RNA–Protein interactions for RNA: ENST00000533167.5

PMS2P3-208, Transcript of PMS1 homolog 2, mismatch repair system component pseudogene 3, humanhuman

TSL 1 (best)

Gene PMS2P3, Length 637 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P3-208ENST00000533167 BCORL1Q5H9F3 1711 aa12.68□□□□□ -0.38
PMS2P3-208ENST00000533167 EIF2AK4Q9P2K8 1649 aaKnown RBP12.67□□□□□ -0.38
PMS2P3-208ENST00000533167 DEPDC5O75140 1603 aa12.66□□□□□ -0.38
PMS2P3-208ENST00000533167 PRDM15P57071 1507 aaPredicted RBP12.66□□□□□ -0.38
PMS2P3-208ENST00000533167 SIGLEC1Q9BZZ2 1709 aa12.65□□□□□ -0.38
PMS2P3-208ENST00000533167 MPHOSPH9Q99550 1183 aa12.65□□□□□ -0.38
PMS2P3-208ENST00000533167 NUP155O75694 1391 aa12.65□□□□□ -0.38
PMS2P3-208ENST00000533167 RNF17Q9BXT8 1623 aaKnown RBP12.65□□□□□ -0.38
PMS2P3-208ENST00000533167 KIF3BO15066 747 aa12.64□□□□□ -0.39
PMS2P3-208ENST00000533167 MYT1LQ9UL68 1186 aa12.63□□□□□ -0.39
PMS2P3-208ENST00000533167 CLSPNQ9HAW4 1339 aa12.62□□□□□ -0.39
PMS2P3-208ENST00000533167 LMTK2Q8IWU2 1503 aa12.62□□□□□ -0.39
PMS2P3-208ENST00000533167 FAM135AQ9P2D6 1515 aa12.62□□□□□ -0.39
PMS2P3-208ENST00000533167 TRIM52Q96A61 297 aa12.62□□□□□ -0.39
PMS2P3-208ENST00000533167 IQGAP3Q86VI3 1631 aa12.62□□□□□ -0.39
PMS2P3-208ENST00000533167 ANKRD30BQ9BXX2 1392 aa12.6□□□□□ -0.39
PMS2P3-208ENST00000533167 CCER1Q8TC90 406 aaPredicted RBP12.6□□□□□ -0.39
PMS2P3-208ENST00000533167 PLA2R1Q13018 1463 aa12.59□□□□□ -0.39
PMS2P3-208ENST00000533167 SLC4A1APQ9BWU0 796 aaKnown RBP12.59□□□□□ -0.39
PMS2P3-208ENST00000533167 ABCC3O15438 1527 aa12.58□□□□□ -0.4
PMS2P3-208ENST00000533167 PKD2Q13563 968 aa12.58□□□□□ -0.4
PMS2P3-208ENST00000533167 FOXD1Q16676 465 aa12.57□□□□□ -0.4
PMS2P3-208ENST00000533167 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.57□□□□□ -0.43e-12■■■■□ 22.5
PMS2P3-208ENST00000533167 PPP6R1Q9UPN7 881 aa12.56□□□□□ -0.4
PMS2P3-208ENST00000533167 PTPRTO14522 1441 aa12.55□□□□□ -0.4
PMS2P3-208ENST00000533167 ARHGAP31Q2M1Z3 1444 aa12.55□□□□□ -0.4
PMS2P3-208ENST00000533167 GGT6Q6P531 493 aa12.55□□□□□ -0.4
PMS2P3-208ENST00000533167 NPATQ14207 1427 aa12.54□□□□□ -0.4
PMS2P3-208ENST00000533167 EFCAB6Q5THR3 1501 aa12.54□□□□□ -0.4
PMS2P3-208ENST00000533167 KANK1Q14678 1352 aa12.54□□□□□ -0.4
PMS2P3-208ENST00000533167 SIN3AQ96ST3 1273 aa12.53□□□□□ -0.4
PMS2P3-208ENST00000533167 TET3O43151 1660 aa12.53□□□□□ -0.4
PMS2P3-208ENST00000533167 NOS1P29475 1434 aa12.51□□□□□ -0.41
PMS2P3-208ENST00000533167 RPRD2Q5VT52 1461 aaKnown RBP12.51□□□□□ -0.41
PMS2P3-208ENST00000533167 E9PCH4 1651 aa12.51□□□□□ -0.41
PMS2P3-208ENST00000533167 WASHC2CQ9Y4E1 1318 aa12.5□□□□□ -0.41
PMS2P3-208ENST00000533167 ZC3H13Q5T200 1668 aaKnown RBP12.48□□□□□ -0.41
PMS2P3-208ENST00000533167 CEP152O94986 1710 aa12.48□□□□□ -0.41
PMS2P3-208ENST00000533167 CAMSAP1Q5T5Y3 1602 aa12.48□□□□□ -0.41
PMS2P3-208ENST00000533167 TRPM2O94759 1503 aa12.47□□□□□ -0.41
PMS2P3-208ENST00000533167 MLECQ14165 292 aa12.47□□□□□ -0.41
PMS2P3-208ENST00000533167 CNTLNQ9NXG0 1405 aa12.45□□□□□ -0.42
PMS2P3-208ENST00000533167 ZMYM3Q14202 1370 aa12.45□□□□□ -0.42
PMS2P3-208ENST00000533167 ARID4BQ4LE39 1312 aaPredicted RBP12.45□□□□□ -0.42
PMS2P3-208ENST00000533167 SPATA31E1Q6ZUB1 1445 aa12.45□□□□□ -0.42
PMS2P3-208ENST00000533167 ZEB1P37275 1124 aaPredicted RBP12.44□□□□□ -0.42
PMS2P3-208ENST00000533167 TIMELESSQ9UNS1 1208 aa12.44□□□□□ -0.42
PMS2P3-208ENST00000533167 ERVK-7P63135 1459 aa12.44□□□□□ -0.42
PMS2P3-208ENST00000533167 SYNMO15061 1565 aa12.43□□□□□ -0.42
PMS2P3-208ENST00000533167 ADAMTSL3P82987 1691 aa12.43□□□□□ -0.42
PMS2P3-208ENST00000533167 FBXO31Q5XUX0 539 aaPredicted RBP12.43□□□□□ -0.42
PMS2P3-208ENST00000533167 SPATA31D1Q6ZQQ2 1576 aa12.43□□□□□ -0.42
PMS2P3-208ENST00000533167 NEUROD1Q13562 356 aa12.42□□□□□ -0.42
PMS2P3-208ENST00000533167 CCDC144AA2RUR9 1427 aa12.42□□□□□ -0.42
PMS2P3-208ENST00000533167 UGGT1Q9NYU2 1555 aa12.42□□□□□ -0.42
PMS2P3-208ENST00000533167 CLTCQ00610 1675 aaKnown RBP12.42□□□□□ -0.42
PMS2P3-208ENST00000533167 CLTCL1P53675 1640 aa12.41□□□□□ -0.42
PMS2P3-208ENST00000533167 NEURL4Q96JN8 1562 aa12.41□□□□□ -0.42
PMS2P3-208ENST00000533167 PIK3C2BO00750 1634 aa12.4□□□□□ -0.42
PMS2P3-208ENST00000533167 SPHKAPQ2M3C7 1700 aa12.4□□□□□ -0.42
PMS2P3-208ENST00000533167 L3MBTL2Q969R5 705 aa12.4□□□□□ -0.42
PMS2P3-208ENST00000533167 MROH2AA6NES4 1674 aa12.4□□□□□ -0.42
PMS2P3-208ENST00000533167 MADDQ8WXG6 1647 aa12.38□□□□□ -0.43
PMS2P3-208ENST00000533167 PPP1R15AO75807 674 aaPredicted RBP12.38□□□□□ -0.43
PMS2P3-208ENST00000533167 IDI1Q13907 227 aa12.38□□□□□ -0.43
PMS2P3-208ENST00000533167 PREX1Q8TCU6 1659 aa12.38□□□□□ -0.43
PMS2P3-208ENST00000533167 ADGRB3O60242 1522 aa12.37□□□□□ -0.43
PMS2P3-208ENST00000533167 SLC52A1Q9NWF4 448 aa12.37□□□□□ -0.43
PMS2P3-208ENST00000533167 TONSLQ96HA7 1378 aa12.36□□□□□ -0.43
PMS2P3-208ENST00000533167 CEBPAP49715 358 aaPredicted RBP12.36□□□□□ -0.43
PMS2P3-208ENST00000533167 TNRQ92752 1358 aa12.35□□□□□ -0.43
PMS2P3-208ENST00000533167 UHRF1BP1Q6BDS2 1440 aa12.35□□□□□ -0.43
PMS2P3-208ENST00000533167 FER1L4A9Z1Z3 1794 aa12.34□□□□□ -0.43
PMS2P3-208ENST00000533167 NBPF8Q3BBV2 869 aa12.34□□□□□ -0.43
PMS2P3-208ENST00000533167 C3P01024 1663 aa12.33□□□□□ -0.44
PMS2P3-208ENST00000533167 KDM4FA0A1W2PPD8 638 aa12.33□□□□□ -0.44
PMS2P3-208ENST00000533167 ESF1Q9H501 851 aaKnown RBP12.33□□□□□ -0.44
PMS2P3-208ENST00000533167 PTPRMP28827 1452 aa12.33□□□□□ -0.44
PMS2P3-208ENST00000533167 TMEM131LA2VDJ0 1609 aa12.31□□□□□ -0.44
PMS2P3-208ENST00000533167 A2ML1A8K2U0 1454 aa12.31□□□□□ -0.44
PMS2P3-208ENST00000533167 NLRP1Q9C000 1473 aa12.31□□□□□ -0.44
PMS2P3-208ENST00000533167 NRXN1Q9ULB1 1477 aa12.31□□□□□ -0.44
PMS2P3-208ENST00000533167 RIMS1Q86UR5 1692 aaKnown RBP12.31□□□□□ -0.44
PMS2P3-208ENST00000533167 PRAG1Q86YV5 1406 aa12.29□□□□□ -0.44
PMS2P3-208ENST00000533167 MYOM2P54296 1465 aa12.29□□□□□ -0.44
PMS2P3-208ENST00000533167 RGL3Q3MIN7 710 aa12.29□□□□□ -0.44
PMS2P3-208ENST00000533167 RPGRIP1LQ68CZ1 1315 aa12.29□□□□□ -0.44
PMS2P3-208ENST00000533167 ZFYVE9O95405 1425 aa12.28□□□□□ -0.44
PMS2P3-208ENST00000533167 NEXMIFQ5QGS0 1516 aa12.28□□□□□ -0.44
PMS2P3-208ENST00000533167 STAC3Q96MF2 364 aa12.28□□□□□ -0.44
PMS2P3-208ENST00000533167 DCAF11Q8TEB1 546 aa12.27□□□□□ -0.45
PMS2P3-208ENST00000533167 ADGRF5Q8IZF2 1346 aa12.26□□□□□ -0.45
PMS2P3-208ENST00000533167 ARHGAP23Q9P227 1491 aa12.26□□□□□ -0.45
PMS2P3-208ENST00000533167 CFAP65Q6ZU64 1925 aaKnown RBP12.25□□□□□ -0.45
PMS2P3-208ENST00000533167 GPRASP1Q5JY77 1395 aa12.25□□□□□ -0.45
PMS2P3-208ENST00000533167 RALGAPBQ86X10 1494 aa12.25□□□□□ -0.45
PMS2P3-208ENST00000533167 KDM5AP29375 1690 aaKnown RBP12.25□□□□□ -0.45
PMS2P3-208ENST00000533167 PIK3C2GO75747 1445 aa12.24□□□□□ -0.45
PMS2P3-208ENST00000533167 IFT172Q9UG01 1749 aa12.24□□□□□ -0.45
PMS2P3-208ENST00000533167 TMEM2Q9UHN6 1383 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms