RNA–Protein interactions for RNA: ENST00000532833.1

TRIM29-219, Transcript of tripartite motif containing 29, humanhuman

TSL 4

Gene TRIM29, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM29-219ENST00000532833 KIF3BO15066 747 aa27.73■■■□□ 2.03
TRIM29-219ENST00000532833 CEP162Q5TB80 1403 aa27.73■■■□□ 2.03
TRIM29-219ENST00000532833 TNRQ92752 1358 aa27.73■■■□□ 2.03
TRIM29-219ENST00000532833 POLR1AO95602 1720 aaPredicted RBP27.72■■■□□ 2.03
TRIM29-219ENST00000532833 PZPP20742 1482 aa27.7■■■□□ 2.02
TRIM29-219ENST00000532833 HSPA1LP34931 641 aa27.68■■■□□ 2.02
TRIM29-219ENST00000532833 KDM5DQ9BY66 1539 aa27.67■■■□□ 2.02
TRIM29-219ENST00000532833 CCDC141Q6ZP82 1450 aa27.67■■■□□ 2.02
TRIM29-219ENST00000532833 SHANK2Q9UPX8 1470 aa27.67■■■□□ 2.02
TRIM29-219ENST00000532833 PIP4K2BP78356 416 aa27.66■■■□□ 2.02
TRIM29-219ENST00000532833 CPS1P31327 1500 aa27.66■■■□□ 2.02
TRIM29-219ENST00000532833 SCAF1Q9H7N4 1312 aaKnown RBP27.66■■■□□ 2.02
TRIM29-219ENST00000532833 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.65■■■□□ 2.02
TRIM29-219ENST00000532833 CAMSAP2Q08AD1 1489 aa27.64■■■□□ 2.02
TRIM29-219ENST00000532833 WASHC2CQ9Y4E1 1318 aa27.64■■■□□ 2.01
TRIM29-219ENST00000532833 NCOA2Q15596 1464 aa27.63■■■□□ 2.01
TRIM29-219ENST00000532833 FAM135AQ9P2D6 1515 aa27.62■■■□□ 2.01
TRIM29-219ENST00000532833 TOM1O60784 492 aa27.62■■■□□ 2.01
TRIM29-219ENST00000532833 MIA2Q96PC5 1412 aa27.61■■■□□ 2.01
TRIM29-219ENST00000532833 ANKLE2Q86XL3 938 aa27.61■■■□□ 2.01
TRIM29-219ENST00000532833 VWDEQ8N2E2 1590 aa27.6■■■□□ 2.01
TRIM29-219ENST00000532833 MED1Q15648 1581 aaPredicted RBP27.6■■■□□ 2.01
TRIM29-219ENST00000532833 RSPH4AQ5TD94 716 aa27.59■■■□□ 2.01
TRIM29-219ENST00000532833 THEMISQ8N1K5 641 aaPredicted RBP27.58■■■□□ 2.01
TRIM29-219ENST00000532833 UGGT1Q9NYU2 1555 aa27.57■■■□□ 2
TRIM29-219ENST00000532833 NLRP1Q9C000 1473 aa27.57■■■□□ 2
TRIM29-219ENST00000532833 NPHP4O75161 1426 aaPredicted RBP27.55■■■□□ 2
TRIM29-219ENST00000532833 MED14O60244 1454 aa27.55■■■□□ 2
TRIM29-219ENST00000532833 ALKQ9UM73 1620 aa27.55■■■□□ 2
TRIM29-219ENST00000532833 DEPDC5O75140 1603 aa27.54■■■□□ 2
TRIM29-219ENST00000532833 ARHGEF5Q12774 1597 aa27.54■■■□□ 2
TRIM29-219ENST00000532833 TSPY4P0CV99 314 aa27.5■■□□□ 1.99
TRIM29-219ENST00000532833 TSPY10P0CW01 314 aa27.5■■□□□ 1.99
TRIM29-219ENST00000532833 STRCP1A6NGW2 1772 aa27.49■■□□□ 1.99
TRIM29-219ENST00000532833 IQGAP1P46940 1657 aa27.49■■□□□ 1.99
TRIM29-219ENST00000532833 RNF17Q9BXT8 1623 aaKnown RBP27.48■■□□□ 1.99
TRIM29-219ENST00000532833 ABCC3O15438 1527 aa27.46■■□□□ 1.99
TRIM29-219ENST00000532833 LRRC7Q96NW7 1537 aa27.42■■□□□ 1.98
TRIM29-219ENST00000532833 ERVK-7P63135 1459 aa27.42■■□□□ 1.98
TRIM29-219ENST00000532833 MAST1Q9Y2H9 1570 aa27.42■■□□□ 1.98
TRIM29-219ENST00000532833 ZC3H13Q5T200 1668 aaKnown RBP27.42■■□□□ 1.98
TRIM29-219ENST00000532833 CFAP65Q6ZU64 1925 aaKnown RBP27.41■■□□□ 1.98
TRIM29-219ENST00000532833 MROH1Q8NDA8 1641 aa27.41■■□□□ 1.98
TRIM29-219ENST00000532833 SENP3Q9H4L4 574 aaPredicted RBP27.39■■□□□ 1.98
TRIM29-219ENST00000532833 LRRC9Q6ZRR7 1453 aa27.38■■□□□ 1.97
TRIM29-219ENST00000532833 EIF2AK4Q9P2K8 1649 aaKnown RBP27.38■■□□□ 1.97
TRIM29-219ENST00000532833 CEP152O94986 1710 aa27.37■■□□□ 1.97
TRIM29-219ENST00000532833 UBR1Q8IWV7 1749 aa27.36■■□□□ 1.97
TRIM29-219ENST00000532833 PHF23Q9BUL5 403 aaPredicted RBP27.35■■□□□ 1.97
TRIM29-219ENST00000532833 SYNMO15061 1565 aa27.34■■□□□ 1.97
TRIM29-219ENST00000532833 KANK4Q5T7N3 995 aaPredicted RBP27.32■■□□□ 1.96
TRIM29-219ENST00000532833 LTKP29376 864 aa27.3■■□□□ 1.96
TRIM29-219ENST00000532833 SCAF11Q99590 1463 aaKnown RBP27.3■■□□□ 1.96
TRIM29-219ENST00000532833 VPS8Q8N3P4 1428 aa27.29■■□□□ 1.96
TRIM29-219ENST00000532833 ARHGAP23Q9P227 1491 aa27.27■■□□□ 1.96
TRIM29-219ENST00000532833 DUOX2Q9NRD8 1548 aa27.26■■□□□ 1.96
TRIM29-219ENST00000532833 TXNDC2Q86VQ3 553 aa27.26■■□□□ 1.95
TRIM29-219ENST00000532833 SLIT1O75093 1534 aa27.26■■□□□ 1.95
TRIM29-219ENST00000532833 MYOM3Q5VTT5 1437 aa27.25■■□□□ 1.95
TRIM29-219ENST00000532833 XIRP1Q702N8 1843 aaKnown RBP27.25■■□□□ 1.95
TRIM29-219ENST00000532833 ARHGAP31Q2M1Z3 1444 aa27.22■■□□□ 1.95
TRIM29-219ENST00000532833 PRDM15P57071 1507 aaPredicted RBP27.21■■□□□ 1.95
TRIM29-219ENST00000532833 RGS17Q9UGC6 210 aaPredicted RBP27.2■■□□□ 1.94
TRIM29-219ENST00000532833 MAP3K1Q13233 1512 aa27.19■■□□□ 1.94
TRIM29-219ENST00000532833 KIF15Q9NS87 1388 aa27.19■■□□□ 1.94
TRIM29-219ENST00000532833 LOC105371045A0A1W2PR82 267 aa27.18■■□□□ 1.94
TRIM29-219ENST00000532833 PIK3C2BO00750 1634 aa27.18■■□□□ 1.94
TRIM29-219ENST00000532833 RRP7BPQ9NSQ0 103 aa27.17■■□□□ 1.94
TRIM29-219ENST00000532833 ABCC5O15440 1437 aa27.16■■□□□ 1.94
TRIM29-219ENST00000532833 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.15■■□□□ 1.94
TRIM29-219ENST00000532833 EID1Q9Y6B2 187 aa27.15■■□□□ 1.94
TRIM29-219ENST00000532833 ERBINQ96RT1 1412 aa27.15■■□□□ 1.94
TRIM29-219ENST00000532833 CROCC2H7BZ55 1655 aa27.14■■□□□ 1.94
TRIM29-219ENST00000532833 TMEM2Q9UHN6 1383 aa27.13■■□□□ 1.93
TRIM29-219ENST00000532833 FAM135BQ49AJ0 1406 aa27.09■■□□□ 1.93
TRIM29-219ENST00000532833 PTPN23Q9H3S7 1636 aa27.08■■□□□ 1.93
TRIM29-219ENST00000532833 IDI1Q13907 227 aa27.08■■□□□ 1.93
TRIM29-219ENST00000532833 STAG3Q9UJ98 1225 aa27.08■■□□□ 1.93
TRIM29-219ENST00000532833 TMEM94Q12767 1356 aa27.08■■□□□ 1.93
TRIM29-219ENST00000532833 EFCAB6Q5THR3 1501 aa27.06■■□□□ 1.92
TRIM29-219ENST00000532833 DAPK1P53355 1430 aa27.06■■□□□ 1.92
TRIM29-219ENST00000532833 RBM33Q96EV2 1170 aaKnown RBP27.05■■□□□ 1.92
TRIM29-219ENST00000532833 TET3O43151 1660 aa27.05■■□□□ 1.92
TRIM29-219ENST00000532833 KDM5AP29375 1690 aaKnown RBP27.05■■□□□ 1.92
TRIM29-219ENST00000532833 KCNA6P17658 529 aa27.04■■□□□ 1.92
TRIM29-219ENST00000532833 SLC26A8Q96RN1 970 aa27.04■■□□□ 1.92
TRIM29-219ENST00000532833 KANK1Q14678 1352 aa27.04■■□□□ 1.92
TRIM29-219ENST00000532833 LMTK2Q8IWU2 1503 aa27.03■■□□□ 1.92
TRIM29-219ENST00000532833 ROBO1Q9Y6N7 1651 aa27.01■■□□□ 1.91
TRIM29-219ENST00000532833 POTEAQ6S8J7 498 aa27■■□□□ 1.91
TRIM29-219ENST00000532833 CHIC2Q9UKJ5 165 aa27■■□□□ 1.91
TRIM29-219ENST00000532833 PROSER2Q86WR7 435 aaPredicted RBP26.99■■□□□ 1.91
TRIM29-219ENST00000532833 NOS1P29475 1434 aa26.98■■□□□ 1.91
TRIM29-219ENST00000532833 FGD6Q6ZV73 1430 aa26.97■■□□□ 1.91
TRIM29-219ENST00000532833 ANKRD30AQ9BXX3 1397 aa26.96■■□□□ 1.91
TRIM29-219ENST00000532833 ADGRB3O60242 1522 aa26.95■■□□□ 1.9
TRIM29-219ENST00000532833 NWD1Q149M9 1564 aa26.94■■□□□ 1.9
TRIM29-219ENST00000532833 NKTRP30414 1462 aaKnown RBP26.92■■□□□ 1.9
TRIM29-219ENST00000532833 SLC52A1Q9NWF4 448 aa26.89■■□□□ 1.9
TRIM29-219ENST00000532833 APLP2Q06481 763 aa26.88■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms