RNA–Protein interactions for RNA: ENST00000532793.1

PPFIA1-223, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 3

Gene PPFIA1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-223ENST00000532793 SUPT6HQ7KZ85 1726 aaKnown RBP15.44■□□□□ 0.06
PPFIA1-223ENST00000532793 CEBPAP49715 358 aaPredicted RBP15.44■□□□□ 0.06
PPFIA1-223ENST00000532793 CFDP1Q9UEE9 299 aaPredicted RBP15.44■□□□□ 0.06
PPFIA1-223ENST00000532793 EHBP1L1Q8N3D4 1523 aa15.43■□□□□ 0.06
PPFIA1-223ENST00000532793 SPAG9O60271 1321 aaKnown RBP15.43■□□□□ 0.06
PPFIA1-223ENST00000532793 ATP7AQ04656 1500 aa15.42■□□□□ 0.06
PPFIA1-223ENST00000532793 CNTLNQ9NXG0 1405 aa15.42■□□□□ 0.06
PPFIA1-223ENST00000532793 PRKAR2AP13861 404 aaKnown RBP15.41■□□□□ 0.06
PPFIA1-223ENST00000532793 HNRNPMP52272 730 aaKnown RBP eCLIP15.4■□□□□ 0.06
PPFIA1-223ENST00000532793 PLSCR2Q9NRY7 297 aa15.4■□□□□ 0.06
PPFIA1-223ENST00000532793 MROH2AA6NES4 1674 aa15.4■□□□□ 0.06
PPFIA1-223ENST00000532793 CEP162Q5TB80 1403 aa15.4■□□□□ 0.06
PPFIA1-223ENST00000532793 KIAA1107Q9UPP5 1409 aa15.4■□□□□ 0.06
PPFIA1-223ENST00000532793 ADGBQ8N7X0 1667 aa15.39■□□□□ 0.05
PPFIA1-223ENST00000532793 INO80Q9ULG1 1556 aaPredicted RBP15.39■□□□□ 0.05
PPFIA1-223ENST00000532793 TIAM1Q13009 1591 aa15.38■□□□□ 0.05
PPFIA1-223ENST00000532793 CLTCQ00610 1675 aaKnown RBP15.36■□□□□ 0.05
PPFIA1-223ENST00000532793 STRCQ7RTU9 1775 aa15.36■□□□□ 0.05
PPFIA1-223ENST00000532793 A2MP01023 1474 aa15.35■□□□□ 0.05
PPFIA1-223ENST00000532793 PLXNC1O60486 1568 aa15.33■□□□□ 0.05
PPFIA1-223ENST00000532793 CERKQ8TCT0 537 aa15.32■□□□□ 0.04
PPFIA1-223ENST00000532793 NPATQ14207 1427 aa15.31■□□□□ 0.04
PPFIA1-223ENST00000532793 GGT6Q6P531 493 aa15.3■□□□□ 0.04
PPFIA1-223ENST00000532793 NCOA2Q15596 1464 aa15.29■□□□□ 0.04
PPFIA1-223ENST00000532793 ZMYM3Q14202 1370 aa15.29■□□□□ 0.04
PPFIA1-223ENST00000532793 MYO3AQ8NEV4 1616 aa15.28■□□□□ 0.04
PPFIA1-223ENST00000532793 CAMSAP2Q08AD1 1489 aa15.27■□□□□ 0.04
PPFIA1-223ENST00000532793 CCDC141Q6ZP82 1450 aa15.27■□□□□ 0.04
PPFIA1-223ENST00000532793 RTEL1-TNFRSF6BF6WH68 1400 aa15.27■□□□□ 0.04
PPFIA1-223ENST00000532793 ZNF644Q9H582 1327 aaPredicted RBP15.27■□□□□ 0.04
PPFIA1-223ENST00000532793 PTPRTO14522 1441 aa15.26■□□□□ 0.03
PPFIA1-223ENST00000532793 ZNF142P52746 1687 aaPredicted RBP15.26■□□□□ 0.03
PPFIA1-223ENST00000532793 CAMSAP1Q5T5Y3 1602 aa15.26■□□□□ 0.03
PPFIA1-223ENST00000532793 MBD5Q9P267 1494 aa15.26■□□□□ 0.03
PPFIA1-223ENST00000532793 RSPH4AQ5TD94 716 aa15.25■□□□□ 0.03
PPFIA1-223ENST00000532793 VPS8Q8N3P4 1428 aa15.25■□□□□ 0.03
PPFIA1-223ENST00000532793 POTEIP0CG38 1075 aa15.24■□□□□ 0.03
PPFIA1-223ENST00000532793 NCOA1Q15788 1441 aa15.24■□□□□ 0.03
PPFIA1-223ENST00000532793 CEP170BQ9Y4F5 1589 aaPredicted RBP15.23■□□□□ 0.03
PPFIA1-223ENST00000532793 TSPY4P0CV99 314 aa15.22■□□□□ 0.03
PPFIA1-223ENST00000532793 TSPY10P0CW01 314 aa15.22■□□□□ 0.03
PPFIA1-223ENST00000532793 ARHGEF5Q12774 1597 aa15.22■□□□□ 0.03
PPFIA1-223ENST00000532793 DHX29Q7Z478 1369 aaKnown RBP15.22■□□□□ 0.03
PPFIA1-223ENST00000532793 FAM135AQ9P2D6 1515 aa15.21■□□□□ 0.03
PPFIA1-223ENST00000532793 LRRC9Q6ZRR7 1453 aa15.2■□□□□ 0.02
PPFIA1-223ENST00000532793 PTPRKQ15262 1439 aa15.2■□□□□ 0.02
PPFIA1-223ENST00000532793 KIF3BO15066 747 aa15.2■□□□□ 0.02
PPFIA1-223ENST00000532793 KDM5DQ9BY66 1539 aa15.2■□□□□ 0.02
PPFIA1-223ENST00000532793 LOC105371045A0A1W2PR82 267 aa15.18■□□□□ 0.02
PPFIA1-223ENST00000532793 CLEC11AQ9Y240 323 aa15.18■□□□□ 0.02
PPFIA1-223ENST00000532793 PLA2R1Q13018 1463 aa15.18■□□□□ 0.02
PPFIA1-223ENST00000532793 SPDYE2BA6NHP3 402 aa15.17■□□□□ 0.02
PPFIA1-223ENST00000532793 SPDYE6P0CI01 402 aa15.17■□□□□ 0.02
PPFIA1-223ENST00000532793 PKD2Q13563 968 aa15.17■□□□□ 0.02
PPFIA1-223ENST00000532793 SPDYE2Q495Y8 402 aa15.17■□□□□ 0.02
PPFIA1-223ENST00000532793 MAP3K1Q13233 1512 aa15.17■□□□□ 0.02
PPFIA1-223ENST00000532793 POLR1AO95602 1720 aaPredicted RBP15.16■□□□□ 0.02
PPFIA1-223ENST00000532793 WASHC2CQ9Y4E1 1318 aa15.16■□□□□ 0.02
PPFIA1-223ENST00000532793 A2ML1A8K2U0 1454 aa15.15■□□□□ 0.02
PPFIA1-223ENST00000532793 IQSEC2Q5JU85 1478 aa15.15■□□□□ 0.02
PPFIA1-223ENST00000532793 ZC3H13Q5T200 1668 aaKnown RBP15.15■□□□□ 0.02
PPFIA1-223ENST00000532793 NCKAP5LQ9HCH0 1330 aa15.15■□□□□ 0.02
PPFIA1-223ENST00000532793 LTBP4Q8N2S1 1624 aa15.14■□□□□ 0.01
PPFIA1-223ENST00000532793 MAST1Q9Y2H9 1570 aa15.14■□□□□ 0.01
PPFIA1-223ENST00000532793 PZPP20742 1482 aa15.14■□□□□ 0.01
PPFIA1-223ENST00000532793 DNMT1P26358 1616 aaKnown RBP15.14■□□□□ 0.01
PPFIA1-223ENST00000532793 EIF2AK4Q9P2K8 1649 aaKnown RBP15.14■□□□□ 0.01
PPFIA1-223ENST00000532793 MYOM3Q5VTT5 1437 aa15.13■□□□□ 0.01
PPFIA1-223ENST00000532793 TNRQ92752 1358 aa15.12■□□□□ 0.01
PPFIA1-223ENST00000532793 MIA2Q96PC5 1412 aa15.12■□□□□ 0.01
PPFIA1-223ENST00000532793 SPDYE1Q8NFV5 336 aaPredicted RBP15.12■□□□□ 0.01
PPFIA1-223ENST00000532793 RNF17Q9BXT8 1623 aaKnown RBP15.11■□□□□ 0.01
PPFIA1-223ENST00000532793 FOXD4L1Q9NU39 408 aa15.11■□□□□ 0.01
PPFIA1-223ENST00000532793 TCOF1Q13428 1488 aaKnown RBP15.11■□□□□ 0.01
PPFIA1-223ENST00000532793 CHADLQ6NUI6 762 aa15.1■□□□□ 0.01
PPFIA1-223ENST00000532793 CROCC2H7BZ55 1655 aa15.09■□□□□ 0.01
PPFIA1-223ENST00000532793 KANK4Q5T7N3 995 aaPredicted RBP15.09■□□□□ 0.01
PPFIA1-223ENST00000532793 ZNF335Q9H4Z2 1342 aaPredicted RBP15.08■□□□□ 0
PPFIA1-223ENST00000532793 CEP152O94986 1710 aa15.08■□□□□ 0
PPFIA1-223ENST00000532793 NLRP1Q9C000 1473 aa15.08■□□□□ 0
PPFIA1-223ENST00000532793 UGGT1Q9NYU2 1555 aa15.07■□□□□ 0
PPFIA1-223ENST00000532793 FBXO31Q5XUX0 539 aaPredicted RBP15.07■□□□□ 0
PPFIA1-223ENST00000532793 CFAP65Q6ZU64 1925 aaKnown RBP15.07■□□□□ 0
PPFIA1-223ENST00000532793 DUOX2Q9NRD8 1548 aa15.07■□□□□ 0
PPFIA1-223ENST00000532793 PTPN23Q9H3S7 1636 aa15.06■□□□□ 0
PPFIA1-223ENST00000532793 THEMISQ8N1K5 641 aaPredicted RBP15.05■□□□□ -0
PPFIA1-223ENST00000532793 ABCC3O15438 1527 aa15.05■□□□□ -0
PPFIA1-223ENST00000532793 ANKLE2Q86XL3 938 aa15.04■□□□□ -0
PPFIA1-223ENST00000532793 SHANK2Q9UPX8 1470 aa15.03■□□□□ -0
PPFIA1-223ENST00000532793 DISP3Q9P2K9 1392 aa15.03■□□□□ -0
PPFIA1-223ENST00000532793 SPATA31D1Q6ZQQ2 1576 aa15.02■□□□□ -0
PPFIA1-223ENST00000532793 NEURL4Q96JN8 1562 aa15.02■□□□□ -0
PPFIA1-223ENST00000532793 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.02■□□□□ -0
PPFIA1-223ENST00000532793 UBAP1LF5GYI3 381 aa15.02■□□□□ -0
PPFIA1-223ENST00000532793 DEPDC5O75140 1603 aa15.02□□□□□ -0.01
PPFIA1-223ENST00000532793 CPS1P31327 1500 aa15.02□□□□□ -0.01
PPFIA1-223ENST00000532793 IQGAP1P46940 1657 aa15.01□□□□□ -0.01
PPFIA1-223ENST00000532793 MROH1Q8NDA8 1641 aa15.01□□□□□ -0.01
PPFIA1-223ENST00000532793 ERBINQ96RT1 1412 aa15□□□□□ -0.01
PPFIA1-223ENST00000532793 KIF15Q9NS87 1388 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms