RNA–Protein interactions for RNA: ENST00000533688.5

PDZD3-213, Transcript of PDZ domain containing 3, humanhuman

TSL 4

Gene PDZD3, Length 573 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD3-213ENST00000533688 KIF3BO15066 747 aa26.21■■□□□ 1.79
PDZD3-213ENST00000533688 ILDR2Q71H61 639 aa26.21■■□□□ 1.79
PDZD3-213ENST00000533688 TNRQ92752 1358 aa26.18■■□□□ 1.78
PDZD3-213ENST00000533688 PZPP20742 1482 aa26.17■■□□□ 1.78
PDZD3-213ENST00000533688 FAM135AQ9P2D6 1515 aa26.16■■□□□ 1.78
PDZD3-213ENST00000533688 UBAP1LF5GYI3 381 aa26.16■■□□□ 1.78
PDZD3-213ENST00000533688 FBXO31Q5XUX0 539 aaPredicted RBP26.16■■□□□ 1.78
PDZD3-213ENST00000533688 ARHGEF5Q12774 1597 aa26.15■■□□□ 1.78
PDZD3-213ENST00000533688 POLR1AO95602 1720 aaPredicted RBP26.14■■□□□ 1.77
PDZD3-213ENST00000533688 WASHC2CQ9Y4E1 1318 aa26.14■■□□□ 1.77
PDZD3-213ENST00000533688 NEURL4Q96JN8 1562 aa26.12■■□□□ 1.77
PDZD3-213ENST00000533688 RSPH4AQ5TD94 716 aa26.11■■□□□ 1.77
PDZD3-213ENST00000533688 LRRC9Q6ZRR7 1453 aa26.09■■□□□ 1.77
PDZD3-213ENST00000533688 VPS8Q8N3P4 1428 aa26.08■■□□□ 1.77
PDZD3-213ENST00000533688 TSPY4P0CV99 314 aa26.07■■□□□ 1.76
PDZD3-213ENST00000533688 TSPY10P0CW01 314 aa26.07■■□□□ 1.76
PDZD3-213ENST00000533688 SOCS7O14512 581 aa26.05■■□□□ 1.76
PDZD3-213ENST00000533688 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.05■■□□□ 1.76
PDZD3-213ENST00000533688 NLRP1Q9C000 1473 aa26.04■■□□□ 1.76
PDZD3-213ENST00000533688 RNF17Q9BXT8 1623 aaKnown RBP26.04■■□□□ 1.76
PDZD3-213ENST00000533688 MIA2Q96PC5 1412 aa26.04■■□□□ 1.76
PDZD3-213ENST00000533688 UGGT1Q9NYU2 1555 aa26.03■■□□□ 1.76
PDZD3-213ENST00000533688 MAST1Q9Y2H9 1570 aa26.03■■□□□ 1.76
PDZD3-213ENST00000533688 CPS1P31327 1500 aa26.02■■□□□ 1.76
PDZD3-213ENST00000533688 ABCC3O15438 1527 aa26.01■■□□□ 1.75
PDZD3-213ENST00000533688 ZC3H13Q5T200 1668 aaKnown RBP26■■□□□ 1.75
PDZD3-213ENST00000533688 SHANK2Q9UPX8 1470 aa26■■□□□ 1.75
PDZD3-213ENST00000533688 SCAF1Q9H7N4 1312 aaKnown RBP26■■□□□ 1.75
PDZD3-213ENST00000533688 ANKLE2Q86XL3 938 aa25.99■■□□□ 1.75
PDZD3-213ENST00000533688 THEMISQ8N1K5 641 aaPredicted RBP25.98■■□□□ 1.75
PDZD3-213ENST00000533688 EIF2AK4Q9P2K8 1649 aaKnown RBP25.98■■□□□ 1.75
PDZD3-213ENST00000533688 LOC105371045A0A1W2PR82 267 aa25.97■■□□□ 1.75
PDZD3-213ENST00000533688 NPHP4O75161 1426 aaPredicted RBP25.97■■□□□ 1.75
PDZD3-213ENST00000533688 VWDEQ8N2E2 1590 aa25.96■■□□□ 1.75
PDZD3-213ENST00000533688 PIP4K2BP78356 416 aa25.96■■□□□ 1.75
PDZD3-213ENST00000533688 KANK4Q5T7N3 995 aaPredicted RBP25.96■■□□□ 1.75
PDZD3-213ENST00000533688 MYOM3Q5VTT5 1437 aa25.96■■□□□ 1.75
PDZD3-213ENST00000533688 DEPDC5O75140 1603 aa25.96■■□□□ 1.75
PDZD3-213ENST00000533688 MROH1Q8NDA8 1641 aa25.95■■□□□ 1.74
PDZD3-213ENST00000533688 ERVK-7P63135 1459 aa25.93■■□□□ 1.74
PDZD3-213ENST00000533688 IQGAP1P46940 1657 aa25.93■■□□□ 1.74
PDZD3-213ENST00000533688 MED14O60244 1454 aa25.92■■□□□ 1.74
PDZD3-213ENST00000533688 CEP152O94986 1710 aa25.92■■□□□ 1.74
PDZD3-213ENST00000533688 MAP3K1Q13233 1512 aa25.92■■□□□ 1.74
PDZD3-213ENST00000533688 TOM1O60784 492 aa25.9■■□□□ 1.74
PDZD3-213ENST00000533688 HSPA1LP34931 641 aa25.89■■□□□ 1.74
PDZD3-213ENST00000533688 DUOX2Q9NRD8 1548 aa25.88■■□□□ 1.73
PDZD3-213ENST00000533688 CROCC2H7BZ55 1655 aa25.85■■□□□ 1.73
PDZD3-213ENST00000533688 PRDM15P57071 1507 aaPredicted RBP25.83■■□□□ 1.73
PDZD3-213ENST00000533688 KIF15Q9NS87 1388 aa25.83■■□□□ 1.73
PDZD3-213ENST00000533688 UBR1Q8IWV7 1749 aa25.83■■□□□ 1.73
PDZD3-213ENST00000533688 MED1Q15648 1581 aaPredicted RBP25.83■■□□□ 1.73
PDZD3-213ENST00000533688 ALKQ9UM73 1620 aa25.81■■□□□ 1.72
PDZD3-213ENST00000533688 STRCP1A6NGW2 1772 aa25.81■■□□□ 1.72
PDZD3-213ENST00000533688 SYNMO15061 1565 aa25.8■■□□□ 1.72
PDZD3-213ENST00000533688 PTPN23Q9H3S7 1636 aa25.8■■□□□ 1.72
PDZD3-213ENST00000533688 ERBINQ96RT1 1412 aa25.8■■□□□ 1.72
PDZD3-213ENST00000533688 ABCC5O15440 1437 aa25.79■■□□□ 1.72
PDZD3-213ENST00000533688 LRRC7Q96NW7 1537 aa25.78■■□□□ 1.72
PDZD3-213ENST00000533688 SCAF11Q99590 1463 aaKnown RBP25.78■■□□□ 1.72
PDZD3-213ENST00000533688 RRP7BPQ9NSQ0 103 aa25.77■■□□□ 1.72
PDZD3-213ENST00000533688 CFAP65Q6ZU64 1925 aaKnown RBP25.76■■□□□ 1.72
PDZD3-213ENST00000533688 DAPK1P53355 1430 aa25.75■■□□□ 1.71
PDZD3-213ENST00000533688 SENP3Q9H4L4 574 aaPredicted RBP25.75■■□□□ 1.71
PDZD3-213ENST00000533688 ARHGAP31Q2M1Z3 1444 aa25.74■■□□□ 1.71
PDZD3-213ENST00000533688 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.74■■□□□ 1.71
PDZD3-213ENST00000533688 SLIT1O75093 1534 aa25.73■■□□□ 1.71
PDZD3-213ENST00000533688 ARHGAP23Q9P227 1491 aa25.72■■□□□ 1.71
PDZD3-213ENST00000533688 APLP2Q06481 763 aa25.72■■□□□ 1.71
PDZD3-213ENST00000533688 FGD6Q6ZV73 1430 aa25.71■■□□□ 1.71
PDZD3-213ENST00000533688 PIK3C2BO00750 1634 aa25.7■■□□□ 1.71
PDZD3-213ENST00000533688 LTKP29376 864 aa25.69■■□□□ 1.7
PDZD3-213ENST00000533688 TXNDC2Q86VQ3 553 aa25.69■■□□□ 1.7
PDZD3-213ENST00000533688 KANK1Q14678 1352 aa25.69■■□□□ 1.7
PDZD3-213ENST00000533688 PHF23Q9BUL5 403 aaPredicted RBP25.65■■□□□ 1.7
PDZD3-213ENST00000533688 CHIC2Q9UKJ5 165 aa25.65■■□□□ 1.7
PDZD3-213ENST00000533688 EID1Q9Y6B2 187 aa25.64■■□□□ 1.7
PDZD3-213ENST00000533688 ANKRD30AQ9BXX3 1397 aa25.64■■□□□ 1.69
PDZD3-213ENST00000533688 STAG3Q9UJ98 1225 aa25.63■■□□□ 1.69
PDZD3-213ENST00000533688 TMEM2Q9UHN6 1383 aa25.62■■□□□ 1.69
PDZD3-213ENST00000533688 EFCAB6Q5THR3 1501 aa25.62■■□□□ 1.69
PDZD3-213ENST00000533688 LMTK2Q8IWU2 1503 aa25.62■■□□□ 1.69
PDZD3-213ENST00000533688 XIRP1Q702N8 1843 aaKnown RBP25.58■■□□□ 1.68
PDZD3-213ENST00000533688 KDM5AP29375 1690 aaKnown RBP25.57■■□□□ 1.68
PDZD3-213ENST00000533688 ADGRB3O60242 1522 aa25.55■■□□□ 1.68
PDZD3-213ENST00000533688 IDI1Q13907 227 aa25.55■■□□□ 1.68
PDZD3-213ENST00000533688 ADGRL2O95490 1459 aa25.53■■□□□ 1.68
PDZD3-213ENST00000533688 NOS1P29475 1434 aa25.52■■□□□ 1.68
PDZD3-213ENST00000533688 TMEM94Q12767 1356 aa25.5■■□□□ 1.67
PDZD3-213ENST00000533688 FAM50AQ14320 339 aaKnown RBP25.5■■□□□ 1.67
PDZD3-213ENST00000533688 SLC26A8Q96RN1 970 aa25.49■■□□□ 1.67
PDZD3-213ENST00000533688 TET3O43151 1660 aa25.48■■□□□ 1.67
PDZD3-213ENST00000533688 ANKRD50Q9ULJ7 1429 aa25.46■■□□□ 1.67
PDZD3-213ENST00000533688 KCNA6P17658 529 aa25.45■■□□□ 1.66
PDZD3-213ENST00000533688 RBM33Q96EV2 1170 aaKnown RBP25.45■■□□□ 1.66
PDZD3-213ENST00000533688 NWD1Q149M9 1564 aa25.44■■□□□ 1.66
PDZD3-213ENST00000533688 RPRD2Q5VT52 1461 aaKnown RBP25.43■■□□□ 1.66
PDZD3-213ENST00000533688 BCANQ96GW7 911 aa25.43■■□□□ 1.66
PDZD3-213ENST00000533688 FAM135BQ49AJ0 1406 aa25.43■■□□□ 1.66
PDZD3-213ENST00000533688 NKTRP30414 1462 aaKnown RBP25.42■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms