RNA–Protein interactions for RNA: ENST00000532942.5

RCN1-210, Transcript of reticulocalbin 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RCN1, Length 1,191 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCN1-210ENST00000532942 ZNF142P52746 1687 aaPredicted RBP23.84■■□□□ 1.41
RCN1-210ENST00000532942 ZNF335Q9H4Z2 1342 aaPredicted RBP23.84■■□□□ 1.41
RCN1-210ENST00000532942 WASHC2CQ9Y4E1 1318 aa23.84■■□□□ 1.41
RCN1-210ENST00000532942 TCOF1Q13428 1488 aaKnown RBP23.83■■□□□ 1.41
RCN1-210ENST00000532942 ARHGEF5Q12774 1597 aa23.82■■□□□ 1.4
RCN1-210ENST00000532942 A2ML1A8K2U0 1454 aa23.82■■□□□ 1.4
RCN1-210ENST00000532942 TNRQ92752 1358 aa23.8■■□□□ 1.4
RCN1-210ENST00000532942 KDM5DQ9BY66 1539 aa23.79■■□□□ 1.4
RCN1-210ENST00000532942 IQSEC2Q5JU85 1478 aa23.79■■□□□ 1.4
RCN1-210ENST00000532942 PZPP20742 1482 aa23.78■■□□□ 1.4
RCN1-210ENST00000532942 MAP3K1Q13233 1512 aa23.77■■□□□ 1.4
RCN1-210ENST00000532942 FAM135AQ9P2D6 1515 aa23.77■■□□□ 1.4
RCN1-210ENST00000532942 DNMT1P26358 1616 aaKnown RBP23.76■■□□□ 1.39
RCN1-210ENST00000532942 MYOM3Q5VTT5 1437 aa23.74■■□□□ 1.39
RCN1-210ENST00000532942 MIA2Q96PC5 1412 aa23.74■■□□□ 1.39
RCN1-210ENST00000532942 MAST1Q9Y2H9 1570 aa23.71■■□□□ 1.39
RCN1-210ENST00000532942 DISP3Q9P2K9 1392 aa23.69■■□□□ 1.38
RCN1-210ENST00000532942 UBAP1LF5GYI3 381 aa23.69■■□□□ 1.38
RCN1-210ENST00000532942 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.68■■□□□ 1.38
RCN1-210ENST00000532942 THEMISQ8N1K5 641 aaPredicted RBP23.68■■□□□ 1.38
RCN1-210ENST00000532942 ANKLE2Q86XL3 938 aa23.67■■□□□ 1.38
RCN1-210ENST00000532942 NLRP1Q9C000 1473 aa23.67■■□□□ 1.38
RCN1-210ENST00000532942 ABCC3O15438 1527 aa23.65■■□□□ 1.38
RCN1-210ENST00000532942 RNF17Q9BXT8 1623 aaKnown RBP23.65■■□□□ 1.38
RCN1-210ENST00000532942 APLP2Q06481 763 aa23.64■■□□□ 1.37
RCN1-210ENST00000532942 NEURL4Q96JN8 1562 aa23.63■■□□□ 1.37
RCN1-210ENST00000532942 UGGT1Q9NYU2 1555 aa23.62■■□□□ 1.37
RCN1-210ENST00000532942 ILDR2Q71H61 639 aa23.61■■□□□ 1.37
RCN1-210ENST00000532942 ABCC5O15440 1437 aa23.6■■□□□ 1.37
RCN1-210ENST00000532942 EIF2AK4Q9P2K8 1649 aaKnown RBP23.6■■□□□ 1.37
RCN1-210ENST00000532942 DUOX2Q9NRD8 1548 aa23.59■■□□□ 1.37
RCN1-210ENST00000532942 MROH1Q8NDA8 1641 aa23.59■■□□□ 1.37
RCN1-210ENST00000532942 RRP7BPQ9NSQ0 103 aa23.59■■□□□ 1.37
RCN1-210ENST00000532942 SPATA31D1Q6ZQQ2 1576 aa23.58■■□□□ 1.37
RCN1-210ENST00000532942 ERVK-7P63135 1459 aa23.58■■□□□ 1.37
RCN1-210ENST00000532942 SHANK2Q9UPX8 1470 aa23.58■■□□□ 1.37
RCN1-210ENST00000532942 KIF15Q9NS87 1388 aa23.58■■□□□ 1.37
RCN1-210ENST00000532942 NPHP4O75161 1426 aaPredicted RBP23.58■■□□□ 1.36
RCN1-210ENST00000532942 POLR1AO95602 1720 aaPredicted RBP23.57■■□□□ 1.36
RCN1-210ENST00000532942 ZC3H13Q5T200 1668 aaKnown RBP23.56■■□□□ 1.36
RCN1-210ENST00000532942 MED14O60244 1454 aa23.56■■□□□ 1.36
RCN1-210ENST00000532942 CPS1P31327 1500 aa23.54■■□□□ 1.36
RCN1-210ENST00000532942 PTPN23Q9H3S7 1636 aa23.54■■□□□ 1.36
RCN1-210ENST00000532942 DAPK1P53355 1430 aa23.52■■□□□ 1.36
RCN1-210ENST00000532942 FGD6Q6ZV73 1430 aa23.52■■□□□ 1.36
RCN1-210ENST00000532942 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.52■■□□□ 1.36
RCN1-210ENST00000532942 VWDEQ8N2E2 1590 aa23.52■■□□□ 1.36
RCN1-210ENST00000532942 DEPDC5O75140 1603 aa23.51■■□□□ 1.35
RCN1-210ENST00000532942 ERBINQ96RT1 1412 aa23.51■■□□□ 1.35
RCN1-210ENST00000532942 TOM1O60784 492 aa23.5■■□□□ 1.35
RCN1-210ENST00000532942 PIP4K2BP78356 416 aa23.5■■□□□ 1.35
RCN1-210ENST00000532942 CHIC2Q9UKJ5 165 aa23.5■■□□□ 1.35
RCN1-210ENST00000532942 CEP152O94986 1710 aa23.5■■□□□ 1.35
RCN1-210ENST00000532942 SCAF1Q9H7N4 1312 aaKnown RBP23.49■■□□□ 1.35
RCN1-210ENST00000532942 ARHGAP31Q2M1Z3 1444 aa23.49■■□□□ 1.35
RCN1-210ENST00000532942 PRDM15P57071 1507 aaPredicted RBP23.48■■□□□ 1.35
RCN1-210ENST00000532942 CROCC2H7BZ55 1655 aa23.47■■□□□ 1.35
RCN1-210ENST00000532942 ANKRD30AQ9BXX3 1397 aa23.45■■□□□ 1.34
RCN1-210ENST00000532942 HSPA1LP34931 641 aa23.45■■□□□ 1.34
RCN1-210ENST00000532942 SOCS7O14512 581 aa23.44■■□□□ 1.34
RCN1-210ENST00000532942 LTKP29376 864 aa23.44■■□□□ 1.34
RCN1-210ENST00000532942 IQGAP1P46940 1657 aa23.44■■□□□ 1.34
RCN1-210ENST00000532942 KANK1Q14678 1352 aa23.43■■□□□ 1.34
RCN1-210ENST00000532942 TXNDC2Q86VQ3 553 aa23.43■■□□□ 1.34
RCN1-210ENST00000532942 CFAP65Q6ZU64 1925 aaKnown RBP23.43■■□□□ 1.34
RCN1-210ENST00000532942 UBR1Q8IWV7 1749 aa23.41■■□□□ 1.34
RCN1-210ENST00000532942 SCAF11Q99590 1463 aaKnown RBP23.41■■□□□ 1.34
RCN1-210ENST00000532942 ARHGAP23Q9P227 1491 aa23.4■■□□□ 1.34
RCN1-210ENST00000532942 SLIT1O75093 1534 aa23.38■■□□□ 1.33
RCN1-210ENST00000532942 LRRC7Q96NW7 1537 aa23.38■■□□□ 1.33
RCN1-210ENST00000532942 FAM50AQ14320 339 aaKnown RBP23.37■■□□□ 1.33
RCN1-210ENST00000532942 EID1Q9Y6B2 187 aa23.37■■□□□ 1.33
RCN1-210ENST00000532942 IDI1Q13907 227 aa23.36■■□□□ 1.33
RCN1-210ENST00000532942 STAG3Q9UJ98 1225 aa23.36■■□□□ 1.33
RCN1-210ENST00000532942 LMTK2Q8IWU2 1503 aa23.36■■□□□ 1.33
RCN1-210ENST00000532942 STRCP1A6NGW2 1772 aa23.35■■□□□ 1.33
RCN1-210ENST00000532942 ALKQ9UM73 1620 aa23.35■■□□□ 1.33
RCN1-210ENST00000532942 TMEM2Q9UHN6 1383 aa23.35■■□□□ 1.33
RCN1-210ENST00000532942 ADGRL2O95490 1459 aa23.33■■□□□ 1.33
RCN1-210ENST00000532942 PIK3C2BO00750 1634 aa23.32■■□□□ 1.32
RCN1-210ENST00000532942 NOS1P29475 1434 aa23.29■■□□□ 1.32
RCN1-210ENST00000532942 SYNMO15061 1565 aa23.27■■□□□ 1.32
RCN1-210ENST00000532942 ANKRD50Q9ULJ7 1429 aa23.27■■□□□ 1.32
RCN1-210ENST00000532942 SENP3Q9H4L4 574 aaPredicted RBP23.27■■□□□ 1.32
RCN1-210ENST00000532942 EFCAB6Q5THR3 1501 aa23.27■■□□□ 1.32
RCN1-210ENST00000532942 SLC52A1Q9NWF4 448 aa23.25■■□□□ 1.31
RCN1-210ENST00000532942 MED1Q15648 1581 aaPredicted RBP23.23■■□□□ 1.31
RCN1-210ENST00000532942 SLC26A8Q96RN1 970 aa23.23■■□□□ 1.31
RCN1-210ENST00000532942 KDM5AP29375 1690 aaKnown RBP23.2■■□□□ 1.3
RCN1-210ENST00000532942 KCNA6P17658 529 aa23.2■■□□□ 1.3
RCN1-210ENST00000532942 ADGRB3O60242 1522 aa23.18■■□□□ 1.3
RCN1-210ENST00000532942 RPRD2Q5VT52 1461 aaKnown RBP23.18■■□□□ 1.3
RCN1-210ENST00000532942 TET3O43151 1660 aa23.18■■□□□ 1.3
RCN1-210ENST00000532942 TMEM94Q12767 1356 aa23.17■■□□□ 1.3
RCN1-210ENST00000532942 BCANQ96GW7 911 aa23.16■■□□□ 1.3
RCN1-210ENST00000532942 PROSER2Q86WR7 435 aaPredicted RBP23.15■■□□□ 1.3
RCN1-210ENST00000532942 RBM33Q96EV2 1170 aaKnown RBP23.15■■□□□ 1.3
RCN1-210ENST00000532942 PHF23Q9BUL5 403 aaPredicted RBP23.13■■□□□ 1.29
RCN1-210ENST00000532942 ROCK1Q13464 1354 aa23.13■■□□□ 1.29
RCN1-210ENST00000532942 XIRP1Q702N8 1843 aaKnown RBP23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms