RNA–Protein interactions for RNA: ENST00000533865.5

CTSC-207, Transcript of cathepsin C, humanhuman

TSL 4

Gene CTSC, Length 542 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-207ENST00000533865 CCDC18Q5T9S5 1454 aa17.24■□□□□ 0.35
CTSC-207ENST00000533865 KIAA1107Q9UPP5 1409 aa17.24■□□□□ 0.35
CTSC-207ENST00000533865 IQGAP1P46940 1657 aa17.23■□□□□ 0.35
CTSC-207ENST00000533865 SYNMO15061 1565 aa17.23■□□□□ 0.35
CTSC-207ENST00000533865 TNRQ92752 1358 aa17.22■□□□□ 0.35
CTSC-207ENST00000533865 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.22■□□□□ 0.358e-9■□□□□ 8.6
CTSC-207ENST00000533865 NPHP4O75161 1426 aaPredicted RBP17.21■□□□□ 0.35
CTSC-207ENST00000533865 CASKIN1Q8WXD9 1431 aa17.21■□□□□ 0.35
CTSC-207ENST00000533865 XIRP1Q702N8 1843 aaKnown RBP17.21■□□□□ 0.35
CTSC-207ENST00000533865 FBXO31Q5XUX0 539 aaPredicted RBP17.21■□□□□ 0.35
CTSC-207ENST00000533865 ZNF777Q9ULD5 760 aaPredicted RBP17.21■□□□□ 0.35
CTSC-207ENST00000533865 PZPP20742 1482 aa17.2■□□□□ 0.34
CTSC-207ENST00000533865 ANKLE2Q86XL3 938 aa17.2■□□□□ 0.34
CTSC-207ENST00000533865 SRCAPQ6ZRS2 3230 aa17.19■□□□□ 0.34
CTSC-207ENST00000533865 SENP3Q9H4L4 574 aaPredicted RBP17.19■□□□□ 0.34
CTSC-207ENST00000533865 PLEKHH2Q8IVE3 1493 aa17.18■□□□□ 0.34
CTSC-207ENST00000533865 ZC3H13Q5T200 1668 aaKnown RBP17.18■□□□□ 0.34
CTSC-207ENST00000533865 LOC105371045A0A1W2PR82 267 aa17.18■□□□□ 0.34
CTSC-207ENST00000533865 POTEAQ6S8J7 498 aa17.18■□□□□ 0.34
CTSC-207ENST00000533865 SETD1AO15047 1707 aaKnown RBP17.18■□□□□ 0.34
CTSC-207ENST00000533865 UGGT1Q9NYU2 1555 aa17.17■□□□□ 0.34
CTSC-207ENST00000533865 FAM135AQ9P2D6 1515 aa17.16■□□□□ 0.34
CTSC-207ENST00000533865 NLRP1Q9C000 1473 aa17.16■□□□□ 0.34
CTSC-207ENST00000533865 THEMISQ8N1K5 641 aaPredicted RBP17.15■□□□□ 0.34
CTSC-207ENST00000533865 KDM5DQ9BY66 1539 aa17.15■□□□□ 0.34
CTSC-207ENST00000533865 EHMT2Q96KQ7 1210 aa17.14■□□□□ 0.33
CTSC-207ENST00000533865 MIA2Q96PC5 1412 aa17.13■□□□□ 0.33
CTSC-207ENST00000533865 MBD5Q9P267 1494 aa17.12■□□□□ 0.33
CTSC-207ENST00000533865 DHX29Q7Z478 1369 aaKnown RBP17.12■□□□□ 0.33
CTSC-207ENST00000533865 RTEL1-TNFRSF6BF6WH68 1400 aa17.11■□□□□ 0.33
CTSC-207ENST00000533865 FYCO1Q9BQS8 1478 aa17.11■□□□□ 0.33
CTSC-207ENST00000533865 CFDP1Q9UEE9 299 aaPredicted RBP17.1■□□□□ 0.33
CTSC-207ENST00000533865 CEP162Q5TB80 1403 aa17.09■□□□□ 0.33
CTSC-207ENST00000533865 FAM135BQ49AJ0 1406 aa17.06■□□□□ 0.32
CTSC-207ENST00000533865 ZNF644Q9H582 1327 aaPredicted RBP17.06■□□□□ 0.32
CTSC-207ENST00000533865 UBR1Q8IWV7 1749 aa17.06■□□□□ 0.32
CTSC-207ENST00000533865 KIF3BO15066 747 aa17.05■□□□□ 0.32
CTSC-207ENST00000533865 TIAM1Q13009 1591 aa17.05■□□□□ 0.32
CTSC-207ENST00000533865 CCNB3Q8WWL7 1395 aa17.04■□□□□ 0.32
CTSC-207ENST00000533865 CFAP65Q6ZU64 1925 aaKnown RBP17.03■□□□□ 0.32
CTSC-207ENST00000533865 ROBO1Q9Y6N7 1651 aa17.03■□□□□ 0.32
CTSC-207ENST00000533865 WASHC2CQ9Y4E1 1318 aa17.02■□□□□ 0.32
CTSC-207ENST00000533865 SCAF11Q99590 1463 aaKnown RBP16.99■□□□□ 0.31
CTSC-207ENST00000533865 ARHGAP23Q9P227 1491 aa16.99■□□□□ 0.31
CTSC-207ENST00000533865 NCOA2Q15596 1464 aa16.99■□□□□ 0.31
CTSC-207ENST00000533865 ABCC3O15438 1527 aa16.98■□□□□ 0.31
CTSC-207ENST00000533865 SLIT1O75093 1534 aa16.98■□□□□ 0.31
CTSC-207ENST00000533865 ERVK-7P63135 1459 aa16.98■□□□□ 0.31
CTSC-207ENST00000533865 LTKP29376 864 aa16.96■□□□□ 0.31
CTSC-207ENST00000533865 UPF1Q92900 1129 aaKnown RBP eCLIP16.96■□□□□ 0.311e-7■■■■□ 22.7
CTSC-207ENST00000533865 CCDC141Q6ZP82 1450 aa16.96■□□□□ 0.31
CTSC-207ENST00000533865 MAP3K1Q13233 1512 aa16.96■□□□□ 0.3
CTSC-207ENST00000533865 MROH1Q8NDA8 1641 aa16.94■□□□□ 0.3
CTSC-207ENST00000533865 CEP152O94986 1710 aa16.93■□□□□ 0.3
CTSC-207ENST00000533865 PHLPP1O60346 1717 aa16.92■□□□□ 0.3
CTSC-207ENST00000533865 TMEM94Q12767 1356 aa16.91■□□□□ 0.3
CTSC-207ENST00000533865 MTUS2Q5JR59 1369 aa16.91■□□□□ 0.3
CTSC-207ENST00000533865 VPS8Q8N3P4 1428 aa16.89■□□□□ 0.29
CTSC-207ENST00000533865 CAMSAP2Q08AD1 1489 aa16.89■□□□□ 0.29
CTSC-207ENST00000533865 EHBP1L1Q8N3D4 1523 aa16.89■□□□□ 0.29
CTSC-207ENST00000533865 ARHGEF5Q12774 1597 aa16.89■□□□□ 0.29
CTSC-207ENST00000533865 COL16A1Q07092 1604 aaPredicted RBP16.88■□□□□ 0.29
CTSC-207ENST00000533865 EIF2AK4Q9P2K8 1649 aaKnown RBP16.88■□□□□ 0.29
CTSC-207ENST00000533865 LRRC9Q6ZRR7 1453 aa16.88■□□□□ 0.29
CTSC-207ENST00000533865 TXNDC2Q86VQ3 553 aa16.88■□□□□ 0.29
CTSC-207ENST00000533865 LRP6O75581 1613 aa16.88■□□□□ 0.29
CTSC-207ENST00000533865 JCADQ9P266 1359 aa16.87■□□□□ 0.29
CTSC-207ENST00000533865 PIK3C2BO00750 1634 aa16.86■□□□□ 0.29
CTSC-207ENST00000533865 TET3O43151 1660 aa16.86■□□□□ 0.29
CTSC-207ENST00000533865 PRDM15P57071 1507 aaPredicted RBP16.85■□□□□ 0.29
CTSC-207ENST00000533865 NWD1Q149M9 1564 aa16.85■□□□□ 0.29
CTSC-207ENST00000533865 RSPH4AQ5TD94 716 aa16.84■□□□□ 0.29
CTSC-207ENST00000533865 KDM5AP29375 1690 aaKnown RBP16.84■□□□□ 0.29
CTSC-207ENST00000533865 KCNA6P17658 529 aa16.83■□□□□ 0.28
CTSC-207ENST00000533865 MAST1Q9Y2H9 1570 aa16.83■□□□□ 0.28
CTSC-207ENST00000533865 TMEM2Q9UHN6 1383 aa16.82■□□□□ 0.28
CTSC-207ENST00000533865 RBM33Q96EV2 1170 aaKnown RBP16.82■□□□□ 0.28
CTSC-207ENST00000533865 NKTRP30414 1462 aaKnown RBP16.81■□□□□ 0.28
CTSC-207ENST00000533865 ARHGAP31Q2M1Z3 1444 aa16.8■□□□□ 0.28
CTSC-207ENST00000533865 TRIM52Q96A61 297 aa16.8■□□□□ 0.28
CTSC-207ENST00000533865 SHPRHQ149N8 1683 aa16.8■□□□□ 0.28
CTSC-207ENST00000533865 APLP2Q06481 763 aa16.79■□□□□ 0.28
CTSC-207ENST00000533865 PROSER2Q86WR7 435 aaPredicted RBP16.79■□□□□ 0.28
CTSC-207ENST00000533865 EID1Q9Y6B2 187 aa16.79■□□□□ 0.28
CTSC-207ENST00000533865 CDK12Q9NYV4 1490 aaPredicted RBP16.79■□□□□ 0.28
CTSC-207ENST00000533865 CHD2O14647 1828 aaKnown RBP16.78■□□□□ 0.28
CTSC-207ENST00000533865 SLAIN2Q9P270 581 aa16.78■□□□□ 0.28
CTSC-207ENST00000533865 FGD6Q6ZV73 1430 aa16.78■□□□□ 0.28
CTSC-207ENST00000533865 ZNF772Q68DY9 489 aaPredicted RBP16.77■□□□□ 0.28
CTSC-207ENST00000533865 SPATA31A6Q5VVP1 1343 aa16.76■□□□□ 0.27
CTSC-207ENST00000533865 EFCAB6Q5THR3 1501 aa16.75■□□□□ 0.27
CTSC-207ENST00000533865 SLC26A8Q96RN1 970 aa16.75■□□□□ 0.27
CTSC-207ENST00000533865 MSH6P52701 1360 aa16.75■□□□□ 0.27
CTSC-207ENST00000533865 AHDC1Q5TGY3 1603 aaPredicted RBP16.74■□□□□ 0.27
CTSC-207ENST00000533865 TSPY4P0CV99 314 aa16.74■□□□□ 0.27
CTSC-207ENST00000533865 TSPY10P0CW01 314 aa16.74■□□□□ 0.27
CTSC-207ENST00000533865 EP400Q96L91 3159 aa16.74■□□□□ 0.27
CTSC-207ENST00000533865 DIP2AQ14689 1571 aa16.72■□□□□ 0.27
CTSC-207ENST00000533865 RXRBP28702 533 aa16.71■□□□□ 0.27
CTSC-207ENST00000533865 DUOX2Q9NRD8 1548 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms