RNA–Protein interactions for RNA: ENST00000533476.5

UBXN1-215, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 1,912 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-215ENST00000533476 ZNF326Q5BKZ1 582 aaKnown RBP26.75■■□□□ 1.87
UBXN1-215ENST00000533476 ARID4BQ4LE39 1312 aaPredicted RBP26.71■■□□□ 1.87
UBXN1-215ENST00000533476 CCDC144AA2RUR9 1427 aa26.71■■□□□ 1.87
UBXN1-215ENST00000533476 PRKRIP1Q9H875 184 aaPredicted RBP26.7■■□□□ 1.86
UBXN1-215ENST00000533476 WDR7Q9Y4E6 1490 aa26.69■■□□□ 1.86
UBXN1-215ENST00000533476 PLA2R1Q13018 1463 aa26.69■■□□□ 1.86
UBXN1-215ENST00000533476 TRAPPC8Q9Y2L5 1435 aa26.68■■□□□ 1.86
UBXN1-215ENST00000533476 ATP10AO60312 1499 aa26.66■■□□□ 1.86
UBXN1-215ENST00000533476 RTEL1-TNFRSF6BF6WH68 1400 aa26.64■■□□□ 1.86
UBXN1-215ENST00000533476 DCAF11Q8TEB1 546 aa26.64■■□□□ 1.86
UBXN1-215ENST00000533476 ABCA9Q8IUA7 1624 aa26.63■■□□□ 1.85
UBXN1-215ENST00000533476 ZFYVE16Q7Z3T8 1539 aa26.63■■□□□ 1.85
UBXN1-215ENST00000533476 TRPM1Q7Z4N2 1603 aa26.63■■□□□ 1.85
UBXN1-215ENST00000533476 CARD11Q9BXL7 1154 aa26.63■■□□□ 1.85
UBXN1-215ENST00000533476 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.62■■□□□ 1.85
UBXN1-215ENST00000533476 PRAG1Q86YV5 1406 aa26.61■■□□□ 1.85
UBXN1-215ENST00000533476 DHX29Q7Z478 1369 aaKnown RBP26.6■■□□□ 1.85
UBXN1-215ENST00000533476 KDM2AQ9Y2K7 1162 aa26.6■■□□□ 1.85
UBXN1-215ENST00000533476 ROCK2O75116 1388 aaKnown RBP26.59■■□□□ 1.85
UBXN1-215ENST00000533476 A2MP01023 1474 aa26.58■■□□□ 1.85
UBXN1-215ENST00000533476 HNRNPUQ00839 825 aaKnown RBP eCLIP26.57■■□□□ 1.84
UBXN1-215ENST00000533476 SPAG9O60271 1321 aaKnown RBP26.57■■□□□ 1.84
UBXN1-215ENST00000533476 LAMC1P11047 1609 aa26.56■■□□□ 1.84
UBXN1-215ENST00000533476 CCDC184Q52MB2 194 aa26.55■■□□□ 1.84
UBXN1-215ENST00000533476 INO80Q9ULG1 1556 aaPredicted RBP26.55■■□□□ 1.84
UBXN1-215ENST00000533476 FANCAO15360 1455 aa26.55■■□□□ 1.84
UBXN1-215ENST00000533476 DEPDC5O75140 1603 aa26.54■■□□□ 1.84
UBXN1-215ENST00000533476 EIF2AK4Q9P2K8 1649 aaKnown RBP26.53■■□□□ 1.84
UBXN1-215ENST00000533476 MYT1Q01538 1121 aa26.52■■□□□ 1.84
UBXN1-215ENST00000533476 GPRASP1Q5JY77 1395 aa26.52■■□□□ 1.84
UBXN1-215ENST00000533476 ATP7AQ04656 1500 aa26.51■■□□□ 1.83
UBXN1-215ENST00000533476 MRS2Q9HD23 443 aa26.51■■□□□ 1.83
UBXN1-215ENST00000533476 NEFLP07196 543 aa26.5■■□□□ 1.83
UBXN1-215ENST00000533476 FKBP8Q14318 412 aa26.5■■□□□ 1.83
UBXN1-215ENST00000533476 E9PCH4 1651 aa26.49■■□□□ 1.83
UBXN1-215ENST00000533476 ASXL2Q76L83 1435 aa26.49■■□□□ 1.83
UBXN1-215ENST00000533476 ST20-MTHFSA0A0A6YYL1 179 aa26.49■■□□□ 1.83
UBXN1-215ENST00000533476 AFAP1Q8N556 730 aa26.49■■□□□ 1.83
UBXN1-215ENST00000533476 PRDM15P57071 1507 aaPredicted RBP26.46■■□□□ 1.83
UBXN1-215ENST00000533476 ADGRL1O94910 1474 aa26.46■■□□□ 1.83
UBXN1-215ENST00000533476 RGL3Q3MIN7 710 aa26.45■■□□□ 1.83
UBXN1-215ENST00000533476 POLR3GLQ9BT43 218 aa26.45■■□□□ 1.83
UBXN1-215ENST00000533476 TRPM2O94759 1503 aa26.45■■□□□ 1.83
UBXN1-215ENST00000533476 TET3O43151 1660 aa26.44■■□□□ 1.82
UBXN1-215ENST00000533476 VWDEQ8N2E2 1590 aa26.43■■□□□ 1.82
UBXN1-215ENST00000533476 SPHKAPQ2M3C7 1700 aa26.42■■□□□ 1.82
UBXN1-215ENST00000533476 RNF17Q9BXT8 1623 aaKnown RBP26.42■■□□□ 1.82
UBXN1-215ENST00000533476 FAM9BQ8IZU0 186 aa26.41■■□□□ 1.82
UBXN1-215ENST00000533476 SCAPERQ9BY12 1400 aa26.41■■□□□ 1.82
UBXN1-215ENST00000533476 PTPRTO14522 1441 aa26.4■■□□□ 1.82
UBXN1-215ENST00000533476 CEP152O94986 1710 aa26.4■■□□□ 1.82
UBXN1-215ENST00000533476 ZBED9Q6R2W3 1325 aa26.38■■□□□ 1.81
UBXN1-215ENST00000533476 NBPF1Q3BBV0 1214 aa26.37■■□□□ 1.81
UBXN1-215ENST00000533476 KTN1Q86UP2 1357 aaKnown RBP26.36■■□□□ 1.81
UBXN1-215ENST00000533476 KANK1Q14678 1352 aa26.35■■□□□ 1.81
UBXN1-215ENST00000533476 COL17A1Q9UMD9 1497 aaPredicted RBP26.35■■□□□ 1.81
UBXN1-215ENST00000533476 CLTCL1P53675 1640 aa26.35■■□□□ 1.81
UBXN1-215ENST00000533476 MADDQ8WXG6 1647 aa26.35■■□□□ 1.81
UBXN1-215ENST00000533476 MROH1Q8NDA8 1641 aa26.34■■□□□ 1.81
UBXN1-215ENST00000533476 BCANQ96GW7 911 aa26.34■■□□□ 1.81
UBXN1-215ENST00000533476 NPM1P06748 294 aaKnown RBP eCLIP26.33■■□□□ 1.81
UBXN1-215ENST00000533476 CFAP74Q9C0B2 1584 aa26.33■■□□□ 1.8
UBXN1-215ENST00000533476 KIDINS220Q9ULH0 1771 aa26.31■■□□□ 1.8
UBXN1-215ENST00000533476 TSHZ2Q9NRE2 1034 aa26.31■■□□□ 1.8
UBXN1-215ENST00000533476 NEURL4Q96JN8 1562 aa26.3■■□□□ 1.8
UBXN1-215ENST00000533476 ZNF518AQ6AHZ1 1483 aa26.3■■□□□ 1.8
UBXN1-215ENST00000533476 STAC3Q96MF2 364 aa26.27■■□□□ 1.8
UBXN1-215ENST00000533476 TESK2Q96S53 571 aa26.27■■□□□ 1.8
UBXN1-215ENST00000533476 RALBP1Q15311 655 aa26.26■■□□□ 1.79
UBXN1-215ENST00000533476 IQGAP1P46940 1657 aa26.26■■□□□ 1.79
UBXN1-215ENST00000533476 KIF3BO15066 747 aa26.25■■□□□ 1.79
UBXN1-215ENST00000533476 EFCAB6Q5THR3 1501 aa26.24■■□□□ 1.79
UBXN1-215ENST00000533476 MYBBP1AQ9BQG0 1328 aaKnown RBP26.23■■□□□ 1.79
UBXN1-215ENST00000533476 BRD4O60885 1362 aaPredicted RBP26.23■■□□□ 1.79
UBXN1-215ENST00000533476 DISP3Q9P2K9 1392 aa26.23■■□□□ 1.79
UBXN1-215ENST00000533476 MYT1LQ9UL68 1186 aa26.23■■□□□ 1.79
UBXN1-215ENST00000533476 CNGB1Q14028 1251 aaPredicted RBP26.22■■□□□ 1.79
UBXN1-215ENST00000533476 LMTK2Q8IWU2 1503 aa26.21■■□□□ 1.79
UBXN1-215ENST00000533476 CD109Q6YHK3 1445 aa26.21■■□□□ 1.79
UBXN1-215ENST00000533476 POGZQ7Z3K3 1410 aa26.21■■□□□ 1.79
UBXN1-215ENST00000533476 PNISRQ8TF01 805 aaKnown RBP26.2■■□□□ 1.79
UBXN1-215ENST00000533476 KIAA1210Q9ULL0 1709 aa26.19■■□□□ 1.78
UBXN1-215ENST00000533476 PARD3Q8TEW0 1356 aa26.19■■□□□ 1.78
UBXN1-215ENST00000533476 TMC1Q8TDI8 760 aa26.18■■□□□ 1.78
UBXN1-215ENST00000533476 PPRC1Q5VV67 1664 aaKnown RBP26.18■■□□□ 1.78
UBXN1-215ENST00000533476 TMF1P82094 1093 aa26.18■■□□□ 1.78
UBXN1-215ENST00000533476 LRPPRCP42704 1394 aaKnown RBP26.17■■□□□ 1.78
UBXN1-215ENST00000533476 MLH3Q9UHC1 1453 aa26.16■■□□□ 1.78
UBXN1-215ENST00000533476 ERICH6BQ5W0A0 696 aa26.16■■□□□ 1.78
UBXN1-215ENST00000533476 HECW2Q9P2P5 1572 aa26.16■■□□□ 1.78
UBXN1-215ENST00000533476 WASHC2CQ9Y4E1 1318 aa26.16■■□□□ 1.78
UBXN1-215ENST00000533476 PER1O15534 1290 aaPredicted RBP26.15■■□□□ 1.78
UBXN1-215ENST00000533476 SCAF11Q99590 1463 aaKnown RBP26.15■■□□□ 1.78
UBXN1-215ENST00000533476 SMG6Q86US8 1419 aaKnown RBP26.15■■□□□ 1.78
UBXN1-215ENST00000533476 MYOM2P54296 1465 aa26.14■■□□□ 1.78
UBXN1-215ENST00000533476 TRHP20396 242 aaPredicted RBP26.14■■□□□ 1.77
UBXN1-215ENST00000533476 KIF1BO60333 1816 aa26.13■■□□□ 1.77
UBXN1-215ENST00000533476 FRMPD1Q5SYB0 1578 aa26.13■■□□□ 1.77
UBXN1-215ENST00000533476 UGGT1Q9NYU2 1555 aa26.11■■□□□ 1.77
UBXN1-215ENST00000533476 IFT172Q9UG01 1749 aa26.11■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms