RNA–Protein interactions for RNA: ENST00000533756.5

PACS1-213, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 4

Gene PACS1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-213ENST00000533756 SAMD9LQ8IVG5 1584 aa15.24■□□□□ 0.03
PACS1-213ENST00000533756 ATP1B4Q9UN42 357 aaPredicted RBP15.23■□□□□ 0.03
PACS1-213ENST00000533756 PLXNC1O60486 1568 aa15.23■□□□□ 0.03
PACS1-213ENST00000533756 A2MP01023 1474 aa15.22■□□□□ 0.03
PACS1-213ENST00000533756 IQGAP1P46940 1657 aa15.22■□□□□ 0.03
PACS1-213ENST00000533756 ZNF772Q68DY9 489 aaPredicted RBP15.21■□□□□ 0.03
PACS1-213ENST00000533756 PREX2Q70Z35 1606 aa15.21■□□□□ 0.02
PACS1-213ENST00000533756 FBXO31Q5XUX0 539 aaPredicted RBP15.2■□□□□ 0.02
PACS1-213ENST00000533756 TRIM52Q96A61 297 aa15.2■□□□□ 0.02
PACS1-213ENST00000533756 FAM135AQ9P2D6 1515 aa15.2■□□□□ 0.02
PACS1-213ENST00000533756 NLRP1Q9C000 1473 aa15.19■□□□□ 0.02
PACS1-213ENST00000533756 UGGT1Q9NYU2 1555 aa15.18■□□□□ 0.02
PACS1-213ENST00000533756 FMN1Q68DA7 1419 aa15.17■□□□□ 0.02
PACS1-213ENST00000533756 MIA2Q96PC5 1412 aa15.17■□□□□ 0.02
PACS1-213ENST00000533756 JCADQ9P266 1359 aa15.16■□□□□ 0.02
PACS1-213ENST00000533756 ATP7AQ04656 1500 aa15.16■□□□□ 0.02
PACS1-213ENST00000533756 PZPP20742 1482 aa15.15■□□□□ 0.02
PACS1-213ENST00000533756 RXRBP28702 533 aa15.15■□□□□ 0.02
PACS1-213ENST00000533756 KDM5DQ9BY66 1539 aa15.14■□□□□ 0.01
PACS1-213ENST00000533756 CDK12Q9NYV4 1490 aaPredicted RBP15.14■□□□□ 0.01
PACS1-213ENST00000533756 HNRNPMP52272 730 aaKnown RBP eCLIP15.13■□□□□ 0.01
PACS1-213ENST00000533756 ZNF777Q9ULD5 760 aaPredicted RBP15.12■□□□□ 0.01
PACS1-213ENST00000533756 ROBO1Q9Y6N7 1651 aa15.11■□□□□ 0.01
PACS1-213ENST00000533756 INO80Q9ULG1 1556 aaPredicted RBP15.11■□□□□ 0.01
PACS1-213ENST00000533756 XIRP1Q702N8 1843 aaKnown RBP15.1■□□□□ 0.01
PACS1-213ENST00000533756 KIAA1107Q9UPP5 1409 aa15.1■□□□□ 0.01
PACS1-213ENST00000533756 SPATA31A6Q5VVP1 1343 aa15.1■□□□□ 0.01
PACS1-213ENST00000533756 SYCP2Q9BX26 1530 aa15.09■□□□□ 0.01
PACS1-213ENST00000533756 ZRANB1Q9UGI0 708 aa15.09■□□□□ 0.01
PACS1-213ENST00000533756 ZC3H13Q5T200 1668 aaKnown RBP15.09■□□□□ 0.01
PACS1-213ENST00000533756 LRRC9Q6ZRR7 1453 aa15.08■□□□□ 0.01
PACS1-213ENST00000533756 MEX3CQ5U5Q3 659 aaKnown RBP15.08■□□□□ 0
PACS1-213ENST00000533756 ADGBQ8N7X0 1667 aa15.07■□□□□ 0
PACS1-213ENST00000533756 CDC42BPAQ5VT25 1732 aa15.07■□□□□ 0
PACS1-213ENST00000533756 WASHC2CQ9Y4E1 1318 aa15.07■□□□□ 0
PACS1-213ENST00000533756 PLEKHH2Q8IVE3 1493 aa15.06■□□□□ 0
PACS1-213ENST00000533756 TMEM94Q12767 1356 aa15.05■□□□□ -0
PACS1-213ENST00000533756 DHX29Q7Z478 1369 aaKnown RBP15.05■□□□□ -0
PACS1-213ENST00000533756 LRP6O75581 1613 aa15.04■□□□□ -0
PACS1-213ENST00000533756 FGD6Q6ZV73 1430 aa15.03■□□□□ -0
PACS1-213ENST00000533756 PHLPP1O60346 1717 aa15.03■□□□□ -0
PACS1-213ENST00000533756 SCAF11Q99590 1463 aaKnown RBP15.02■□□□□ -0
PACS1-213ENST00000533756 KIF3BO15066 747 aa15.02■□□□□ -0
PACS1-213ENST00000533756 SLAIN2Q9P270 581 aa15.02■□□□□ -0
PACS1-213ENST00000533756 GPATCH8Q9UKJ3 1502 aaKnown RBP15.01□□□□□ -0.01
PACS1-213ENST00000533756 TXNDC2Q86VQ3 553 aa15□□□□□ -0.01
PACS1-213ENST00000533756 RTEL1-TNFRSF6BF6WH68 1400 aa15□□□□□ -0.01
PACS1-213ENST00000533756 KCNA6P17658 529 aa14.99□□□□□ -0.01
PACS1-213ENST00000533756 LTKP29376 864 aa14.99□□□□□ -0.01
PACS1-213ENST00000533756 EEA1Q15075 1411 aa14.99□□□□□ -0.01
PACS1-213ENST00000533756 LRRIQ1Q96JM4 1722 aa14.98□□□□□ -0.01
PACS1-213ENST00000533756 PROSER2Q86WR7 435 aaPredicted RBP14.98□□□□□ -0.01
PACS1-213ENST00000533756 CFDP1Q9UEE9 299 aaPredicted RBP14.98□□□□□ -0.01
PACS1-213ENST00000533756 MAP3K1Q13233 1512 aa14.97□□□□□ -0.01
PACS1-213ENST00000533756 COL16A1Q07092 1604 aaPredicted RBP14.97□□□□□ -0.01
PACS1-213ENST00000533756 SETBP1Q9Y6X0 1596 aa14.97□□□□□ -0.01
PACS1-213ENST00000533756 CCDC18Q5T9S5 1454 aa14.96□□□□□ -0.01
PACS1-213ENST00000533756 ARHGAP35Q9NRY4 1499 aa14.96□□□□□ -0.01
PACS1-213ENST00000533756 ARHGAP23Q9P227 1491 aa14.96□□□□□ -0.01
PACS1-213ENST00000533756 NUTM2BA6NNL0 878 aaPredicted RBP14.96□□□□□ -0.01
PACS1-213ENST00000533756 NUTM2EB1AL46 878 aaPredicted RBP14.96□□□□□ -0.01
PACS1-213ENST00000533756 NUTM2DQ5VT03 806 aaPredicted RBP14.96□□□□□ -0.01
PACS1-213ENST00000533756 NUTM2AQ8IVF1 878 aaPredicted RBP14.96□□□□□ -0.01
PACS1-213ENST00000533756 EID1Q9Y6B2 187 aa14.96□□□□□ -0.01
PACS1-213ENST00000533756 SLIT1O75093 1534 aa14.96□□□□□ -0.02
PACS1-213ENST00000533756 MSH6P52701 1360 aa14.96□□□□□ -0.02
PACS1-213ENST00000533756 RBM6P78332 1123 aaKnown RBP14.95□□□□□ -0.02
PACS1-213ENST00000533756 RBM33Q96EV2 1170 aaKnown RBP14.95□□□□□ -0.02
PACS1-213ENST00000533756 RGS12O14924 1447 aa14.94□□□□□ -0.02
PACS1-213ENST00000533756 ATAD2Q6PL18 1390 aa14.94□□□□□ -0.02
PACS1-213ENST00000533756 PRDM15P57071 1507 aaPredicted RBP14.93□□□□□ -0.02
PACS1-213ENST00000533756 MAPK8IP2Q13387 824 aaPredicted RBP14.93□□□□□ -0.02
PACS1-213ENST00000533756 AFF2P51816 1311 aa14.92□□□□□ -0.02
PACS1-213ENST00000533756 UBR1Q8IWV7 1749 aa14.92□□□□□ -0.02
PACS1-213ENST00000533756 NCOA2Q15596 1464 aa14.92□□□□□ -0.02
PACS1-213ENST00000533756 QTRT2Q9H974 415 aaKnown RBP14.91□□□□□ -0.02
PACS1-213ENST00000533756 ABCC3O15438 1527 aa14.91□□□□□ -0.02
PACS1-213ENST00000533756 SHPRHQ149N8 1683 aa14.9□□□□□ -0.02
PACS1-213ENST00000533756 ERVK-7P63135 1459 aa14.9□□□□□ -0.02
PACS1-213ENST00000533756 CCDC125Q86Z20 511 aa14.9□□□□□ -0.02
PACS1-213ENST00000533756 MBD5Q9P267 1494 aa14.89□□□□□ -0.03
PACS1-213ENST00000533756 TIAM1Q13009 1591 aa14.89□□□□□ -0.03
PACS1-213ENST00000533756 NKTRP30414 1462 aaKnown RBP14.89□□□□□ -0.03
PACS1-213ENST00000533756 NGLY1Q96IV0 654 aa14.88□□□□□ -0.03
PACS1-213ENST00000533756 CASKIN1Q8WXD9 1431 aa14.88□□□□□ -0.03
PACS1-213ENST00000533756 CCNB3Q8WWL7 1395 aa14.87□□□□□ -0.03
PACS1-213ENST00000533756 AHDC1Q5TGY3 1603 aaPredicted RBP14.85□□□□□ -0.03
PACS1-213ENST00000533756 TMEM2Q9UHN6 1383 aa14.85□□□□□ -0.03
PACS1-213ENST00000533756 UBTFP17480 764 aaKnown RBP14.84□□□□□ -0.03
PACS1-213ENST00000533756 SLC26A8Q96RN1 970 aa14.84□□□□□ -0.03
PACS1-213ENST00000533756 ZNF644Q9H582 1327 aaPredicted RBP14.84□□□□□ -0.03
PACS1-213ENST00000533756 NWD1Q149M9 1564 aa14.82□□□□□ -0.04
PACS1-213ENST00000533756 TET3O43151 1660 aa14.82□□□□□ -0.04
PACS1-213ENST00000533756 RSPH4AQ5TD94 716 aa14.82□□□□□ -0.04
PACS1-213ENST00000533756 NCOA3Q9Y6Q9 1424 aa14.82□□□□□ -0.04
PACS1-213ENST00000533756 CAMSAP2Q08AD1 1489 aa14.81□□□□□ -0.04
PACS1-213ENST00000533756 PPP4R3CPQ6ZMV5 832 aa14.8□□□□□ -0.04
PACS1-213ENST00000533756 LRP5O75197 1615 aa14.8□□□□□ -0.04
PACS1-213ENST00000533756 KDM5AP29375 1690 aaKnown RBP14.79□□□□□ -0.04
PACS1-213ENST00000533756 DIP2AQ14689 1571 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms