RNA–Protein interactions for RNA: ENST00000533451.1

UBASH3B-208, Transcript of ubiquitin associated and SH3 domain containing B, humanhuman

TSL 2

Gene UBASH3B, Length 1,032 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3B-208ENST00000533451 GGT6Q6P531 493 aa17.63■□□□□ 0.41
UBASH3B-208ENST00000533451 DAPK1P53355 1430 aa17.63■□□□□ 0.41
UBASH3B-208ENST00000533451 CHIC2Q9UKJ5 165 aa17.61■□□□□ 0.41
UBASH3B-208ENST00000533451 ABCC5O15440 1437 aa17.61■□□□□ 0.41
UBASH3B-208ENST00000533451 KIF3BO15066 747 aa17.6■□□□□ 0.41
UBASH3B-208ENST00000533451 DHX29Q7Z478 1369 aaKnown RBP17.6■□□□□ 0.41
UBASH3B-208ENST00000533451 SHANK2Q9UPX8 1470 aa17.6■□□□□ 0.41
UBASH3B-208ENST00000533451 CLTCQ00610 1675 aaKnown RBP17.59■□□□□ 0.41
UBASH3B-208ENST00000533451 CEBPAP49715 358 aaPredicted RBP17.59■□□□□ 0.41
UBASH3B-208ENST00000533451 CNTLNQ9NXG0 1405 aa17.56■□□□□ 0.4
UBASH3B-208ENST00000533451 KIF15Q9NS87 1388 aa17.56■□□□□ 0.4
UBASH3B-208ENST00000533451 C3P01024 1663 aa17.56■□□□□ 0.4
UBASH3B-208ENST00000533451 ITGAEP38570 1179 aa17.56■□□□□ 0.4
UBASH3B-208ENST00000533451 RRP7BPQ9NSQ0 103 aa17.56■□□□□ 0.4
UBASH3B-208ENST00000533451 ANKRD30AQ9BXX3 1397 aa17.54■□□□□ 0.4
UBASH3B-208ENST00000533451 DUOX2Q9NRD8 1548 aa17.54■□□□□ 0.4
UBASH3B-208ENST00000533451 MROH2AA6NES4 1674 aa17.53■□□□□ 0.4
UBASH3B-208ENST00000533451 EIF2AK4Q9P2K8 1649 aaKnown RBP17.52■□□□□ 0.4
UBASH3B-208ENST00000533451 PREX1Q8TCU6 1659 aa17.51■□□□□ 0.39
UBASH3B-208ENST00000533451 RNF39Q9H2S5 420 aa17.5■□□□□ 0.39
UBASH3B-208ENST00000533451 WASHC2CQ9Y4E1 1318 aa17.49■□□□□ 0.39
UBASH3B-208ENST00000533451 KDM5DQ9BY66 1539 aa17.49■□□□□ 0.39
UBASH3B-208ENST00000533451 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.49■□□□□ 0.39
UBASH3B-208ENST00000533451 RNF17Q9BXT8 1623 aaKnown RBP17.49■□□□□ 0.39
UBASH3B-208ENST00000533451 ZMYM3Q14202 1370 aa17.48■□□□□ 0.39
UBASH3B-208ENST00000533451 ERBINQ96RT1 1412 aa17.47■□□□□ 0.39
UBASH3B-208ENST00000533451 LMTK3Q96Q04 1460 aa17.47■□□□□ 0.39
UBASH3B-208ENST00000533451 SETD1BQ9UPS6 1966 aaKnown RBP17.46■□□□□ 0.39
UBASH3B-208ENST00000533451 NCOA1Q15788 1441 aa17.46■□□□□ 0.39
UBASH3B-208ENST00000533451 UHRF1BP1Q6BDS2 1440 aa17.46■□□□□ 0.39
UBASH3B-208ENST00000533451 ADGRL2O95490 1459 aa17.45■□□□□ 0.38
UBASH3B-208ENST00000533451 CEP152O94986 1710 aa17.45■□□□□ 0.38
UBASH3B-208ENST00000533451 HSPA2P54652 639 aa17.45■□□□□ 0.38
UBASH3B-208ENST00000533451 FAM135AQ9P2D6 1515 aa17.44■□□□□ 0.38
UBASH3B-208ENST00000533451 ZC3H13Q5T200 1668 aaKnown RBP17.44■□□□□ 0.38
UBASH3B-208ENST00000533451 CACNB1Q02641 598 aaPredicted RBP17.43■□□□□ 0.38
UBASH3B-208ENST00000533451 PTPRKQ15262 1439 aa17.43■□□□□ 0.38
UBASH3B-208ENST00000533451 KANK1Q14678 1352 aa17.42■□□□□ 0.38
UBASH3B-208ENST00000533451 RRBP1Q9P2E9 1410 aaKnown RBP17.42■□□□□ 0.38
UBASH3B-208ENST00000533451 MROH1Q8NDA8 1641 aa17.42■□□□□ 0.38
UBASH3B-208ENST00000533451 ABCC3O15438 1527 aa17.42■□□□□ 0.38
UBASH3B-208ENST00000533451 CFAP65Q6ZU64 1925 aaKnown RBP17.41■□□□□ 0.38
UBASH3B-208ENST00000533451 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.4■□□□□ 0.38
UBASH3B-208ENST00000533451 NPATQ14207 1427 aa17.4■□□□□ 0.38
UBASH3B-208ENST00000533451 ANKRD50Q9ULJ7 1429 aa17.4■□□□□ 0.38
UBASH3B-208ENST00000533451 PRDM15P57071 1507 aaPredicted RBP17.4■□□□□ 0.38
UBASH3B-208ENST00000533451 CAMSAP1Q5T5Y3 1602 aa17.39■□□□□ 0.38
UBASH3B-208ENST00000533451 MYO3AQ8NEV4 1616 aa17.39■□□□□ 0.38
UBASH3B-208ENST00000533451 DEPDC5O75140 1603 aa17.39■□□□□ 0.37
UBASH3B-208ENST00000533451 PZPP20742 1482 aa17.38■□□□□ 0.37
UBASH3B-208ENST00000533451 FBXO31Q5XUX0 539 aaPredicted RBP17.37■□□□□ 0.37
UBASH3B-208ENST00000533451 ROCK1Q13464 1354 aa17.37■□□□□ 0.37
UBASH3B-208ENST00000533451 TNRQ92752 1358 aa17.35■□□□□ 0.37
UBASH3B-208ENST00000533451 CEP170BQ9Y4F5 1589 aaPredicted RBP17.33■□□□□ 0.37
UBASH3B-208ENST00000533451 ZNF142P52746 1687 aaPredicted RBP17.32■□□□□ 0.36
UBASH3B-208ENST00000533451 UNC13BO14795 1591 aa17.3■□□□□ 0.36
UBASH3B-208ENST00000533451 ERVK-7P63135 1459 aa17.3■□□□□ 0.36
UBASH3B-208ENST00000533451 GCC2Q8IWJ2 1684 aa17.29■□□□□ 0.36
UBASH3B-208ENST00000533451 C1QBPQ07021 282 aaKnown RBP17.28■□□□□ 0.36
UBASH3B-208ENST00000533451 A2ML1A8K2U0 1454 aa17.28■□□□□ 0.36
UBASH3B-208ENST00000533451 VWDEQ8N2E2 1590 aa17.28■□□□□ 0.36
UBASH3B-208ENST00000533451 SPATA31D1Q6ZQQ2 1576 aa17.27■□□□□ 0.35
UBASH3B-208ENST00000533451 EFCAB6Q5THR3 1501 aa17.26■□□□□ 0.35
UBASH3B-208ENST00000533451 TET3O43151 1660 aa17.26■□□□□ 0.35
UBASH3B-208ENST00000533451 LMTK2Q8IWU2 1503 aa17.26■□□□□ 0.35
UBASH3B-208ENST00000533451 STRCQ7RTU9 1775 aa17.25■□□□□ 0.35
UBASH3B-208ENST00000533451 NLRP1Q9C000 1473 aa17.25■□□□□ 0.35
UBASH3B-208ENST00000533451 NUP155O75694 1391 aa17.25■□□□□ 0.35
UBASH3B-208ENST00000533451 ARHGAP31Q2M1Z3 1444 aa17.24■□□□□ 0.35
UBASH3B-208ENST00000533451 IQGAP3Q86VI3 1631 aa17.23■□□□□ 0.35
UBASH3B-208ENST00000533451 UGGT1Q9NYU2 1555 aa17.23■□□□□ 0.35
UBASH3B-208ENST00000533451 NAIPQ13075 1403 aa17.22■□□□□ 0.35
UBASH3B-208ENST00000533451 TRIM52Q96A61 297 aa17.21■□□□□ 0.35
UBASH3B-208ENST00000533451 STAG3Q9UJ98 1225 aa17.21■□□□□ 0.35
UBASH3B-208ENST00000533451 HFM1A2PYH4 1435 aa17.21■□□□□ 0.34
UBASH3B-208ENST00000533451 NCKAP5LQ9HCH0 1330 aa17.21■□□□□ 0.34
UBASH3B-208ENST00000533451 THEMISQ8N1K5 641 aaPredicted RBP17.19■□□□□ 0.34
UBASH3B-208ENST00000533451 E9PCH4 1651 aa17.19■□□□□ 0.34
UBASH3B-208ENST00000533451 POLR1AO95602 1720 aaPredicted RBP17.18■□□□□ 0.34
UBASH3B-208ENST00000533451 PLA2R1Q13018 1463 aa17.18■□□□□ 0.34
UBASH3B-208ENST00000533451 PIK3C2BO00750 1634 aa17.18■□□□□ 0.34
UBASH3B-208ENST00000533451 RPRD2Q5VT52 1461 aaKnown RBP17.18■□□□□ 0.34
UBASH3B-208ENST00000533451 SYNMO15061 1565 aa17.17■□□□□ 0.34
UBASH3B-208ENST00000533451 UBR1Q8IWV7 1749 aa17.17■□□□□ 0.34
UBASH3B-208ENST00000533451 PKD2Q13563 968 aa17.16■□□□□ 0.34
UBASH3B-208ENST00000533451 SLC4A2P04920 1241 aa17.14■□□□□ 0.33
UBASH3B-208ENST00000533451 NOS1P29475 1434 aa17.13■□□□□ 0.33
UBASH3B-208ENST00000533451 ANKLE2Q86XL3 938 aa17.13■□□□□ 0.33
UBASH3B-208ENST00000533451 PTPRTO14522 1441 aa17.13■□□□□ 0.33
UBASH3B-208ENST00000533451 CHGAP10645 457 aaKnown RBP17.12■□□□□ 0.33
UBASH3B-208ENST00000533451 SLC4A1APQ9BWU0 796 aaKnown RBP17.12■□□□□ 0.33
UBASH3B-208ENST00000533451 IDI1Q13907 227 aa17.11■□□□□ 0.33
UBASH3B-208ENST00000533451 SPHKAPQ2M3C7 1700 aa17.1■□□□□ 0.33
UBASH3B-208ENST00000533451 SLC52A1Q9NWF4 448 aa17.1■□□□□ 0.33
UBASH3B-208ENST00000533451 U3KPZ7 1027 aaPredicted RBP17.1■□□□□ 0.33
UBASH3B-208ENST00000533451 ADGRB3O60242 1522 aa17.1■□□□□ 0.33
UBASH3B-208ENST00000533451 MYO5BQ9ULV0 1848 aa17.1■□□□□ 0.33
UBASH3B-208ENST00000533451 NEURL4Q96JN8 1562 aa17.09■□□□□ 0.33
UBASH3B-208ENST00000533451 EID1Q9Y6B2 187 aa17.08■□□□□ 0.32
UBASH3B-208ENST00000533451 IQGAP1P46940 1657 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms