RNA–Protein interactions for RNA: ENST00000533827.5

VPS51-213, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 3

Gene VPS51, Length 1,078 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-213ENST00000533827 FAM135AQ9P2D6 1515 aa27.44■■□□□ 1.98
VPS51-213ENST00000533827 KDM5DQ9BY66 1539 aa27.42■■□□□ 1.98
VPS51-213ENST00000533827 CEP170BQ9Y4F5 1589 aaPredicted RBP27.41■■□□□ 1.98
VPS51-213ENST00000533827 APLP2Q06481 763 aa27.4■■□□□ 1.98
VPS51-213ENST00000533827 WASHC2CQ9Y4E1 1318 aa27.37■■□□□ 1.97
VPS51-213ENST00000533827 PZPP20742 1482 aa27.36■■□□□ 1.97
VPS51-213ENST00000533827 PLA2R1Q13018 1463 aa27.36■■□□□ 1.97
VPS51-213ENST00000533827 RNF17Q9BXT8 1623 aaKnown RBP27.34■■□□□ 1.97
VPS51-213ENST00000533827 EIF2AK4Q9P2K8 1649 aaKnown RBP27.34■■□□□ 1.97
VPS51-213ENST00000533827 FBXO31Q5XUX0 539 aaPredicted RBP27.33■■□□□ 1.97
VPS51-213ENST00000533827 PTPN23Q9H3S7 1636 aa27.33■■□□□ 1.97
VPS51-213ENST00000533827 A2ML1A8K2U0 1454 aa27.32■■□□□ 1.96
VPS51-213ENST00000533827 NCKAP5LQ9HCH0 1330 aa27.32■■□□□ 1.96
VPS51-213ENST00000533827 TCOF1Q13428 1488 aaKnown RBP27.32■■□□□ 1.96
VPS51-213ENST00000533827 DNMT1P26358 1616 aaKnown RBP27.31■■□□□ 1.96
VPS51-213ENST00000533827 LTBP4Q8N2S1 1624 aa27.3■■□□□ 1.96
VPS51-213ENST00000533827 PKD2Q13563 968 aa27.3■■□□□ 1.96
VPS51-213ENST00000533827 TNRQ92752 1358 aa27.3■■□□□ 1.96
VPS51-213ENST00000533827 ABCC5O15440 1437 aa27.3■■□□□ 1.96
VPS51-213ENST00000533827 CROCC2H7BZ55 1655 aa27.29■■□□□ 1.96
VPS51-213ENST00000533827 DUOX2Q9NRD8 1548 aa27.28■■□□□ 1.96
VPS51-213ENST00000533827 SHANK2Q9UPX8 1470 aa27.28■■□□□ 1.96
VPS51-213ENST00000533827 ZC3H13Q5T200 1668 aaKnown RBP27.27■■□□□ 1.96
VPS51-213ENST00000533827 MROH1Q8NDA8 1641 aa27.27■■□□□ 1.96
VPS51-213ENST00000533827 FGD6Q6ZV73 1430 aa27.27■■□□□ 1.96
VPS51-213ENST00000533827 ABCC3O15438 1527 aa27.26■■□□□ 1.96
VPS51-213ENST00000533827 DAPK1P53355 1430 aa27.24■■□□□ 1.95
VPS51-213ENST00000533827 KIF15Q9NS87 1388 aa27.22■■□□□ 1.95
VPS51-213ENST00000533827 NLRP1Q9C000 1473 aa27.19■■□□□ 1.94
VPS51-213ENST00000533827 IQSEC2Q5JU85 1478 aa27.19■■□□□ 1.94
VPS51-213ENST00000533827 SPATA31D1Q6ZQQ2 1576 aa27.18■■□□□ 1.94
VPS51-213ENST00000533827 ERBINQ96RT1 1412 aa27.18■■□□□ 1.94
VPS51-213ENST00000533827 RRP7BPQ9NSQ0 103 aa27.18■■□□□ 1.94
VPS51-213ENST00000533827 CEP152O94986 1710 aa27.18■■□□□ 1.94
VPS51-213ENST00000533827 ZNF335Q9H4Z2 1342 aaPredicted RBP27.16■■□□□ 1.94
VPS51-213ENST00000533827 POLR1AO95602 1720 aaPredicted RBP27.16■■□□□ 1.94
VPS51-213ENST00000533827 PRDM15P57071 1507 aaPredicted RBP27.16■■□□□ 1.94
VPS51-213ENST00000533827 NEURL4Q96JN8 1562 aa27.14■■□□□ 1.94
VPS51-213ENST00000533827 UGGT1Q9NYU2 1555 aa27.14■■□□□ 1.94
VPS51-213ENST00000533827 ERVK-7P63135 1459 aa27.13■■□□□ 1.93
VPS51-213ENST00000533827 THEMISQ8N1K5 641 aaPredicted RBP27.13■■□□□ 1.93
VPS51-213ENST00000533827 DEPDC5O75140 1603 aa27.12■■□□□ 1.93
VPS51-213ENST00000533827 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.11■■□□□ 1.93
VPS51-213ENST00000533827 ANKRD30AQ9BXX3 1397 aa27.1■■□□□ 1.93
VPS51-213ENST00000533827 CHIC2Q9UKJ5 165 aa27.09■■□□□ 1.93
VPS51-213ENST00000533827 ANKLE2Q86XL3 938 aa27.08■■□□□ 1.93
VPS51-213ENST00000533827 ARHGAP31Q2M1Z3 1444 aa27.07■■□□□ 1.92
VPS51-213ENST00000533827 ADGRL2O95490 1459 aa27.06■■□□□ 1.92
VPS51-213ENST00000533827 CFAP65Q6ZU64 1925 aaKnown RBP27.04■■□□□ 1.92
VPS51-213ENST00000533827 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.04■■□□□ 1.92
VPS51-213ENST00000533827 MED14O60244 1454 aa27.04■■□□□ 1.92
VPS51-213ENST00000533827 FAM50AQ14320 339 aaKnown RBP27.02■■□□□ 1.92
VPS51-213ENST00000533827 VWDEQ8N2E2 1590 aa27.01■■□□□ 1.92
VPS51-213ENST00000533827 KANK1Q14678 1352 aa27.01■■□□□ 1.91
VPS51-213ENST00000533827 UBR1Q8IWV7 1749 aa27.01■■□□□ 1.91
VPS51-213ENST00000533827 NPHP4O75161 1426 aaPredicted RBP27■■□□□ 1.91
VPS51-213ENST00000533827 LMTK2Q8IWU2 1503 aa27■■□□□ 1.91
VPS51-213ENST00000533827 IQGAP1P46940 1657 aa26.96■■□□□ 1.91
VPS51-213ENST00000533827 CPS1P31327 1500 aa26.95■■□□□ 1.91
VPS51-213ENST00000533827 UBAP1LF5GYI3 381 aa26.92■■□□□ 1.9
VPS51-213ENST00000533827 ANKRD50Q9ULJ7 1429 aa26.91■■□□□ 1.9
VPS51-213ENST00000533827 ARHGAP23Q9P227 1491 aa26.91■■□□□ 1.9
VPS51-213ENST00000533827 SLIT1O75093 1534 aa26.9■■□□□ 1.9
VPS51-213ENST00000533827 PIK3C2BO00750 1634 aa26.9■■□□□ 1.9
VPS51-213ENST00000533827 EFCAB6Q5THR3 1501 aa26.9■■□□□ 1.9
VPS51-213ENST00000533827 SCAF11Q99590 1463 aaKnown RBP26.88■■□□□ 1.89
VPS51-213ENST00000533827 SYNMO15061 1565 aa26.86■■□□□ 1.89
VPS51-213ENST00000533827 LTKP29376 864 aa26.86■■□□□ 1.89
VPS51-213ENST00000533827 NOS1P29475 1434 aa26.86■■□□□ 1.89
VPS51-213ENST00000533827 KDM5AP29375 1690 aaKnown RBP26.85■■□□□ 1.89
VPS51-213ENST00000533827 IDI1Q13907 227 aa26.84■■□□□ 1.89
VPS51-213ENST00000533827 TXNDC2Q86VQ3 553 aa26.84■■□□□ 1.89
VPS51-213ENST00000533827 STRCP1A6NGW2 1772 aa26.83■■□□□ 1.89
VPS51-213ENST00000533827 ROCK1Q13464 1354 aa26.82■■□□□ 1.88
VPS51-213ENST00000533827 TMEM2Q9UHN6 1383 aa26.82■■□□□ 1.88
VPS51-213ENST00000533827 RPRD2Q5VT52 1461 aaKnown RBP26.8■■□□□ 1.88
VPS51-213ENST00000533827 UNC13BO14795 1591 aa26.8■■□□□ 1.88
VPS51-213ENST00000533827 STAG3Q9UJ98 1225 aa26.79■■□□□ 1.88
VPS51-213ENST00000533827 EID1Q9Y6B2 187 aa26.79■■□□□ 1.88
VPS51-213ENST00000533827 TET3O43151 1660 aa26.79■■□□□ 1.88
VPS51-213ENST00000533827 PPARGC1BQ86YN6 1023 aaKnown RBP26.78■■□□□ 1.88
VPS51-213ENST00000533827 TOM1O60784 492 aa26.77■■□□□ 1.88
VPS51-213ENST00000533827 LRRC7Q96NW7 1537 aa26.76■■□□□ 1.87
VPS51-213ENST00000533827 SLC52A1Q9NWF4 448 aa26.75■■□□□ 1.87
VPS51-213ENST00000533827 ADGRB3O60242 1522 aa26.75■■□□□ 1.87
VPS51-213ENST00000533827 GCC2Q8IWJ2 1684 aa26.74■■□□□ 1.87
VPS51-213ENST00000533827 DISP3Q9P2K9 1392 aa26.73■■□□□ 1.87
VPS51-213ENST00000533827 ALKQ9UM73 1620 aa26.72■■□□□ 1.87
VPS51-213ENST00000533827 ITGAEP38570 1179 aa26.7■■□□□ 1.86
VPS51-213ENST00000533827 PIP4K2BP78356 416 aa26.7■■□□□ 1.86
VPS51-213ENST00000533827 IQGAP3Q86VI3 1631 aa26.68■■□□□ 1.86
VPS51-213ENST00000533827 SCAF1Q9H7N4 1312 aaKnown RBP26.67■■□□□ 1.86
VPS51-213ENST00000533827 E9PCH4 1651 aa26.67■■□□□ 1.86
VPS51-213ENST00000533827 HSPA1LP34931 641 aa26.64■■□□□ 1.86
VPS51-213ENST00000533827 TMEM131LA2VDJ0 1609 aa26.64■■□□□ 1.85
VPS51-213ENST00000533827 MYO5BQ9ULV0 1848 aa26.63■■□□□ 1.85
VPS51-213ENST00000533827 ZFYVE9O95405 1425 aa26.62■■□□□ 1.85
VPS51-213ENST00000533827 RRBP1Q9P2E9 1410 aaKnown RBP26.62■■□□□ 1.85
VPS51-213ENST00000533827 XIRP1Q702N8 1843 aaKnown RBP26.62■■□□□ 1.85
VPS51-213ENST00000533827 NUP155O75694 1391 aa26.61■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms