RNA–Protein interactions for RNA: ENST00000533048.5

NXF1-214, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-214ENST00000533048 MYT1LQ9UL68 1186 aa21.95■■□□□ 1.1
NXF1-214ENST00000533048 PRDM15P57071 1507 aaPredicted RBP21.94■■□□□ 1.1
NXF1-214ENST00000533048 AGLP35573 1532 aa21.93■■□□□ 1.1
NXF1-214ENST00000533048 MROH1Q8NDA8 1641 aa21.93■■□□□ 1.1
NXF1-214ENST00000533048 IQGAP3Q86VI3 1631 aa21.91■■□□□ 1.1
NXF1-214ENST00000533048 PZPP20742 1482 aa21.91■■□□□ 1.1
NXF1-214ENST00000533048 VWDEQ8N2E2 1590 aa21.91■■□□□ 1.1
NXF1-214ENST00000533048 SIGLEC1Q9BZZ2 1709 aa21.87■■□□□ 1.09
NXF1-214ENST00000533048 FAM135AQ9P2D6 1515 aa21.86■■□□□ 1.09
NXF1-214ENST00000533048 NUP155O75694 1391 aa21.86■■□□□ 1.09
NXF1-214ENST00000533048 CLSPNQ9HAW4 1339 aa21.85■■□□□ 1.09
NXF1-214ENST00000533048 TRIM52Q96A61 297 aa21.84■■□□□ 1.09
NXF1-214ENST00000533048 KIF3BO15066 747 aa21.83■■□□□ 1.09
NXF1-214ENST00000533048 LMTK2Q8IWU2 1503 aa21.82■■□□□ 1.08
NXF1-214ENST00000533048 CCER1Q8TC90 406 aaPredicted RBP21.82■■□□□ 1.08
NXF1-214ENST00000533048 MPHOSPH9Q99550 1183 aa21.81■■□□□ 1.08
NXF1-214ENST00000533048 TET3O43151 1660 aa21.8■■□□□ 1.08
NXF1-214ENST00000533048 ZC3H13Q5T200 1668 aaKnown RBP21.8■■□□□ 1.08
NXF1-214ENST00000533048 KANK1Q14678 1352 aa21.78■■□□□ 1.08
NXF1-214ENST00000533048 SLC4A1APQ9BWU0 796 aaKnown RBP21.76■■□□□ 1.07
NXF1-214ENST00000533048 ABCC3O15438 1527 aa21.75■■□□□ 1.07
NXF1-214ENST00000533048 CEP152O94986 1710 aa21.75■■□□□ 1.07
NXF1-214ENST00000533048 EFCAB6Q5THR3 1501 aa21.75■■□□□ 1.07
NXF1-214ENST00000533048 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.73■■□□□ 1.072e-7■■□□□ 13.4
NXF1-214ENST00000533048 PPP6R1Q9UPN7 881 aa21.73■■□□□ 1.07
NXF1-214ENST00000533048 E9PCH4 1651 aa21.72■■□□□ 1.07
NXF1-214ENST00000533048 CAMSAP1Q5T5Y3 1602 aa21.7■■□□□ 1.06
NXF1-214ENST00000533048 ANKRD30BQ9BXX2 1392 aa21.7■■□□□ 1.06
NXF1-214ENST00000533048 PKD2Q13563 968 aa21.69■■□□□ 1.06
NXF1-214ENST00000533048 GGT6Q6P531 493 aa21.69■■□□□ 1.06
NXF1-214ENST00000533048 RPRD2Q5VT52 1461 aaKnown RBP21.69■■□□□ 1.06
NXF1-214ENST00000533048 ARHGAP31Q2M1Z3 1444 aa21.68■■□□□ 1.06
NXF1-214ENST00000533048 SPHKAPQ2M3C7 1700 aa21.64■■□□□ 1.06
NXF1-214ENST00000533048 WASHC2CQ9Y4E1 1318 aa21.64■■□□□ 1.05
NXF1-214ENST00000533048 PTPRTO14522 1441 aa21.63■■□□□ 1.05
NXF1-214ENST00000533048 PLA2R1Q13018 1463 aa21.63■■□□□ 1.05
NXF1-214ENST00000533048 NPATQ14207 1427 aa21.63■■□□□ 1.05
NXF1-214ENST00000533048 CLTCQ00610 1675 aaKnown RBP21.63■■□□□ 1.05
NXF1-214ENST00000533048 TRPM2O94759 1503 aa21.62■■□□□ 1.05
NXF1-214ENST00000533048 FOXD1Q16676 465 aa21.62■■□□□ 1.05
NXF1-214ENST00000533048 MROH2AA6NES4 1674 aa21.62■■□□□ 1.05
NXF1-214ENST00000533048 CNTLNQ9NXG0 1405 aa21.6■■□□□ 1.05
NXF1-214ENST00000533048 ZEB1P37275 1124 aaPredicted RBP21.59■■□□□ 1.05
NXF1-214ENST00000533048 ARID4BQ4LE39 1312 aaPredicted RBP21.58■■□□□ 1.05
NXF1-214ENST00000533048 FER1L4A9Z1Z3 1794 aa21.57■■□□□ 1.04
NXF1-214ENST00000533048 NOS1P29475 1434 aa21.56■■□□□ 1.04
NXF1-214ENST00000533048 ADAMTSL3P82987 1691 aa21.55■■□□□ 1.04
NXF1-214ENST00000533048 PREX1Q8TCU6 1659 aa21.55■■□□□ 1.04
NXF1-214ENST00000533048 MLECQ14165 292 aa21.53■■□□□ 1.04
NXF1-214ENST00000533048 SIN3AQ96ST3 1273 aa21.53■■□□□ 1.04
NXF1-214ENST00000533048 TIMELESSQ9UNS1 1208 aa21.53■■□□□ 1.04
NXF1-214ENST00000533048 CCDC144AA2RUR9 1427 aa21.53■■□□□ 1.04
NXF1-214ENST00000533048 CLTCL1P53675 1640 aa21.52■■□□□ 1.04
NXF1-214ENST00000533048 SPATA31D1Q6ZQQ2 1576 aa21.52■■□□□ 1.04
NXF1-214ENST00000533048 NEURL4Q96JN8 1562 aa21.52■■□□□ 1.04
NXF1-214ENST00000533048 PIK3C2BO00750 1634 aa21.51■■□□□ 1.03
NXF1-214ENST00000533048 SYNMO15061 1565 aa21.51■■□□□ 1.03
NXF1-214ENST00000533048 ERVK-7P63135 1459 aa21.51■■□□□ 1.03
NXF1-214ENST00000533048 MADDQ8WXG6 1647 aa21.49■■□□□ 1.03
NXF1-214ENST00000533048 ZMYM3Q14202 1370 aa21.48■■□□□ 1.03
NXF1-214ENST00000533048 CFAP65Q6ZU64 1925 aaKnown RBP21.47■■□□□ 1.03
NXF1-214ENST00000533048 ESF1Q9H501 851 aaKnown RBP21.47■■□□□ 1.03
NXF1-214ENST00000533048 C3P01024 1663 aa21.47■■□□□ 1.03
NXF1-214ENST00000533048 UGGT1Q9NYU2 1555 aa21.45■■□□□ 1.02
NXF1-214ENST00000533048 NEUROD1Q13562 356 aa21.45■■□□□ 1.02
NXF1-214ENST00000533048 TONSLQ96HA7 1378 aa21.44■■□□□ 1.02
NXF1-214ENST00000533048 SPATA31E1Q6ZUB1 1445 aa21.44■■□□□ 1.02
NXF1-214ENST00000533048 RIMS1Q86UR5 1692 aaKnown RBP21.44■■□□□ 1.02
NXF1-214ENST00000533048 KIF1BO60333 1816 aa21.43■■□□□ 1.02
NXF1-214ENST00000533048 ADGRB3O60242 1522 aa21.41■■□□□ 1.02
NXF1-214ENST00000533048 SLC52A1Q9NWF4 448 aa21.39■■□□□ 1.01
NXF1-214ENST00000533048 FBXO31Q5XUX0 539 aaPredicted RBP21.38■■□□□ 1.01
NXF1-214ENST00000533048 KDM5AP29375 1690 aaKnown RBP21.36■■□□□ 1.01
NXF1-214ENST00000533048 TMEM131LA2VDJ0 1609 aa21.35■■□□□ 1.01
NXF1-214ENST00000533048 TNRQ92752 1358 aa21.35■■□□□ 1.01
NXF1-214ENST00000533048 L3MBTL2Q969R5 705 aa21.34■■□□□ 1.01
NXF1-214ENST00000533048 NLRP1Q9C000 1473 aa21.33■■□□□ 1.01
NXF1-214ENST00000533048 IFT172Q9UG01 1749 aa21.33■■□□□ 1.01
NXF1-214ENST00000533048 PPP1R15AO75807 674 aaPredicted RBP21.31■■□□□ 1
NXF1-214ENST00000533048 IDI1Q13907 227 aa21.31■■□□□ 1
NXF1-214ENST00000533048 PTPRMP28827 1452 aa21.3■■□□□ 1
NXF1-214ENST00000533048 UHRF1BP1Q6BDS2 1440 aa21.29■■□□□ 1
NXF1-214ENST00000533048 MYO5BQ9ULV0 1848 aa21.29■■□□□ 1
NXF1-214ENST00000533048 MYO3AQ8NEV4 1616 aa21.29■■□□□ 1
NXF1-214ENST00000533048 CEBPAP49715 358 aaPredicted RBP21.28■■□□□ 1
NXF1-214ENST00000533048 PPLO60437 1756 aa21.28■■□□□ 1
NXF1-214ENST00000533048 MYOM2P54296 1465 aa21.27■■□□□ 1
NXF1-214ENST00000533048 STAC3Q96MF2 364 aa21.27■■□□□ 1
NXF1-214ENST00000533048 UBR1Q8IWV7 1749 aa21.26■□□□□ 0.99
NXF1-214ENST00000533048 A2ML1A8K2U0 1454 aa21.26■□□□□ 0.99
NXF1-214ENST00000533048 NEXMIFQ5QGS0 1516 aa21.25■□□□□ 0.99
NXF1-214ENST00000533048 ZNF142P52746 1687 aaPredicted RBP21.25■□□□□ 0.99
NXF1-214ENST00000533048 SETD1BQ9UPS6 1966 aaKnown RBP21.25■□□□□ 0.99
NXF1-214ENST00000533048 RPGRIP1LQ68CZ1 1315 aa21.25■□□□□ 0.99
NXF1-214ENST00000533048 RGL3Q3MIN7 710 aa21.23■□□□□ 0.99
NXF1-214ENST00000533048 NRXN1Q9ULB1 1477 aa21.23■□□□□ 0.99
NXF1-214ENST00000533048 PRAG1Q86YV5 1406 aa21.22■□□□□ 0.99
NXF1-214ENST00000533048 DCAF11Q8TEB1 546 aa21.21■□□□□ 0.99
NXF1-214ENST00000533048 CEP170BQ9Y4F5 1589 aaPredicted RBP21.21■□□□□ 0.99
NXF1-214ENST00000533048 ZFYVE9O95405 1425 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms