CQ9Y4E1 1318 aa26.74■■□□□ 1.87
CAPRIN1-216ENST00000534042 FBXO31Q5XUX0 539 aaPredicted RBP26.73■■□□□ 1.87
CAPRIN1-216ENST00000534042 KDM5DQ9BY66 1539 aa26.73■■□□□ 1.87
CAPRIN1-216ENST00000534042 FAM135AQ9P2D6 1515 aa26.73■■□□□ 1.87
CAPRIN1-216ENST00000534042 TNRQ92752 1358 aa26.72■■□□□ 1.87
CAPRIN1-216ENST00000534042 DNMT1P26358 1616 aaKnown RBP26.71■■□□□ 1.87
CAPRIN1-216ENST00000534042 PZPP20742 1482 aa26.7■■□□□ 1.87
CAPRIN1-216ENST00000534042 KANK4Q5T7N3 995 aaPredicted RBP26.67■■□□□ 1.86
CAPRIN1-216ENST00000534042 MAP3K1Q13233 1512 aa26.66■■□□□ 1.86
CAPRIN1-216ENST00000534042 DISP3Q9P2K9 1392 aa26.66■■□□□ 1.86
CAPRIN1-216ENST00000534042 MAST1Q9Y2H9 1570 aa26.63■■□□□ 1.85
CAPRIN1-216ENST00000534042 MIA2Q96PC5 1412 aa26.62■■□□□ 1.85
CAPRIN1-216ENST00000534042 UBAP1LF5GYI3 381 aa26.61■■□□□ 1.85
CAPRIN1-216ENST00000534042 MYOM3Q5VTT5 1437 aa26.61■■□□□ 1.85
CAPRIN1-216ENST00000534042 POLR1AO95602 1720 aaPredicted RBP26.6■■□□□ 1.85
CAPRIN1-216ENST00000534042 THEMISQ8N1K5 641 aaPredicted RBP26.59■■□□□ 1.85
CAPRIN1-216ENST00000534042 RNF17Q9BXT8 1623 aaKnown RBP26.58■■□□□ 1.85
CAPRIN1-216ENST00000534042 NLRP1Q9C000 1473 aa26.58■■□□□ 1.85
CAPRIN1-216ENST00000534042 ANKLE2Q86XL3 938 aa26.58■■□□□ 1.85
CAPRIN1-216ENST00000534042 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.57■■□□□ 1.84
CAPRIN1-216ENST00000534042 NEURL4Q96JN8 1562 aa26.55■■□□□ 1.84
CAPRIN1-216ENST00000534042 UGGT1Q9NYU2 1555 aa26.54■■□□□ 1.84
CAPRIN1-216ENST00000534042 EIF2AK4Q9P2K8 1649 aaKnown RBP26.54■■□□□ 1.84
CAPRIN1-216ENST00000534042 ABCC3O15438 1527 aa26.54■■□□□ 1.84
CAPRIN1-216ENST00000534042 ZC3H13Q5T200 1668 aaKnown RBP26.54■■□□□ 1.84
CAPRIN1-216ENST00000534042 APLP2Q06481 763 aa26.53■■□□□ 1.84
CAPRIN1-216ENST00000534042 ILDR2Q71H61 639 aa26.51■■□□□ 1.83
CAPRIN1-216ENST00000534042 SPATA31D1Q6ZQQ2 1576 aa26.5■■□□□ 1.83
CAPRIN1-216ENST00000534042 CFAP65Q6ZU64 1925 aaKnown RBP26.5■■□□□ 1.83
CAPRIN1-216ENST00000534042 DUOX2Q9NRD8 1548 aa26.49■■□□□ 1.83
CAPRIN1-216ENST00000534042 CPS1P31327 1500 aa26.49■■□□□ 1.83
CAPRIN1-216ENST00000534042 SHANK2Q9UPX8 1470 aa26.49■■□□□ 1.83
CAPRIN1-216ENST00000534042 MROH1Q8NDA8 1641 aa26.47■■□□□ 1.83
CAPRIN1-216ENST00000534042 NPHP4O75161 1426 aaPredicted RBP26.47■■□□□ 1.83
CAPRIN1-216ENST00000534042 CEP152O94986 1710 aa26.46■■□□□ 1.83
CAPRIN1-216ENST00000534042 ERVK-7P63135 1459 aa26.46■■□□□ 1.83
CAPRIN1-216ENST00000534042 DEPDC5O75140 1603 aa26.46■■□□□ 1.83
CAPRIN1-216ENST00000534042 MED14O60244 1454 aa26.45■■□□□ 1.82
CAPRIN1-216ENST00000534042 KIF15Q9NS87 1388 aa26.44■■□□□ 1.82
CAPRIN1-216ENST00000534042 ABCC5O15440 1437 aa26.43■■□□□ 1.82
CAPRIN1-216ENST00000534042 RRP7BPQ9NSQ0 103 aa26.43■■□□□ 1.82
CAPRIN1-216ENST00000534042 PTPN23Q9H3S7 1636 aa26.43■■□□□ 1.82
CAPRIN1-216ENST00000534042 TOM1O60784 492 aa26.42■■□□□ 1.82
CAPRIN1-216ENST00000534042 SCAF1Q9H7N4 1312 aaKnown RBP26.41■■□□□ 1.82
CAPRIN1-216ENST00000534042 VWDEQ8N2E2 1590 aa26.41■■□□□ 1.82
CAPRIN1-216ENST00000534042 CROCC2H7BZ55 1655 aa26.41■■□□□ 1.82
CAPRIN1-216ENST00000534042 IQGAP1P46940 1657 aa26.39■■□□□ 1.82
CAPRIN1-216ENST00000534042 ERBINQ96RT1 1412 aa26.39■■□□□ 1.81
CAPRIN1-216ENST00000534042 PIP4K2BP78356 416 aa26.38■■□□□ 1.81
CAPRIN1-216ENST00000534042 SOCS7O14512 581 aa26.37■■□□□ 1.81
CAPRIN1-216ENST00000534042 DAPK1P53355 1430 aa26.37■■□□□ 1.81
CAPRIN1-216ENST00000534042 PRDM15P57071 1507 aaPredicted RBP26.36■■□□□ 1.81
CAPRIN1-216ENST00000534042 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.36■■□□□ 1.813e-12■■■□□ 16.3
CAPRIN1-216ENST00000534042 FGD6Q6ZV73 1430 aa26.36■■□□□ 1.81
CAPRIN1-216ENST00000534042 ARHGAP31Q2M1Z3 1444 aa26.35■■□□□ 1.81
CAPRIN1-216ENST00000534042 UBR1Q8IWV7 1749 aa26.34■■□□□ 1.81
CAPRIN1-216ENST00000534042 HSPA1LP34931 641 aa26.33■■□□□ 1.81
CAPRIN1-216ENST00000534042 KANK1Q14678 1352 aa26.32■■□□□ 1.8
CAPRIN1-216ENST00000534042 CHIC2Q9UKJ5 165 aa26.31■■□□□ 1.8
CAPRIN1-216ENST00000534042 ANKRD30AQ9BXX3 1397 aa26.31■■□□□ 1.8
CAPRIN1-216ENST00000534042 SCAF11Q99590 1463 aaKnown RBP26.3■■□□□ 1.8
CAPRIN1-216ENST00000534042 TXNDC2Q86VQ3 553 aa26.29■■□□□ 1.8
CAPRIN1-216ENST00000534042 STRCP1A6NGW2 1772 aa26.28■■□□□ 1.8
CAPRIN1-216ENST00000534042 LTKP29376 864 aa26.26■■□□□ 1.79
CAPRIN1-216ENST00000534042 SLIT1O75093 1534 aa26.25■■□□□ 1.79
CAPRIN1-216ENST00000534042 ARHGAP23Q9P227 1491 aa26.25■■□□□ 1.79
CAPRIN1-216ENST00000534042 EID1Q9Y6B2 187 aa26.25■■□□□ 1.79
CAPRIN1-216ENST00000534042 LRRC7Q96NW7 1537 aa26.24■■□□□ 1.79
CAPRIN1-216ENST00000534042 STAG3Q9UJ98 1225 aa26.24■■□□□ 1.79
CAPRIN1-216ENST00000534042 PIK3C2BO00750 1634 aa26.21■■□□□ 1.79
CAPRIN1-216ENST00000534042 SYNMO15061 1565 aa26.21■■□□□ 1.79
CAPRIN1-216ENST00000534042 ALKQ9UM73 1620 aa26.21■■□□□ 1.79
CAPRIN1-216ENST00000534042 LMTK2Q8IWU2 1503 aa26.2■■□□□ 1.79
CAPRIN1-216ENST00000534042 FAM50AQ14320 339 aaKnown RBP26.19■■□□□ 1.78
CAPRIN1-216ENST00000534042 TMEM2Q9UHN6 1383 aa26.19■■□□□ 1.78
CAPRIN1-216ENST00000534042 IDI1Q13907 227 aa26.18■■□□□ 1.78
CAPRIN1-216ENST00000534042 ADGRL2O95490 1459 aa26.16■■□□□ 1.78
CAPRIN1-216ENST00000534042 MED1Q15648 1581 aaPredicted RBP26.15■■□□□ 1.78
CAPRIN1-216ENST00000534042 EFCAB6Q5THR3 1501 aa26.14■■□□□ 1.78
CAPRIN1-216ENST00000534042 KDM5AP29375 1690 aaKnown RBP26.13■■□□□ 1.77
CAPRIN1-216ENST00000534042 SENP3Q9H4L4 574 aaPredicted RBP26.11■■□□□ 1.77
CAPRIN1-216ENST00000534042 NOS1P29475 1434 aa26.11■■□□□ 1.77
CAPRIN1-216ENST00000534042 ANKRD50Q9ULJ7 1429 aa26.1■■□□□ 1.77
CAPRIN1-216ENST00000534042 SLC52A1Q9NWF4 448 aa26.09■■□□□ 1.77
CAPRIN1-216ENST00000534042 XIRP1Q702N8 1843 aaKnown RBP26.07■■□□□ 1.76
CAPRIN1-216ENST00000534042 ADGRB3O60242 1522 aa26.04■■□□□ 1.76
CAPRIN1-216ENST00000534042 PHF23Q9BUL5 403 aaPredicted RBP26.04■■□□□ 1.76
CAPRIN1-216ENST00000534042 RPRD2Q5VT52 1461 aaKnown RBP26.04■■□□□ 1.76
CAPRIN1-216ENST00000534042 KCNA6P17658 529 aa26.03■■□□□ 1.76
CAPRIN1-216ENST00000534042 SLC26A8Q96RN1 970 aa26.03■■□□□ 1.76
CAPRIN1-216ENST00000534042 TET3O43151 1660 aa26.01■■□□□ 1.75
CAPRIN1-216ENST00000534042 BCANQ96GW7 911 aa26.01■■□□□ 1.75
CAPRIN1-216ENST00000534042 TMEM94Q12767 1356 aa26■■□□□ 1.75
CAPRIN1-216ENST00000534042 PROSER2Q86WR7 435 aaPredicted RBP25.99■■□□□ 1.75
CAPRIN1-216ENST00000534042 MYO5BQ9ULV0 1848 aa25.95■■□□□ 1.75
CAPRIN1-216ENST00000534042 HDGFP51858 240 aaKnown RBP25.95■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms