RNA–Protein interactions for RNA: ENST00000533998.5

FNTA-214, Transcript of farnesyltransferase, CAAX box, alpha, humanhuman

TSL 3

Gene FNTA, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNTA-214ENST00000533998 EIF2AK4Q9P2K8 1649 aaKnown RBP39.19■■■■□ 3.86
FNTA-214ENST00000533998 KDM5DQ9BY66 1539 aa39.16■■■■□ 3.86
FNTA-214ENST00000533998 WASHC2CQ9Y4E1 1318 aa39.15■■■■□ 3.86
FNTA-214ENST00000533998 PTPRKQ15262 1439 aa39.15■■■■□ 3.86
FNTA-214ENST00000533998 RNF17Q9BXT8 1623 aaKnown RBP39.15■■■■□ 3.86
FNTA-214ENST00000533998 FAM50AQ14320 339 aaKnown RBP39.15■■■■□ 3.86
FNTA-214ENST00000533998 KIF15Q9NS87 1388 aa39.15■■■■□ 3.86
FNTA-214ENST00000533998 RRP7BPQ9NSQ0 103 aa39.14■■■■□ 3.86
FNTA-214ENST00000533998 CHIC2Q9UKJ5 165 aa39.11■■■■□ 3.85
FNTA-214ENST00000533998 ANKRD30AQ9BXX3 1397 aa39.09■■■■□ 3.85
FNTA-214ENST00000533998 ERBINQ96RT1 1412 aa39.07■■■■□ 3.85
FNTA-214ENST00000533998 PPARGC1BQ86YN6 1023 aaKnown RBP39.07■■■■□ 3.85
FNTA-214ENST00000533998 NCOA1Q15788 1441 aa39.05■■■■□ 3.84
FNTA-214ENST00000533998 PZPP20742 1482 aa39.03■■■■□ 3.84
FNTA-214ENST00000533998 MROH1Q8NDA8 1641 aa39.03■■■■□ 3.84
FNTA-214ENST00000533998 STRCQ7RTU9 1775 aa39.01■■■■□ 3.84
FNTA-214ENST00000533998 ZC3H13Q5T200 1668 aaKnown RBP39.01■■■■□ 3.84
FNTA-214ENST00000533998 ADGRL2O95490 1459 aa39.01■■■■□ 3.84
FNTA-214ENST00000533998 MYO3AQ8NEV4 1616 aa39■■■■□ 3.83
FNTA-214ENST00000533998 ABCC3O15438 1527 aa38.99■■■■□ 3.83
FNTA-214ENST00000533998 FBXO31Q5XUX0 539 aaPredicted RBP38.98■■■■□ 3.83
FNTA-214ENST00000533998 ZNF142P52746 1687 aaPredicted RBP38.96■■■■□ 3.83
FNTA-214ENST00000533998 DMRT2Q9Y5R5 561 aa38.93■■■■□ 3.82
FNTA-214ENST00000533998 PRDM15P57071 1507 aaPredicted RBP38.92■■■■□ 3.82
FNTA-214ENST00000533998 TNRQ92752 1358 aa38.92■■■■□ 3.82
FNTA-214ENST00000533998 CEP170BQ9Y4F5 1589 aaPredicted RBP38.91■■■■□ 3.82
FNTA-214ENST00000533998 CEP152O94986 1710 aa38.91■■■■□ 3.82
FNTA-214ENST00000533998 DEPDC5O75140 1603 aa38.9■■■■□ 3.82
FNTA-214ENST00000533998 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP38.89■■■■□ 3.82
FNTA-214ENST00000533998 CAMSAP1Q5T5Y3 1602 aa38.88■■■■□ 3.81
FNTA-214ENST00000533998 A2ML1A8K2U0 1454 aa38.86■■■■□ 3.81
FNTA-214ENST00000533998 GRWD1Q9BQ67 446 aaKnown RBP eCLIP38.85■■■■□ 3.81
FNTA-214ENST00000533998 KANK1Q14678 1352 aa38.82■■■■□ 3.81
FNTA-214ENST00000533998 PTPRTO14522 1441 aa38.8■■■■□ 3.8
FNTA-214ENST00000533998 ANKRD50Q9ULJ7 1429 aa38.8■■■■□ 3.8
FNTA-214ENST00000533998 CFAP65Q6ZU64 1925 aaKnown RBP38.8■■■■□ 3.8
FNTA-214ENST00000533998 PLA2R1Q13018 1463 aa38.79■■■■□ 3.8
FNTA-214ENST00000533998 SPATA31D1Q6ZQQ2 1576 aa38.79■■■■□ 3.8
FNTA-214ENST00000533998 ROCK1Q13464 1354 aa38.79■■■■□ 3.8
FNTA-214ENST00000533998 ARHGAP31Q2M1Z3 1444 aa38.78■■■■□ 3.8
FNTA-214ENST00000533998 NLRP1Q9C000 1473 aa38.77■■■■□ 3.8
FNTA-214ENST00000533998 ERVK-7P63135 1459 aa38.76■■■■□ 3.8
FNTA-214ENST00000533998 VWDEQ8N2E2 1590 aa38.75■■■■□ 3.79
FNTA-214ENST00000533998 RRBP1Q9P2E9 1410 aaKnown RBP38.73■■■■□ 3.79
FNTA-214ENST00000533998 ITGAEP38570 1179 aa38.73■■■■□ 3.79
FNTA-214ENST00000533998 PKD2Q13563 968 aa38.73■■■■□ 3.79
FNTA-214ENST00000533998 NCKAP5LQ9HCH0 1330 aa38.72■■■■□ 3.79
FNTA-214ENST00000533998 LMTK2Q8IWU2 1503 aa38.72■■■■□ 3.79
FNTA-214ENST00000533998 ILDR1Q86SU0 546 aaPredicted RBP38.71■■■■□ 3.79
FNTA-214ENST00000533998 UGGT1Q9NYU2 1555 aa38.66■■■■□ 3.78
FNTA-214ENST00000533998 THEMISQ8N1K5 641 aaPredicted RBP38.66■■■■□ 3.78
FNTA-214ENST00000533998 CERKQ8TCT0 537 aa38.59■■■■□ 3.77
FNTA-214ENST00000533998 EFCAB6Q5THR3 1501 aa38.57■■■■□ 3.76
FNTA-214ENST00000533998 UNC13BO14795 1591 aa38.57■■■■□ 3.76
FNTA-214ENST00000533998 FBXO41Q8TF61 875 aa38.56■■■■□ 3.76
FNTA-214ENST00000533998 POLR1AO95602 1720 aaPredicted RBP38.55■■■■□ 3.76
FNTA-214ENST00000533998 ANKLE2Q86XL3 938 aa38.54■■■■□ 3.76
FNTA-214ENST00000533998 UBR1Q8IWV7 1749 aa38.51■■■■□ 3.76
FNTA-214ENST00000533998 TET3O43151 1660 aa38.5■■■■□ 3.75
FNTA-214ENST00000533998 RPRD2Q5VT52 1461 aaKnown RBP38.48■■■■□ 3.75
FNTA-214ENST00000533998 NEURL4Q96JN8 1562 aa38.48■■■■□ 3.75
FNTA-214ENST00000533998 NOS1P29475 1434 aa38.47■■■■□ 3.75
FNTA-214ENST00000533998 GCC2Q8IWJ2 1684 aa38.46■■■■□ 3.75
FNTA-214ENST00000533998 LTBP4Q8N2S1 1624 aa38.45■■■■□ 3.75
FNTA-214ENST00000533998 SYNMO15061 1565 aa38.43■■■■□ 3.74
FNTA-214ENST00000533998 PIK3C2BO00750 1634 aa38.42■■■■□ 3.74
FNTA-214ENST00000533998 IQGAP3Q86VI3 1631 aa38.42■■■■□ 3.74
FNTA-214ENST00000533998 IDI1Q13907 227 aa38.42■■■■□ 3.74
FNTA-214ENST00000533998 MED14O60244 1454 aa38.41■■■■□ 3.74
FNTA-214ENST00000533998 NUP155O75694 1391 aa38.41■■■■□ 3.74
FNTA-214ENST00000533998 ZNF335Q9H4Z2 1342 aaPredicted RBP38.38■■■■□ 3.74
FNTA-214ENST00000533998 SLC52A1Q9NWF4 448 aa38.38■■■■□ 3.73
FNTA-214ENST00000533998 KDM5AP29375 1690 aaKnown RBP38.38■■■■□ 3.73
FNTA-214ENST00000533998 NPHP4O75161 1426 aaPredicted RBP38.37■■■■□ 3.73
FNTA-214ENST00000533998 STAG3Q9UJ98 1225 aa38.36■■■■□ 3.73
FNTA-214ENST00000533998 NAIPQ13075 1403 aa38.36■■■■□ 3.73
FNTA-214ENST00000533998 SLIT1O75093 1534 aa38.35■■■■□ 3.73
FNTA-214ENST00000533998 E9PCH4 1651 aa38.35■■■■□ 3.73
FNTA-214ENST00000533998 ARHGAP23Q9P227 1491 aa38.35■■■■□ 3.73
FNTA-214ENST00000533998 IQGAP1P46940 1657 aa38.31■■■■□ 3.72
FNTA-214ENST00000533998 SCAF11Q99590 1463 aaKnown RBP38.28■■■■□ 3.72
FNTA-214ENST00000533998 LTKP29376 864 aa38.28■■■■□ 3.72
FNTA-214ENST00000533998 TXNDC2Q86VQ3 553 aa38.28■■■■□ 3.72
FNTA-214ENST00000533998 TMEM2Q9UHN6 1383 aa38.28■■■■□ 3.72
FNTA-214ENST00000533998 HFM1A2PYH4 1435 aa38.28■■■■□ 3.72
FNTA-214ENST00000533998 EID1Q9Y6B2 187 aa38.26■■■■□ 3.72
FNTA-214ENST00000533998 IQSEC2Q5JU85 1478 aa38.26■■■■□ 3.72
FNTA-214ENST00000533998 ADGRB3O60242 1522 aa38.24■■■■□ 3.71
FNTA-214ENST00000533998 MYO5BQ9ULV0 1848 aa38.15■■■■□ 3.7
FNTA-214ENST00000533998 CPS1P31327 1500 aa38.14■■■■□ 3.7
FNTA-214ENST00000533998 TMEM131LA2VDJ0 1609 aa38.13■■■■□ 3.69
FNTA-214ENST00000533998 TRIM52Q96A61 297 aa38.09■■■■□ 3.69
FNTA-214ENST00000533998 SPHKAPQ2M3C7 1700 aa38.08■■■■□ 3.69
FNTA-214ENST00000533998 CHGAP10645 457 aaKnown RBP38.06■■■■□ 3.68
FNTA-214ENST00000533998 HDGFP51858 240 aaKnown RBP38.05■■■■□ 3.68
FNTA-214ENST00000533998 ZFYVE9O95405 1425 aa38.04■■■■□ 3.68
FNTA-214ENST00000533998 STRCP1A6NGW2 1772 aa38.03■■■■□ 3.68
FNTA-214ENST00000533998 RIMS2Q9UQ26 1411 aa38.01■■■■□ 3.68
FNTA-214ENST00000533998 ABCF1Q8NE71 845 aaKnown RBP eCLIP37.96■■■■□ 3.67
FNTA-214ENST00000533998 SLC4A1APQ9BWU0 796 aaKnown RBP37.96■■■■□ 3.67
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms