RNA–Protein interactions for RNA: ENST00000533674.1

BEST3-207, Transcript of bestrophin 3, humanhuman

TSL 3

Gene BEST3, Length 670 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-207ENST00000533674 SPAG9O60271 1321 aaKnown RBP14.66□□□□□ -0.06
BEST3-207ENST00000533674 MROH2AA6NES4 1674 aa14.65□□□□□ -0.06
BEST3-207ENST00000533674 NCOA1Q15788 1441 aa14.63□□□□□ -0.07
BEST3-207ENST00000533674 CAMSAP1Q5T5Y3 1602 aa14.63□□□□□ -0.07
BEST3-207ENST00000533674 ATP7AQ04656 1500 aa14.62□□□□□ -0.07
BEST3-207ENST00000533674 HNRNPMP52272 730 aaKnown RBP eCLIP14.62□□□□□ -0.07
BEST3-207ENST00000533674 NPATQ14207 1427 aa14.62□□□□□ -0.07
BEST3-207ENST00000533674 SPATA31D1Q6ZQQ2 1576 aa14.62□□□□□ -0.07
BEST3-207ENST00000533674 ZNF692Q9BU19 519 aaPredicted RBP14.62□□□□□ -0.07
BEST3-207ENST00000533674 SSUH2Q9Y2M2 353 aa14.62□□□□□ -0.07
BEST3-207ENST00000533674 CLTCQ00610 1675 aaKnown RBP14.61□□□□□ -0.07
BEST3-207ENST00000533674 CCNB3Q8WWL7 1395 aa14.61□□□□□ -0.07
BEST3-207ENST00000533674 CFDP1Q9UEE9 299 aaPredicted RBP14.61□□□□□ -0.07
BEST3-207ENST00000533674 PLEKHH2Q8IVE3 1493 aa14.61□□□□□ -0.07
BEST3-207ENST00000533674 ZMYM3Q14202 1370 aa14.6□□□□□ -0.07
BEST3-207ENST00000533674 CHRDL2Q6WN34 429 aa14.6□□□□□ -0.07
BEST3-207ENST00000533674 GPATCH8Q9UKJ3 1502 aaKnown RBP14.6□□□□□ -0.07
BEST3-207ENST00000533674 IQSEC2Q5JU85 1478 aa14.59□□□□□ -0.07
BEST3-207ENST00000533674 MTUS2Q5JR59 1369 aa14.59□□□□□ -0.07
BEST3-207ENST00000533674 LTBP4Q8N2S1 1624 aa14.59□□□□□ -0.07
BEST3-207ENST00000533674 GGT6Q6P531 493 aa14.58□□□□□ -0.08
BEST3-207ENST00000533674 INO80Q9ULG1 1556 aaPredicted RBP14.58□□□□□ -0.08
BEST3-207ENST00000533674 MYO3AQ8NEV4 1616 aa14.58□□□□□ -0.08
BEST3-207ENST00000533674 A2MP01023 1474 aa14.57□□□□□ -0.08
BEST3-207ENST00000533674 POTEHQ6S545 545 aa14.57□□□□□ -0.08
BEST3-207ENST00000533674 ILDR2Q71H61 639 aa14.57□□□□□ -0.08
BEST3-207ENST00000533674 NCKAP5LQ9HCH0 1330 aa14.57□□□□□ -0.08
BEST3-207ENST00000533674 KIAA1107Q9UPP5 1409 aa14.57□□□□□ -0.08
BEST3-207ENST00000533674 ZNF142P52746 1687 aaPredicted RBP14.56□□□□□ -0.08
BEST3-207ENST00000533674 PLXNC1O60486 1568 aa14.56□□□□□ -0.08
BEST3-207ENST00000533674 ADGBQ8N7X0 1667 aa14.55□□□□□ -0.08
BEST3-207ENST00000533674 SOCS7O14512 581 aa14.55□□□□□ -0.08
BEST3-207ENST00000533674 CEP170BQ9Y4F5 1589 aaPredicted RBP14.55□□□□□ -0.08
BEST3-207ENST00000533674 PKD2Q13563 968 aa14.54□□□□□ -0.08
BEST3-207ENST00000533674 ZNF335Q9H4Z2 1342 aaPredicted RBP14.53□□□□□ -0.08
BEST3-207ENST00000533674 UBAP1LF5GYI3 381 aa14.53□□□□□ -0.08
BEST3-207ENST00000533674 PLA2R1Q13018 1463 aa14.52□□□□□ -0.08
BEST3-207ENST00000533674 PTPRKQ15262 1439 aa14.51□□□□□ -0.09
BEST3-207ENST00000533674 PITPNM1O00562 1244 aa14.51□□□□□ -0.09
BEST3-207ENST00000533674 EHBP1L1Q8N3D4 1523 aa14.51□□□□□ -0.09
BEST3-207ENST00000533674 TIAM1Q13009 1591 aa14.5□□□□□ -0.09
BEST3-207ENST00000533674 TCOF1Q13428 1488 aaKnown RBP14.48□□□□□ -0.09
BEST3-207ENST00000533674 ZNF644Q9H582 1327 aaPredicted RBP14.47□□□□□ -0.09
BEST3-207ENST00000533674 A2ML1A8K2U0 1454 aa14.47□□□□□ -0.09
BEST3-207ENST00000533674 DNMT1P26358 1616 aaKnown RBP14.45□□□□□ -0.1
BEST3-207ENST00000533674 RTEL1-TNFRSF6BF6WH68 1400 aa14.45□□□□□ -0.1
BEST3-207ENST00000533674 POLR1AO95602 1720 aaPredicted RBP14.45□□□□□ -0.1
BEST3-207ENST00000533674 KIF3BO15066 747 aa14.44□□□□□ -0.1
BEST3-207ENST00000533674 KDM5DQ9BY66 1539 aa14.44□□□□□ -0.1
BEST3-207ENST00000533674 DHX29Q7Z478 1369 aaKnown RBP14.44□□□□□ -0.1
BEST3-207ENST00000533674 TNRQ92752 1358 aa14.43□□□□□ -0.1
BEST3-207ENST00000533674 CCDC141Q6ZP82 1450 aa14.43□□□□□ -0.1
BEST3-207ENST00000533674 MBD5Q9P267 1494 aa14.43□□□□□ -0.1
BEST3-207ENST00000533674 WASHC2CQ9Y4E1 1318 aa14.42□□□□□ -0.1
BEST3-207ENST00000533674 CEP162Q5TB80 1403 aa14.42□□□□□ -0.1
BEST3-207ENST00000533674 PIP4K2BP78356 416 aa14.42□□□□□ -0.1
BEST3-207ENST00000533674 SPDYE1Q8NFV5 336 aaPredicted RBP14.41□□□□□ -0.1
BEST3-207ENST00000533674 CAMSAP2Q08AD1 1489 aa14.41□□□□□ -0.1
BEST3-207ENST00000533674 FAM135AQ9P2D6 1515 aa14.41□□□□□ -0.1
BEST3-207ENST00000533674 PZPP20742 1482 aa14.4□□□□□ -0.1
BEST3-207ENST00000533674 FBXO31Q5XUX0 539 aaPredicted RBP14.4□□□□□ -0.1
BEST3-207ENST00000533674 CPS1P31327 1500 aa14.4□□□□□ -0.1
BEST3-207ENST00000533674 SPDYE4A6NLX3 237 aa14.39□□□□□ -0.11
BEST3-207ENST00000533674 TOM1O60784 492 aa14.39□□□□□ -0.11
BEST3-207ENST00000533674 RSPH4AQ5TD94 716 aa14.39□□□□□ -0.11
BEST3-207ENST00000533674 NCOA2Q15596 1464 aa14.38□□□□□ -0.11
BEST3-207ENST00000533674 TSPY4P0CV99 314 aa14.38□□□□□ -0.11
BEST3-207ENST00000533674 TSPY10P0CW01 314 aa14.38□□□□□ -0.11
BEST3-207ENST00000533674 ANKLE2Q86XL3 938 aa14.38□□□□□ -0.11
BEST3-207ENST00000533674 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.37□□□□□ -0.11
BEST3-207ENST00000533674 THEMISQ8N1K5 641 aaPredicted RBP14.37□□□□□ -0.11
BEST3-207ENST00000533674 NEURL4Q96JN8 1562 aa14.37□□□□□ -0.11
BEST3-207ENST00000533674 SHANK2Q9UPX8 1470 aa14.37□□□□□ -0.11
BEST3-207ENST00000533674 UGGT1Q9NYU2 1555 aa14.36□□□□□ -0.11
BEST3-207ENST00000533674 NLRP1Q9C000 1473 aa14.36□□□□□ -0.11
BEST3-207ENST00000533674 MIA2Q96PC5 1412 aa14.34□□□□□ -0.11
BEST3-207ENST00000533674 HSPA1LP34931 641 aa14.34□□□□□ -0.11
BEST3-207ENST00000533674 ARHGEF5Q12774 1597 aa14.34□□□□□ -0.11
BEST3-207ENST00000533674 NPHP4O75161 1426 aaPredicted RBP14.33□□□□□ -0.11
BEST3-207ENST00000533674 PIP4P2Q8N4L2 257 aa14.33□□□□□ -0.12
BEST3-207ENST00000533674 CLEC11AQ9Y240 323 aa14.33□□□□□ -0.12
BEST3-207ENST00000533674 MED1Q15648 1581 aaPredicted RBP14.33□□□□□ -0.12
BEST3-207ENST00000533674 FXR2P51116 673 aaKnown RBP eCLIP14.32□□□□□ -0.12
BEST3-207ENST00000533674 DEPDC5O75140 1603 aa14.32□□□□□ -0.12
BEST3-207ENST00000533674 IQGAP1P46940 1657 aa14.32□□□□□ -0.12
BEST3-207ENST00000533674 ZC3H13Q5T200 1668 aaKnown RBP14.32□□□□□ -0.12
BEST3-207ENST00000533674 VWDEQ8N2E2 1590 aa14.3□□□□□ -0.12
BEST3-207ENST00000533674 RNF17Q9BXT8 1623 aaKnown RBP14.3□□□□□ -0.12
BEST3-207ENST00000533674 ABCC3O15438 1527 aa14.28□□□□□ -0.12
BEST3-207ENST00000533674 MED14O60244 1454 aa14.28□□□□□ -0.12
BEST3-207ENST00000533674 EIF2AK4Q9P2K8 1649 aaKnown RBP14.28□□□□□ -0.12
BEST3-207ENST00000533674 SYNMO15061 1565 aa14.26□□□□□ -0.13
BEST3-207ENST00000533674 MAST1Q9Y2H9 1570 aa14.26□□□□□ -0.13
BEST3-207ENST00000533674 LRRC9Q6ZRR7 1453 aa14.26□□□□□ -0.13
BEST3-207ENST00000533674 CEP152O94986 1710 aa14.26□□□□□ -0.13
BEST3-207ENST00000533674 ERVK-7P63135 1459 aa14.25□□□□□ -0.13
BEST3-207ENST00000533674 VPS8Q8N3P4 1428 aa14.24□□□□□ -0.13
BEST3-207ENST00000533674 LRRC7Q96NW7 1537 aa14.22□□□□□ -0.13
BEST3-207ENST00000533674 UBR1Q8IWV7 1749 aa14.22□□□□□ -0.13
BEST3-207ENST00000533674 MYOM3Q5VTT5 1437 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms