RNA–Protein interactions for RNA: ENST00000532997.5

BDNF-216, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-216ENST00000532997 IFT140Q96RY7 1462 aa12.23□□□□□ -0.45
BDNF-216ENST00000532997 MRC2Q9UBG0 1479 aa12.23□□□□□ -0.45
BDNF-216ENST00000532997 PRG4Q92954 1404 aaPredicted RBP12.23□□□□□ -0.45
BDNF-216ENST00000532997 C9orf84Q5VXU9 1444 aa12.22□□□□□ -0.45
BDNF-216ENST00000532997 KIF14Q15058 1648 aa12.22□□□□□ -0.45
BDNF-216ENST00000532997 BACH2Q9BYV9 841 aa12.22□□□□□ -0.45
BDNF-216ENST00000532997 RAPGEF6Q8TEU7 1601 aa12.21□□□□□ -0.45
BDNF-216ENST00000532997 KDM6BO15054 1643 aa12.21□□□□□ -0.45
BDNF-216ENST00000532997 ADAMTS12P58397 1594 aa12.21□□□□□ -0.45
BDNF-216ENST00000532997 CRBNQ96SW2 442 aa12.2□□□□□ -0.46
BDNF-216ENST00000532997 JPH4Q96JJ6 628 aa12.2□□□□□ -0.46
BDNF-216ENST00000532997 ARHGEF12Q9NZN5 1544 aa12.2□□□□□ -0.46
BDNF-216ENST00000532997 GOLGA2Q08379 1002 aa12.2□□□□□ -0.46
BDNF-216ENST00000532997 PZPP20742 1482 aa12.2□□□□□ -0.46
BDNF-216ENST00000532997 HNRNPMP52272 730 aaKnown RBP eCLIP12.19□□□□□ -0.46
BDNF-216ENST00000532997 PLEKHH2Q8IVE3 1493 aa12.19□□□□□ -0.46
BDNF-216ENST00000532997 PANK3Q9H999 370 aa12.19□□□□□ -0.46
BDNF-216ENST00000532997 RGS3P49796 1198 aa12.18□□□□□ -0.46
BDNF-216ENST00000532997 FAM161AQ3B820 660 aa12.18□□□□□ -0.46
BDNF-216ENST00000532997 PBRM1Q86U86 1689 aa12.18□□□□□ -0.46
BDNF-216ENST00000532997 UHRF1BP1Q6BDS2 1440 aa12.18□□□□□ -0.46
BDNF-216ENST00000532997 POLR1AO95602 1720 aaPredicted RBP12.18□□□□□ -0.46
BDNF-216ENST00000532997 NUP153P49790 1475 aaKnown RBP12.18□□□□□ -0.46
BDNF-216ENST00000532997 LRRIQ1Q96JM4 1722 aa12.18□□□□□ -0.46
BDNF-216ENST00000532997 ADGBQ8N7X0 1667 aa12.17□□□□□ -0.46
BDNF-216ENST00000532997 KIAA0556O60303 1618 aa12.17□□□□□ -0.46
BDNF-216ENST00000532997 DENND4BO75064 1496 aaPredicted RBP12.17□□□□□ -0.46
BDNF-216ENST00000532997 ADGRL2O95490 1459 aa12.17□□□□□ -0.46
BDNF-216ENST00000532997 LRPPRCP42704 1394 aaKnown RBP12.17□□□□□ -0.46
BDNF-216ENST00000532997 GPATCH8Q9UKJ3 1502 aaKnown RBP12.16□□□□□ -0.46
BDNF-216ENST00000532997 PLIN1O60240 522 aa12.16□□□□□ -0.46
BDNF-216ENST00000532997 RTN4Q9NQC3 1192 aaKnown RBP12.16□□□□□ -0.46
BDNF-216ENST00000532997 ERCC6Q03468 1493 aa12.16□□□□□ -0.46
BDNF-216ENST00000532997 GSE1Q14687 1217 aa12.16□□□□□ -0.46
BDNF-216ENST00000532997 EIF3AQ14152 1382 aaKnown RBP12.15□□□□□ -0.46
BDNF-216ENST00000532997 NGEFQ8N5V2 710 aa12.14□□□□□ -0.47
BDNF-216ENST00000532997 GRIN2AQ12879 1464 aa12.14□□□□□ -0.47
BDNF-216ENST00000532997 EIF5BO60841 1220 aaKnown RBP12.14□□□□□ -0.47
BDNF-216ENST00000532997 CDCA7LQ96GN5 454 aa12.14□□□□□ -0.47
BDNF-216ENST00000532997 SHANK2Q9UPX8 1470 aa12.13□□□□□ -0.47
BDNF-216ENST00000532997 TARBP1Q13395 1621 aaKnown RBP12.12□□□□□ -0.47
BDNF-216ENST00000532997 KDM5CP41229 1560 aa12.12□□□□□ -0.47
BDNF-216ENST00000532997 STAC3Q96MF2 364 aa12.12□□□□□ -0.47
BDNF-216ENST00000532997 PARD3Q8TEW0 1356 aa12.12□□□□□ -0.47
BDNF-216ENST00000532997 MBD5Q9P267 1494 aa12.11□□□□□ -0.47
BDNF-216ENST00000532997 INSRP06213 1382 aa12.11□□□□□ -0.47
BDNF-216ENST00000532997 ERBINQ96RT1 1412 aa12.11□□□□□ -0.47
BDNF-216ENST00000532997 SYNJ2O15056 1496 aa12.11□□□□□ -0.47
BDNF-216ENST00000532997 MAGI1Q96QZ7 1491 aaPredicted RBP12.1□□□□□ -0.47
BDNF-216ENST00000532997 L1TD1Q5T7N2 865 aaKnown RBP12.1□□□□□ -0.47
BDNF-216ENST00000532997 MAPK8IP3Q9UPT6 1336 aa12.1□□□□□ -0.47
BDNF-216ENST00000532997 PLB1Q6P1J6 1458 aa12.1□□□□□ -0.47
BDNF-216ENST00000532997 CGNL1Q0VF96 1302 aa12.09□□□□□ -0.47
BDNF-216ENST00000532997 NFKBIBQ15653 356 aa12.09□□□□□ -0.47
BDNF-216ENST00000532997 CCDC141Q6ZP82 1450 aa12.09□□□□□ -0.47
BDNF-216ENST00000532997 CFAP53Q96M91 514 aa12.09□□□□□ -0.47
BDNF-216ENST00000532997 E9PSI1 815 aa12.09□□□□□ -0.47
BDNF-216ENST00000532997 KANK1Q14678 1352 aa12.08□□□□□ -0.47
BDNF-216ENST00000532997 DISP1Q96F81 1524 aa12.08□□□□□ -0.48
BDNF-216ENST00000532997 PTPRGP23470 1445 aa12.08□□□□□ -0.48
BDNF-216ENST00000532997 ADAMTS8Q9UP79 889 aa12.08□□□□□ -0.48
BDNF-216ENST00000532997 NBPF1Q3BBV0 1214 aa12.07□□□□□ -0.48
BDNF-216ENST00000532997 PMFBP1Q8TBY8 1022 aa12.07□□□□□ -0.48
BDNF-216ENST00000532997 EFCAB2Q5VUJ9 269 aa12.06□□□□□ -0.48
BDNF-216ENST00000532997 CENPJQ9HC77 1338 aaPredicted RBP12.06□□□□□ -0.48
BDNF-216ENST00000532997 PRAG1Q86YV5 1406 aa12.05□□□□□ -0.48
BDNF-216ENST00000532997 PPP2R1AP30153 589 aa12.05□□□□□ -0.48
BDNF-216ENST00000532997 FRAT1Q92837 279 aaPredicted RBP12.05□□□□□ -0.48
BDNF-216ENST00000532997 BCORL1Q5H9F3 1711 aa12.05□□□□□ -0.48
BDNF-216ENST00000532997 AAMPQ13685 434 aa12.05□□□□□ -0.48
BDNF-216ENST00000532997 EIF2AK4Q9P2K8 1649 aaKnown RBP12.04□□□□□ -0.48
BDNF-216ENST00000532997 SLC4A3P48751 1232 aa12.04□□□□□ -0.48
BDNF-216ENST00000532997 ZNF608Q9ULD9 1512 aaPredicted RBP12.03□□□□□ -0.48
BDNF-216ENST00000532997 NINLQ9Y2I6 1382 aa12.03□□□□□ -0.48
BDNF-216ENST00000532997 NUP160Q12769 1436 aa12.03□□□□□ -0.48
BDNF-216ENST00000532997 ARHGAP5Q13017 1502 aa12.03□□□□□ -0.48
BDNF-216ENST00000532997 CCDC146Q8IYE0 955 aa12.03□□□□□ -0.48
BDNF-216ENST00000532997 IL27Q8NEV9 243 aa12.03□□□□□ -0.48
BDNF-216ENST00000532997 CHGAP10645 457 aaKnown RBP12.02□□□□□ -0.48
BDNF-216ENST00000532997 RWDD1Q9H446 243 aaPredicted RBP12.02□□□□□ -0.48
BDNF-216ENST00000532997 GLIPR1L2Q4G1C9 344 aa12.02□□□□□ -0.49
BDNF-216ENST00000532997 FTSJ3Q8IY81 847 aaKnown RBP12.02□□□□□ -0.49
BDNF-216ENST00000532997 COL17A1Q9UMD9 1497 aaPredicted RBP12.02□□□□□ -0.49
BDNF-216ENST00000532997 ZMYM4Q5VZL5 1548 aa12.02□□□□□ -0.49
BDNF-216ENST00000532997 FAM135AQ9P2D6 1515 aa12.02□□□□□ -0.49
BDNF-216ENST00000532997 APAF1O14727 1248 aa12.01□□□□□ -0.49
BDNF-216ENST00000532997 SCAPERQ9BY12 1400 aa12.01□□□□□ -0.49
BDNF-216ENST00000532997 MORC1Q86VD1 984 aa12.01□□□□□ -0.49
BDNF-216ENST00000532997 BLMP54132 1417 aaPredicted RBP12□□□□□ -0.49
BDNF-216ENST00000532997 PDE3AQ14432 1141 aa12□□□□□ -0.49
BDNF-216ENST00000532997 PER1O15534 1290 aaPredicted RBP12□□□□□ -0.49
BDNF-216ENST00000532997 NEUROD2Q15784 382 aa12□□□□□ -0.49
BDNF-216ENST00000532997 HSP90AA1P07900 732 aaKnown RBP12□□□□□ -0.49
BDNF-216ENST00000532997 KDM5DQ9BY66 1539 aa12□□□□□ -0.49
BDNF-216ENST00000532997 GPRASP1Q5JY77 1395 aa11.99□□□□□ -0.49
BDNF-216ENST00000532997 DISP3Q9P2K9 1392 aa11.99□□□□□ -0.49
BDNF-216ENST00000532997 ANP32BQ92688 251 aaKnown RBP11.99□□□□□ -0.49
BDNF-216ENST00000532997 MYH16Q9H6N6 1097 aa11.99□□□□□ -0.49
BDNF-216ENST00000532997 SPAG9O60271 1321 aaKnown RBP11.99□□□□□ -0.49
BDNF-216ENST00000532997 ADCY10Q96PN6 1610 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms