RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 TIAM1Q13009 1591 aa8.9□□□□□ -0.98
TGFBR3-209ENST00000532540 FANCAO15360 1455 aa8.9□□□□□ -0.98
TGFBR3-209ENST00000532540 ZBTB7CA1YPR0 619 aa8.9□□□□□ -0.98
TGFBR3-209ENST00000532540 NCLP19338 710 aaKnown RBP8.9□□□□□ -0.98
TGFBR3-209ENST00000532540 LMOD2Q6P5Q4 547 aa8.9□□□□□ -0.98
TGFBR3-209ENST00000532540 RBM33Q96EV2 1170 aaKnown RBP8.9□□□□□ -0.98
TGFBR3-209ENST00000532540 ADGRL1O94910 1474 aa8.9□□□□□ -0.98
TGFBR3-209ENST00000532540 TRIM44Q96DX7 344 aaPredicted RBP8.9□□□□□ -0.99
TGFBR3-209ENST00000532540 ABCC2Q92887 1545 aa8.89□□□□□ -0.99
TGFBR3-209ENST00000532540 L1TD1Q5T7N2 865 aaKnown RBP8.89□□□□□ -0.99
TGFBR3-209ENST00000532540 TMC1Q8TDI8 760 aa8.89□□□□□ -0.99
TGFBR3-209ENST00000532540 ZMYND15Q9H091 742 aa8.89□□□□□ -0.99
TGFBR3-209ENST00000532540 L3MBTL2Q969R5 705 aa8.88□□□□□ -0.99
TGFBR3-209ENST00000532540 WDR7Q9Y4E6 1490 aa8.88□□□□□ -0.99
TGFBR3-209ENST00000532540 MRS2Q9HD23 443 aa8.88□□□□□ -0.99
TGFBR3-209ENST00000532540 ANKRD50Q9ULJ7 1429 aa8.88□□□□□ -0.99
TGFBR3-209ENST00000532540 SOX12O15370 315 aa8.88□□□□□ -0.99
TGFBR3-209ENST00000532540 CARD11Q9BXL7 1154 aa8.88□□□□□ -0.99
TGFBR3-209ENST00000532540 RAPGEF6Q8TEU7 1601 aa8.88□□□□□ -0.99
TGFBR3-209ENST00000532540 C9orf84Q5VXU9 1444 aa8.87□□□□□ -0.99
TGFBR3-209ENST00000532540 TRAPPC8Q9Y2L5 1435 aa8.87□□□□□ -0.99
TGFBR3-209ENST00000532540 AKNAQ7Z591 1439 aa8.87□□□□□ -0.99
TGFBR3-209ENST00000532540 HSPA2P54652 639 aa8.87□□□□□ -0.99
TGFBR3-209ENST00000532540 POGKQ9P215 609 aa8.87□□□□□ -0.99
TGFBR3-209ENST00000532540 GPATCH8Q9UKJ3 1502 aaKnown RBP8.86□□□□□ -0.99
TGFBR3-209ENST00000532540 CTTNBP2Q8WZ74 1663 aa8.86□□□□□ -0.99
TGFBR3-209ENST00000532540 WDR97A6NE52 1622 aa8.86□□□□□ -0.99
TGFBR3-209ENST00000532540 TMEM132EQ6IEE7 984 aa8.85□□□□□ -0.99
TGFBR3-209ENST00000532540 SLC26A8Q96RN1 970 aa8.85□□□□□ -0.99
TGFBR3-209ENST00000532540 TRAK1Q9UPV9 953 aa8.85□□□□□ -0.99
TGFBR3-209ENST00000532540 FAM43AQ8N2R8 423 aa8.85□□□□□ -0.99
TGFBR3-209ENST00000532540 EHBP1L1Q8N3D4 1523 aa8.84□□□□□ -0.99
TGFBR3-209ENST00000532540 PTPRKQ15262 1439 aa8.84□□□□□ -0.99
TGFBR3-209ENST00000532540 ABCC5O15440 1437 aa8.83□□□□□ -1
TGFBR3-209ENST00000532540 CAMSAP2Q08AD1 1489 aa8.83□□□□□ -1
TGFBR3-209ENST00000532540 DAPK1P53355 1430 aa8.83□□□□□ -1
TGFBR3-209ENST00000532540 DENND4BO75064 1496 aaPredicted RBP8.83□□□□□ -1
TGFBR3-209ENST00000532540 PLCH2O75038 1416 aa8.82□□□□□ -1
TGFBR3-209ENST00000532540 MAGI3Q5TCQ9 1506 aa8.82□□□□□ -1
TGFBR3-209ENST00000532540 CDK11BP21127 795 aaKnown RBP8.82□□□□□ -1
TGFBR3-209ENST00000532540 TCERG1O14776 1098 aaKnown RBP8.82□□□□□ -1
TGFBR3-209ENST00000532540 RRP9O43818 475 aaKnown RBP8.82□□□□□ -1
TGFBR3-209ENST00000532540 PLEKHH2Q8IVE3 1493 aa8.81□□□□□ -1
TGFBR3-209ENST00000532540 EID1Q9Y6B2 187 aa8.81□□□□□ -1
TGFBR3-209ENST00000532540 TSPOAP1O95153 1857 aa8.81□□□□□ -1
TGFBR3-209ENST00000532540 BECN1Q14457 450 aa8.81□□□□□ -1
TGFBR3-209ENST00000532540 KIF14Q15058 1648 aa8.8□□□□□ -1
TGFBR3-209ENST00000532540 TXNDC2Q86VQ3 553 aa8.8□□□□□ -1
TGFBR3-209ENST00000532540 UPF2Q9HAU5 1272 aaKnown RBP8.8□□□□□ -1
TGFBR3-209ENST00000532540 DHX57Q6P158 1386 aaKnown RBP8.8□□□□□ -1
TGFBR3-209ENST00000532540 CLASP1Q7Z460 1538 aa8.79□□□□□ -1
TGFBR3-209ENST00000532540 SYCP2Q9BX26 1530 aa8.79□□□□□ -1
TGFBR3-209ENST00000532540 EIF4G2P78344 907 aaKnown RBP eCLIP8.79□□□□□ -16e-7■■■■■ 31.9
TGFBR3-209ENST00000532540 SRPK2P78362 688 aaKnown RBP8.79□□□□□ -1
TGFBR3-209ENST00000532540 PDE4CQ08493 712 aa8.79□□□□□ -1
TGFBR3-209ENST00000532540 A0A0G2JS52 829 aa8.79□□□□□ -1
TGFBR3-209ENST00000532540 IDI1Q13907 227 aa8.78□□□□□ -1
TGFBR3-209ENST00000532540 MIA2Q96PC5 1412 aa8.78□□□□□ -1
TGFBR3-209ENST00000532540 RRBP1Q9P2E9 1410 aaKnown RBP8.78□□□□□ -1
TGFBR3-209ENST00000532540 SUPT6HQ7KZ85 1726 aaKnown RBP8.78□□□□□ -1
TGFBR3-209ENST00000532540 CCDC144AA2RUR9 1427 aa8.78□□□□□ -1
TGFBR3-209ENST00000532540 YEATS2Q9ULM3 1422 aa8.78□□□□□ -1
TGFBR3-209ENST00000532540 CFAP70Q5T0N1 1121 aa8.78□□□□□ -1
TGFBR3-209ENST00000532540 FRAT1Q92837 279 aaPredicted RBP8.78□□□□□ -1
TGFBR3-209ENST00000532540 CCDC141Q6ZP82 1450 aa8.77□□□□□ -1
TGFBR3-209ENST00000532540 SAMD9Q5K651 1589 aa8.77□□□□□ -1.01
TGFBR3-209ENST00000532540 C11orf95C9JLR9 678 aaPredicted RBP8.77□□□□□ -1.01
TGFBR3-209ENST00000532540 MINK1Q8N4C8 1332 aaPredicted RBP8.76□□□□□ -1.01
TGFBR3-209ENST00000532540 NBPF1Q3BBV0 1214 aa8.76□□□□□ -1.01
TGFBR3-209ENST00000532540 NCOA1Q15788 1441 aa8.76□□□□□ -1.01
TGFBR3-209ENST00000532540 NAIPQ13075 1403 aa8.76□□□□□ -1.01
TGFBR3-209ENST00000532540 HAP1P54257 671 aaPredicted RBP8.76□□□□□ -1.01
TGFBR3-209ENST00000532540 NFKBIBQ15653 356 aa8.76□□□□□ -1.01
TGFBR3-209ENST00000532540 KDM5BQ9UGL1 1544 aa8.75□□□□□ -1.01
TGFBR3-209ENST00000532540 HDGFP51858 240 aaKnown RBP8.75□□□□□ -1.01
TGFBR3-209ENST00000532540 ABCA8O94911 1581 aa8.75□□□□□ -1.01
TGFBR3-209ENST00000532540 HSPA5P11021 654 aaKnown RBP8.74□□□□□ -1.01
TGFBR3-209ENST00000532540 PDE4AP27815 886 aa8.74□□□□□ -1.01
TGFBR3-209ENST00000532540 PTPN23Q9H3S7 1636 aa8.74□□□□□ -1.01
TGFBR3-209ENST00000532540 ST20-MTHFSA0A0A6YYL1 179 aa8.73□□□□□ -1.01
TGFBR3-209ENST00000532540 GOLGA6L3A6NEY3 463 aa8.73□□□□□ -1.01
TGFBR3-209ENST00000532540 ROCK2O75116 1388 aaKnown RBP8.73□□□□□ -1.01
TGFBR3-209ENST00000532540 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.73□□□□□ -1.01
TGFBR3-209ENST00000532540 CC2D1BQ5T0F9 858 aaKnown RBP8.73□□□□□ -1.01
TGFBR3-209ENST00000532540 ADCY10Q96PN6 1610 aa8.72□□□□□ -1.01
TGFBR3-209ENST00000532540 DHX29Q7Z478 1369 aaKnown RBP8.72□□□□□ -1.01
TGFBR3-209ENST00000532540 VGFO15240 615 aaPredicted RBP8.72□□□□□ -1.01
TGFBR3-209ENST00000532540 AMER1Q5JTC6 1135 aaPredicted RBP8.72□□□□□ -1.01
TGFBR3-209ENST00000532540 TEX14Q8IWB6 1497 aa8.71□□□□□ -1.02
TGFBR3-209ENST00000532540 PIP4K2BP78356 416 aa8.71□□□□□ -1.02
TGFBR3-209ENST00000532540 ZCCHC11Q5TAX3 1644 aaKnown RBP8.71□□□□□ -1.02
TGFBR3-209ENST00000532540 MSNP26038 577 aaKnown RBP8.71□□□□□ -1.02
TGFBR3-209ENST00000532540 NBPF8Q3BBV2 869 aa8.71□□□□□ -1.02
TGFBR3-209ENST00000532540 MYH16Q9H6N6 1097 aa8.71□□□□□ -1.02
TGFBR3-209ENST00000532540 NUTM2GQ5VZR2 741 aa8.7□□□□□ -1.02
TGFBR3-209ENST00000532540 ARID3AQ99856 593 aa8.7□□□□□ -1.02
TGFBR3-209ENST00000532540 XPCQ01831 940 aaPredicted RBP8.7□□□□□ -1.02
TGFBR3-209ENST00000532540 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.7□□□□□ -1.022e-8■■□□□ 11.6
TGFBR3-209ENST00000532540 THEMISQ8N1K5 641 aaPredicted RBP8.7□□□□□ -1.02
TGFBR3-209ENST00000532540 HFM1A2PYH4 1435 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms