RNA–Protein interactions for RNA: ENST00000533834.1

RNPC3-209, Transcript of RNA binding region (RNP1, RRM) containing 3, humanhuman

TSL 1 (best)

Gene RNPC3, Length 3,658 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNPC3-209ENST00000533834 CHIC2Q9UKJ5 165 aa10.25□□□□□ -0.77
RNPC3-209ENST00000533834 ZC3H13Q5T200 1668 aaKnown RBP10.24□□□□□ -0.77
RNPC3-209ENST00000533834 DDX10Q13206 875 aaKnown RBP10.24□□□□□ -0.77
RNPC3-209ENST00000533834 TET3O43151 1660 aa10.24□□□□□ -0.77
RNPC3-209ENST00000533834 GPRASP1Q5JY77 1395 aa10.23□□□□□ -0.77
RNPC3-209ENST00000533834 KIDINS220Q9ULH0 1771 aa10.23□□□□□ -0.77
RNPC3-209ENST00000533834 A2MP01023 1474 aa10.23□□□□□ -0.77
RNPC3-209ENST00000533834 PELP1Q8IZL8 1130 aaKnown RBP10.23□□□□□ -0.77
RNPC3-209ENST00000533834 HIRIP3Q9BW71 556 aaPredicted RBP10.23□□□□□ -0.77
RNPC3-209ENST00000533834 ERBINQ96RT1 1412 aa10.23□□□□□ -0.77
RNPC3-209ENST00000533834 CLTCL1P53675 1640 aa10.23□□□□□ -0.77
RNPC3-209ENST00000533834 MROH2AA6NES4 1674 aa10.23□□□□□ -0.77
RNPC3-209ENST00000533834 ANKRD30AQ9BXX3 1397 aa10.22□□□□□ -0.77
RNPC3-209ENST00000533834 TRPM2O94759 1503 aa10.22□□□□□ -0.77
RNPC3-209ENST00000533834 MYO3AQ8NEV4 1616 aa10.22□□□□□ -0.77
RNPC3-209ENST00000533834 CHMP7Q8WUX9 453 aaPredicted RBP10.22□□□□□ -0.77
RNPC3-209ENST00000533834 PLCH2O75038 1416 aa10.22□□□□□ -0.77
RNPC3-209ENST00000533834 PRAG1Q86YV5 1406 aa10.21□□□□□ -0.77
RNPC3-209ENST00000533834 FRMPD1Q5SYB0 1578 aa10.2□□□□□ -0.78
RNPC3-209ENST00000533834 CCDC184Q52MB2 194 aa10.2□□□□□ -0.78
RNPC3-209ENST00000533834 KIF7Q2M1P5 1343 aa10.19□□□□□ -0.78
RNPC3-209ENST00000533834 PTPRTO14522 1441 aa10.19□□□□□ -0.78
RNPC3-209ENST00000533834 WDR7Q9Y4E6 1490 aa10.19□□□□□ -0.78
RNPC3-209ENST00000533834 KIF15Q9NS87 1388 aa10.19□□□□□ -0.78
RNPC3-209ENST00000533834 PLEKHH2Q8IVE3 1493 aa10.18□□□□□ -0.78
RNPC3-209ENST00000533834 ARHGAP5Q13017 1502 aa10.18□□□□□ -0.78
RNPC3-209ENST00000533834 PPRC1Q5VV67 1664 aaKnown RBP10.17□□□□□ -0.78
RNPC3-209ENST00000533834 RTEL1-TNFRSF6BF6WH68 1400 aa10.17□□□□□ -0.78
RNPC3-209ENST00000533834 CFDP1Q9UEE9 299 aaPredicted RBP10.17□□□□□ -0.78
RNPC3-209ENST00000533834 SIGLEC1Q9BZZ2 1709 aa10.17□□□□□ -0.78
RNPC3-209ENST00000533834 LMTK2Q8IWU2 1503 aa10.17□□□□□ -0.78
RNPC3-209ENST00000533834 ARID3CA6NKF2 412 aa10.16□□□□□ -0.78
RNPC3-209ENST00000533834 NRXN1Q9ULB1 1477 aa10.16□□□□□ -0.78
RNPC3-209ENST00000533834 PIK3C2BO00750 1634 aa10.16□□□□□ -0.78
RNPC3-209ENST00000533834 CDK11AQ9UQ88 783 aaPredicted RBP10.16□□□□□ -0.78
RNPC3-209ENST00000533834 ZMYM4Q5VZL5 1548 aa10.16□□□□□ -0.78
RNPC3-209ENST00000533834 COL17A1Q9UMD9 1497 aaPredicted RBP10.15□□□□□ -0.78
RNPC3-209ENST00000533834 TRAPPC8Q9Y2L5 1435 aa10.15□□□□□ -0.78
RNPC3-209ENST00000533834 PPLO60437 1756 aa10.14□□□□□ -0.79
RNPC3-209ENST00000533834 ZNF518AQ6AHZ1 1483 aa10.14□□□□□ -0.79
RNPC3-209ENST00000533834 LRPPRCP42704 1394 aaKnown RBP10.14□□□□□ -0.79
RNPC3-209ENST00000533834 ARID4BQ4LE39 1312 aaPredicted RBP10.14□□□□□ -0.79
RNPC3-209ENST00000533834 ABCA6Q8N139 1617 aa10.14□□□□□ -0.79
RNPC3-209ENST00000533834 ATP7AQ04656 1500 aa10.13□□□□□ -0.79
RNPC3-209ENST00000533834 USP47Q96K76 1375 aa10.13□□□□□ -0.79
RNPC3-209ENST00000533834 PRKRIP1Q9H875 184 aaPredicted RBP10.13□□□□□ -0.79
RNPC3-209ENST00000533834 EFCAB6Q5THR3 1501 aa10.12□□□□□ -0.79
RNPC3-209ENST00000533834 RICTORQ6R327 1708 aa10.12□□□□□ -0.79
RNPC3-209ENST00000533834 RNF39Q9H2S5 420 aa10.11□□□□□ -0.79
RNPC3-209ENST00000533834 MAP3K4Q9Y6R4 1608 aa10.11□□□□□ -0.79
RNPC3-209ENST00000533834 EIF4G2P78344 907 aaKnown RBP eCLIP10.11□□□□□ -0.79
RNPC3-209ENST00000533834 RNF123Q5XPI4 1314 aa10.11□□□□□ -0.79
RNPC3-209ENST00000533834 HECW2Q9P2P5 1572 aa10.1□□□□□ -0.79
RNPC3-209ENST00000533834 PKD2Q13563 968 aa10.1□□□□□ -0.79
RNPC3-209ENST00000533834 SLC4A1APQ9BWU0 796 aaKnown RBP10.1□□□□□ -0.79
RNPC3-209ENST00000533834 SYNMO15061 1565 aa10.1□□□□□ -0.79
RNPC3-209ENST00000533834 HNRNPMP52272 730 aaKnown RBP eCLIP10.09□□□□□ -0.79
RNPC3-209ENST00000533834 NUP155O75694 1391 aa10.09□□□□□ -0.79
RNPC3-209ENST00000533834 TSHZ2Q9NRE2 1034 aa10.09□□□□□ -0.79
RNPC3-209ENST00000533834 ADGRB3O60242 1522 aa10.09□□□□□ -0.79
RNPC3-209ENST00000533834 PLEKHD1A6NEE1 506 aa10.09□□□□□ -0.79
RNPC3-209ENST00000533834 KIF1BO60333 1816 aa10.08□□□□□ -0.8
RNPC3-209ENST00000533834 CFAP74Q9C0B2 1584 aa10.08□□□□□ -0.8
RNPC3-209ENST00000533834 SCAPERQ9BY12 1400 aa10.08□□□□□ -0.8
RNPC3-209ENST00000533834 RSPH4AQ5TD94 716 aa10.08□□□□□ -0.8
RNPC3-209ENST00000533834 MYOM2P54296 1465 aa10.07□□□□□ -0.8
RNPC3-209ENST00000533834 PARD3Q8TEW0 1356 aa10.07□□□□□ -0.8
RNPC3-209ENST00000533834 SETBP1Q9Y6X0 1596 aa10.07□□□□□ -0.8
RNPC3-209ENST00000533834 SHPRHQ149N8 1683 aa10.06□□□□□ -0.8
RNPC3-209ENST00000533834 POTEHQ6S545 545 aa10.06□□□□□ -0.8
RNPC3-209ENST00000533834 TRIM52Q96A61 297 aa10.06□□□□□ -0.8
RNPC3-209ENST00000533834 INSRP06213 1382 aa10.06□□□□□ -0.8
RNPC3-209ENST00000533834 USP32Q8NFA0 1604 aa10.06□□□□□ -0.8
RNPC3-209ENST00000533834 ANP32CO43423 234 aa10.05□□□□□ -0.8
RNPC3-209ENST00000533834 TESK2Q96S53 571 aa10.05□□□□□ -0.8
RNPC3-209ENST00000533834 CAMSAP1Q5T5Y3 1602 aa10.05□□□□□ -0.8
RNPC3-209ENST00000533834 PER1O15534 1290 aaPredicted RBP10.05□□□□□ -0.8
RNPC3-209ENST00000533834 ADGRB1O14514 1584 aa10.05□□□□□ -0.8
RNPC3-209ENST00000533834 SMG6Q86US8 1419 aaKnown RBP10.04□□□□□ -0.8
RNPC3-209ENST00000533834 UGGT1Q9NYU2 1555 aa10.04□□□□□ -0.8
RNPC3-209ENST00000533834 SETD1AO15047 1707 aaKnown RBP10.04□□□□□ -0.8
RNPC3-209ENST00000533834 ZBED9Q6R2W3 1325 aa10.04□□□□□ -0.8
RNPC3-209ENST00000533834 BLMP54132 1417 aaPredicted RBP10.03□□□□□ -0.8
RNPC3-209ENST00000533834 ARHGEF28Q8N1W1 1705 aaKnown RBP10.02□□□□□ -0.8
RNPC3-209ENST00000533834 DISP3Q9P2K9 1392 aa10.02□□□□□ -0.81
RNPC3-209ENST00000533834 FANCAO15360 1455 aa10.02□□□□□ -0.81
RNPC3-209ENST00000533834 ROCK2O75116 1388 aaKnown RBP10.02□□□□□ -0.81
RNPC3-209ENST00000533834 KDM5AP29375 1690 aaKnown RBP10.02□□□□□ -0.81
RNPC3-209ENST00000533834 DIP2CQ9Y2E4 1556 aa10.02□□□□□ -0.81
RNPC3-209ENST00000533834 KTN1Q86UP2 1357 aaKnown RBP10.01□□□□□ -0.81
RNPC3-209ENST00000533834 MYO5BQ9ULV0 1848 aa10.01□□□□□ -0.81
RNPC3-209ENST00000533834 FBLN2P98095 1184 aa10.01□□□□□ -0.81
RNPC3-209ENST00000533834 CCDC144AA2RUR9 1427 aa10□□□□□ -0.81
RNPC3-209ENST00000533834 MLH3Q9UHC1 1453 aa10□□□□□ -0.81
RNPC3-209ENST00000533834 GLI2P10070 1586 aa10□□□□□ -0.81
RNPC3-209ENST00000533834 QRICH2Q9H0J4 1663 aa9.99□□□□□ -0.81
RNPC3-209ENST00000533834 ASXL2Q76L83 1435 aa9.99□□□□□ -0.81
RNPC3-209ENST00000533834 CLTCQ00610 1675 aaKnown RBP9.99□□□□□ -0.81
RNPC3-209ENST00000533834 PNISRQ8TF01 805 aaKnown RBP9.98□□□□□ -0.81
RNPC3-209ENST00000533834 POGZQ7Z3K3 1410 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms