RNA–Protein interactions for RNA: ENST00000533908.5

UBXN1-216, Transcript of UBX domain protein 1, humanhuman

TSL 1 (best)

Gene UBXN1, Length 739 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-216ENST00000533908 KANK4Q5T7N3 995 aaPredicted RBP28.75■■■□□ 2.19
UBXN1-216ENST00000533908 DNMT1P26358 1616 aaKnown RBP28.75■■■□□ 2.19
UBXN1-216ENST00000533908 LRRC9Q6ZRR7 1453 aa28.74■■■□□ 2.19
UBXN1-216ENST00000533908 VPS8Q8N3P4 1428 aa28.74■■■□□ 2.19
UBXN1-216ENST00000533908 WASHC2CQ9Y4E1 1318 aa28.73■■■□□ 2.19
UBXN1-216ENST00000533908 ARHGEF5Q12774 1597 aa28.73■■■□□ 2.19
UBXN1-216ENST00000533908 TSPY4P0CV99 314 aa28.72■■■□□ 2.19
UBXN1-216ENST00000533908 TSPY10P0CW01 314 aa28.72■■■□□ 2.19
UBXN1-216ENST00000533908 TNRQ92752 1358 aa28.72■■■□□ 2.19
UBXN1-216ENST00000533908 ILDR2Q71H61 639 aa28.71■■■□□ 2.19
UBXN1-216ENST00000533908 DISP3Q9P2K9 1392 aa28.71■■■□□ 2.19
UBXN1-216ENST00000533908 KDM5DQ9BY66 1539 aa28.7■■■□□ 2.19
UBXN1-216ENST00000533908 PZPP20742 1482 aa28.7■■■□□ 2.18
UBXN1-216ENST00000533908 FAM135AQ9P2D6 1515 aa28.64■■■□□ 2.18
UBXN1-216ENST00000533908 MIA2Q96PC5 1412 aa28.64■■■□□ 2.18
UBXN1-216ENST00000533908 UBAP1LF5GYI3 381 aa28.64■■■□□ 2.18
UBXN1-216ENST00000533908 NEURL4Q96JN8 1562 aa28.62■■■□□ 2.17
UBXN1-216ENST00000533908 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.61■■■□□ 2.17
UBXN1-216ENST00000533908 MAP3K1Q13233 1512 aa28.59■■■□□ 2.17
UBXN1-216ENST00000533908 MAST1Q9Y2H9 1570 aa28.59■■■□□ 2.17
UBXN1-216ENST00000533908 THEMISQ8N1K5 641 aaPredicted RBP28.57■■■□□ 2.16
UBXN1-216ENST00000533908 POLR1AO95602 1720 aaPredicted RBP28.56■■■□□ 2.16
UBXN1-216ENST00000533908 MYOM3Q5VTT5 1437 aa28.56■■■□□ 2.16
UBXN1-216ENST00000533908 ANKLE2Q86XL3 938 aa28.56■■■□□ 2.16
UBXN1-216ENST00000533908 RNF17Q9BXT8 1623 aaKnown RBP28.55■■■□□ 2.16
UBXN1-216ENST00000533908 NLRP1Q9C000 1473 aa28.55■■■□□ 2.16
UBXN1-216ENST00000533908 ABCC3O15438 1527 aa28.54■■■□□ 2.16
UBXN1-216ENST00000533908 UGGT1Q9NYU2 1555 aa28.53■■■□□ 2.16
UBXN1-216ENST00000533908 SPATA31D1Q6ZQQ2 1576 aa28.52■■■□□ 2.16
UBXN1-216ENST00000533908 MROH1Q8NDA8 1641 aa28.51■■■□□ 2.15
UBXN1-216ENST00000533908 SHANK2Q9UPX8 1470 aa28.51■■■□□ 2.15
UBXN1-216ENST00000533908 EIF2AK4Q9P2K8 1649 aaKnown RBP28.47■■■□□ 2.15
UBXN1-216ENST00000533908 MED14O60244 1454 aa28.47■■■□□ 2.15
UBXN1-216ENST00000533908 VWDEQ8N2E2 1590 aa28.46■■■□□ 2.15
UBXN1-216ENST00000533908 NPHP4O75161 1426 aaPredicted RBP28.46■■■□□ 2.15
UBXN1-216ENST00000533908 ERVK-7P63135 1459 aa28.46■■■□□ 2.15
UBXN1-216ENST00000533908 SOCS7O14512 581 aa28.45■■■□□ 2.14
UBXN1-216ENST00000533908 ZC3H13Q5T200 1668 aaKnown RBP28.45■■■□□ 2.14
UBXN1-216ENST00000533908 ABCC5O15440 1437 aa28.44■■■□□ 2.14
UBXN1-216ENST00000533908 CPS1P31327 1500 aa28.44■■■□□ 2.14
UBXN1-216ENST00000533908 DEPDC5O75140 1603 aa28.43■■■□□ 2.14
UBXN1-216ENST00000533908 DUOX2Q9NRD8 1548 aa28.43■■■□□ 2.14
UBXN1-216ENST00000533908 RRP7BPQ9NSQ0 103 aa28.42■■■□□ 2.14
UBXN1-216ENST00000533908 CEP152O94986 1710 aa28.42■■■□□ 2.14
UBXN1-216ENST00000533908 PIP4K2BP78356 416 aa28.41■■■□□ 2.14
UBXN1-216ENST00000533908 CFAP65Q6ZU64 1925 aaKnown RBP28.41■■■□□ 2.14
UBXN1-216ENST00000533908 KIF15Q9NS87 1388 aa28.39■■■□□ 2.14
UBXN1-216ENST00000533908 HSPA1LP34931 641 aa28.39■■■□□ 2.14
UBXN1-216ENST00000533908 TOM1O60784 492 aa28.38■■■□□ 2.13
UBXN1-216ENST00000533908 SCAF1Q9H7N4 1312 aaKnown RBP28.38■■■□□ 2.13
UBXN1-216ENST00000533908 PTPN23Q9H3S7 1636 aa28.36■■■□□ 2.13
UBXN1-216ENST00000533908 IQGAP1P46940 1657 aa28.35■■■□□ 2.13
UBXN1-216ENST00000533908 STRCP1A6NGW2 1772 aa28.34■■■□□ 2.13
UBXN1-216ENST00000533908 ALKQ9UM73 1620 aa28.33■■■□□ 2.13
UBXN1-216ENST00000533908 CROCC2H7BZ55 1655 aa28.33■■■□□ 2.13
UBXN1-216ENST00000533908 LTKP29376 864 aa28.33■■■□□ 2.13
UBXN1-216ENST00000533908 APLP2Q06481 763 aa28.33■■■□□ 2.13
UBXN1-216ENST00000533908 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.33■■■□□ 2.13
UBXN1-216ENST00000533908 DAPK1P53355 1430 aa28.33■■■□□ 2.13
UBXN1-216ENST00000533908 UBR1Q8IWV7 1749 aa28.32■■■□□ 2.12
UBXN1-216ENST00000533908 ARHGAP31Q2M1Z3 1444 aa28.32■■■□□ 2.12
UBXN1-216ENST00000533908 ERBINQ96RT1 1412 aa28.32■■■□□ 2.12
UBXN1-216ENST00000533908 PRDM15P57071 1507 aaPredicted RBP28.32■■■□□ 2.12
UBXN1-216ENST00000533908 FGD6Q6ZV73 1430 aa28.3■■■□□ 2.12
UBXN1-216ENST00000533908 CHIC2Q9UKJ5 165 aa28.3■■■□□ 2.12
UBXN1-216ENST00000533908 LRRC7Q96NW7 1537 aa28.28■■■□□ 2.12
UBXN1-216ENST00000533908 TXNDC2Q86VQ3 553 aa28.27■■■□□ 2.12
UBXN1-216ENST00000533908 ARHGAP23Q9P227 1491 aa28.27■■■□□ 2.12
UBXN1-216ENST00000533908 SCAF11Q99590 1463 aaKnown RBP28.26■■■□□ 2.11
UBXN1-216ENST00000533908 SLIT1O75093 1534 aa28.23■■■□□ 2.11
UBXN1-216ENST00000533908 ANKRD30AQ9BXX3 1397 aa28.21■■■□□ 2.11
UBXN1-216ENST00000533908 PIK3C2BO00750 1634 aa28.2■■■□□ 2.1
UBXN1-216ENST00000533908 IDI1Q13907 227 aa28.19■■■□□ 2.1
UBXN1-216ENST00000533908 KANK1Q14678 1352 aa28.19■■■□□ 2.1
UBXN1-216ENST00000533908 MED1Q15648 1581 aaPredicted RBP28.16■■■□□ 2.1
UBXN1-216ENST00000533908 TMEM2Q9UHN6 1383 aa28.16■■■□□ 2.1
UBXN1-216ENST00000533908 EID1Q9Y6B2 187 aa28.16■■■□□ 2.1
UBXN1-216ENST00000533908 LMTK2Q8IWU2 1503 aa28.16■■■□□ 2.1
UBXN1-216ENST00000533908 SENP3Q9H4L4 574 aaPredicted RBP28.15■■■□□ 2.1
UBXN1-216ENST00000533908 SYNMO15061 1565 aa28.13■■■□□ 2.09
UBXN1-216ENST00000533908 STAG3Q9UJ98 1225 aa28.12■■■□□ 2.09
UBXN1-216ENST00000533908 FAM50AQ14320 339 aaKnown RBP28.1■■■□□ 2.09
UBXN1-216ENST00000533908 NOS1P29475 1434 aa28.09■■■□□ 2.09
UBXN1-216ENST00000533908 ADGRL2O95490 1459 aa28.09■■■□□ 2.09
UBXN1-216ENST00000533908 XIRP1Q702N8 1843 aaKnown RBP28.08■■■□□ 2.09
UBXN1-216ENST00000533908 EFCAB6Q5THR3 1501 aa28.08■■■□□ 2.08
UBXN1-216ENST00000533908 KDM5AP29375 1690 aaKnown RBP28.05■■■□□ 2.08
UBXN1-216ENST00000533908 SLC26A8Q96RN1 970 aa28.05■■■□□ 2.08
UBXN1-216ENST00000533908 TET3O43151 1660 aa28.03■■■□□ 2.08
UBXN1-216ENST00000533908 ANKRD50Q9ULJ7 1429 aa28.01■■■□□ 2.08
UBXN1-216ENST00000533908 KCNA6P17658 529 aa28.01■■■□□ 2.07
UBXN1-216ENST00000533908 RBM33Q96EV2 1170 aaKnown RBP28■■■□□ 2.07
UBXN1-216ENST00000533908 SLC52A1Q9NWF4 448 aa28■■■□□ 2.07
UBXN1-216ENST00000533908 TMEM94Q12767 1356 aa27.98■■■□□ 2.07
UBXN1-216ENST00000533908 ADGRB3O60242 1522 aa27.97■■■□□ 2.07
UBXN1-216ENST00000533908 PROSER2Q86WR7 435 aaPredicted RBP27.94■■■□□ 2.06
UBXN1-216ENST00000533908 PHF23Q9BUL5 403 aaPredicted RBP27.94■■■□□ 2.06
UBXN1-216ENST00000533908 RPRD2Q5VT52 1461 aaKnown RBP27.93■■■□□ 2.06
UBXN1-216ENST00000533908 FAM135BQ49AJ0 1406 aa27.92■■■□□ 2.06
UBXN1-216ENST00000533908 ZFYVE9O95405 1425 aa27.9■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms