RNA–Protein interactions for RNA: ENST00000533226.2

NCAM1-216, Transcript of neural cell adhesion molecule 1, humanhuman

TSL 2

Gene NCAM1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAM1-216ENST00000533226 FBXO31Q5XUX0 539 aaPredicted RBP18.86■□□□□ 0.61
NCAM1-216ENST00000533226 NEURL4Q96JN8 1562 aa18.85■□□□□ 0.61
NCAM1-216ENST00000533226 SCAF1Q9H7N4 1312 aaKnown RBP18.85■□□□□ 0.61
NCAM1-216ENST00000533226 KIF3BO15066 747 aa18.85■□□□□ 0.61
NCAM1-216ENST00000533226 CEP162Q5TB80 1403 aa18.84■□□□□ 0.61
NCAM1-216ENST00000533226 KDM5DQ9BY66 1539 aa18.84■□□□□ 0.61
NCAM1-216ENST00000533226 PZPP20742 1482 aa18.84■□□□□ 0.61
NCAM1-216ENST00000533226 PIP4K2BP78356 416 aa18.83■□□□□ 0.6
NCAM1-216ENST00000533226 CPS1P31327 1500 aa18.83■□□□□ 0.6
NCAM1-216ENST00000533226 CCDC141Q6ZP82 1450 aa18.83■□□□□ 0.6
NCAM1-216ENST00000533226 HSPA1LP34931 641 aa18.82■□□□□ 0.6
NCAM1-216ENST00000533226 SHANK2Q9UPX8 1470 aa18.82■□□□□ 0.6
NCAM1-216ENST00000533226 FAM135AQ9P2D6 1515 aa18.81■□□□□ 0.6
NCAM1-216ENST00000533226 WASHC2CQ9Y4E1 1318 aa18.8■□□□□ 0.6
NCAM1-216ENST00000533226 CAMSAP2Q08AD1 1489 aa18.8■□□□□ 0.6
NCAM1-216ENST00000533226 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.8■□□□□ 0.6
NCAM1-216ENST00000533226 TOM1O60784 492 aa18.79■□□□□ 0.6
NCAM1-216ENST00000533226 NCOA2Q15596 1464 aa18.78■□□□□ 0.6
NCAM1-216ENST00000533226 MED1Q15648 1581 aaPredicted RBP18.78■□□□□ 0.6
NCAM1-216ENST00000533226 ANKLE2Q86XL3 938 aa18.77■□□□□ 0.6
NCAM1-216ENST00000533226 VWDEQ8N2E2 1590 aa18.76■□□□□ 0.59
NCAM1-216ENST00000533226 MIA2Q96PC5 1412 aa18.76■□□□□ 0.59
NCAM1-216ENST00000533226 THEMISQ8N1K5 641 aaPredicted RBP18.76■□□□□ 0.59
NCAM1-216ENST00000533226 NLRP1Q9C000 1473 aa18.76■□□□□ 0.59
NCAM1-216ENST00000533226 UGGT1Q9NYU2 1555 aa18.75■□□□□ 0.59
NCAM1-216ENST00000533226 NPHP4O75161 1426 aaPredicted RBP18.74■□□□□ 0.59
NCAM1-216ENST00000533226 RSPH4AQ5TD94 716 aa18.74■□□□□ 0.59
NCAM1-216ENST00000533226 DEPDC5O75140 1603 aa18.74■□□□□ 0.59
NCAM1-216ENST00000533226 ARHGEF5Q12774 1597 aa18.73■□□□□ 0.59
NCAM1-216ENST00000533226 MED14O60244 1454 aa18.72■□□□□ 0.59
NCAM1-216ENST00000533226 ALKQ9UM73 1620 aa18.71■□□□□ 0.58
NCAM1-216ENST00000533226 IQGAP1P46940 1657 aa18.7■□□□□ 0.58
NCAM1-216ENST00000533226 TSPY4P0CV99 314 aa18.7■□□□□ 0.58
NCAM1-216ENST00000533226 TSPY10P0CW01 314 aa18.7■□□□□ 0.58
NCAM1-216ENST00000533226 RNF17Q9BXT8 1623 aaKnown RBP18.69■□□□□ 0.58
NCAM1-216ENST00000533226 ABCC3O15438 1527 aa18.68■□□□□ 0.58
NCAM1-216ENST00000533226 ZC3H13Q5T200 1668 aaKnown RBP18.66■□□□□ 0.58
NCAM1-216ENST00000533226 STRCP1A6NGW2 1772 aa18.66■□□□□ 0.58
NCAM1-216ENST00000533226 PHF23Q9BUL5 403 aaPredicted RBP18.65■□□□□ 0.58
NCAM1-216ENST00000533226 SENP3Q9H4L4 574 aaPredicted RBP18.65■□□□□ 0.58
NCAM1-216ENST00000533226 ERVK-7P63135 1459 aa18.65■□□□□ 0.58
NCAM1-216ENST00000533226 LRRC7Q96NW7 1537 aa18.64■□□□□ 0.58
NCAM1-216ENST00000533226 MAST1Q9Y2H9 1570 aa18.64■□□□□ 0.58
NCAM1-216ENST00000533226 MROH1Q8NDA8 1641 aa18.63■□□□□ 0.57
NCAM1-216ENST00000533226 EIF2AK4Q9P2K8 1649 aaKnown RBP18.63■□□□□ 0.57
NCAM1-216ENST00000533226 SYNMO15061 1565 aa18.62■□□□□ 0.57
NCAM1-216ENST00000533226 CEP152O94986 1710 aa18.61■□□□□ 0.57
NCAM1-216ENST00000533226 LRRC9Q6ZRR7 1453 aa18.61■□□□□ 0.57
NCAM1-216ENST00000533226 UBR1Q8IWV7 1749 aa18.6■□□□□ 0.57
NCAM1-216ENST00000533226 CFAP65Q6ZU64 1925 aaKnown RBP18.58■□□□□ 0.56
NCAM1-216ENST00000533226 SCAF11Q99590 1463 aaKnown RBP18.58■□□□□ 0.56
NCAM1-216ENST00000533226 VPS8Q8N3P4 1428 aa18.56■□□□□ 0.56
NCAM1-216ENST00000533226 DUOX2Q9NRD8 1548 aa18.54■□□□□ 0.56
NCAM1-216ENST00000533226 MYOM3Q5VTT5 1437 aa18.54■□□□□ 0.56
NCAM1-216ENST00000533226 ARHGAP23Q9P227 1491 aa18.53■□□□□ 0.56
NCAM1-216ENST00000533226 LTKP29376 864 aa18.53■□□□□ 0.56
NCAM1-216ENST00000533226 KANK4Q5T7N3 995 aaPredicted RBP18.53■□□□□ 0.56
NCAM1-216ENST00000533226 TXNDC2Q86VQ3 553 aa18.53■□□□□ 0.56
NCAM1-216ENST00000533226 SLIT1O75093 1534 aa18.53■□□□□ 0.56
NCAM1-216ENST00000533226 PRDM15P57071 1507 aaPredicted RBP18.51■□□□□ 0.55
NCAM1-216ENST00000533226 ARHGAP31Q2M1Z3 1444 aa18.5■□□□□ 0.55
NCAM1-216ENST00000533226 XIRP1Q702N8 1843 aaKnown RBP18.5■□□□□ 0.55
NCAM1-216ENST00000533226 KIF15Q9NS87 1388 aa18.5■□□□□ 0.55
NCAM1-216ENST00000533226 PIK3C2BO00750 1634 aa18.49■□□□□ 0.55
NCAM1-216ENST00000533226 MAP3K1Q13233 1512 aa18.49■□□□□ 0.55
NCAM1-216ENST00000533226 EID1Q9Y6B2 187 aa18.48■□□□□ 0.55
NCAM1-216ENST00000533226 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.47■□□□□ 0.55
NCAM1-216ENST00000533226 ERBINQ96RT1 1412 aa18.47■□□□□ 0.55
NCAM1-216ENST00000533226 CROCC2H7BZ55 1655 aa18.47■□□□□ 0.55
NCAM1-216ENST00000533226 RRP7BPQ9NSQ0 103 aa18.46■□□□□ 0.55
NCAM1-216ENST00000533226 TMEM2Q9UHN6 1383 aa18.45■□□□□ 0.54
NCAM1-216ENST00000533226 RGS17Q9UGC6 210 aaPredicted RBP18.45■□□□□ 0.54
NCAM1-216ENST00000533226 ABCC5O15440 1437 aa18.45■□□□□ 0.54
NCAM1-216ENST00000533226 STAG3Q9UJ98 1225 aa18.44■□□□□ 0.54
NCAM1-216ENST00000533226 LOC105371045A0A1W2PR82 267 aa18.43■□□□□ 0.54
NCAM1-216ENST00000533226 EFCAB6Q5THR3 1501 aa18.42■□□□□ 0.54
NCAM1-216ENST00000533226 TMEM94Q12767 1356 aa18.42■□□□□ 0.54
NCAM1-216ENST00000533226 KANK1Q14678 1352 aa18.42■□□□□ 0.54
NCAM1-216ENST00000533226 PTPN23Q9H3S7 1636 aa18.41■□□□□ 0.54
NCAM1-216ENST00000533226 FAM135BQ49AJ0 1406 aa18.41■□□□□ 0.54
NCAM1-216ENST00000533226 KDM5AP29375 1690 aaKnown RBP18.4■□□□□ 0.54
NCAM1-216ENST00000533226 DAPK1P53355 1430 aa18.4■□□□□ 0.54
NCAM1-216ENST00000533226 IDI1Q13907 227 aa18.39■□□□□ 0.53
NCAM1-216ENST00000533226 SLC26A8Q96RN1 970 aa18.38■□□□□ 0.53
NCAM1-216ENST00000533226 LMTK2Q8IWU2 1503 aa18.38■□□□□ 0.53
NCAM1-216ENST00000533226 ROBO1Q9Y6N7 1651 aa18.38■□□□□ 0.53
NCAM1-216ENST00000533226 KCNA6P17658 529 aa18.37■□□□□ 0.53
NCAM1-216ENST00000533226 RBM33Q96EV2 1170 aaKnown RBP18.37■□□□□ 0.53
NCAM1-216ENST00000533226 TET3O43151 1660 aa18.37■□□□□ 0.53
NCAM1-216ENST00000533226 PROSER2Q86WR7 435 aaPredicted RBP18.36■□□□□ 0.53
NCAM1-216ENST00000533226 CHIC2Q9UKJ5 165 aa18.35■□□□□ 0.53
NCAM1-216ENST00000533226 ADGRB3O60242 1522 aa18.34■□□□□ 0.53
NCAM1-216ENST00000533226 FGD6Q6ZV73 1430 aa18.34■□□□□ 0.53
NCAM1-216ENST00000533226 POTEAQ6S8J7 498 aa18.34■□□□□ 0.53
NCAM1-216ENST00000533226 NOS1P29475 1434 aa18.33■□□□□ 0.53
NCAM1-216ENST00000533226 ANKRD30AQ9BXX3 1397 aa18.33■□□□□ 0.53
NCAM1-216ENST00000533226 NWD1Q149M9 1564 aa18.33■□□□□ 0.52
NCAM1-216ENST00000533226 NKTRP30414 1462 aaKnown RBP18.33■□□□□ 0.52
NCAM1-216ENST00000533226 APLP2Q06481 763 aa18.3■□□□□ 0.52
NCAM1-216ENST00000533226 BCANQ96GW7 911 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms