RNA–Protein interactions for RNA: ENST00000532501.2

TRIM49-202, Transcript of tripartite motif containing 49, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM49, Length 1,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49-202ENST00000532501 MLH3Q9UHC1 1453 aa12.28□□□□□ -0.44
TRIM49-202ENST00000532501 SIGLEC1Q9BZZ2 1709 aa12.28□□□□□ -0.44
TRIM49-202ENST00000532501 C9orf84Q5VXU9 1444 aa12.28□□□□□ -0.44
TRIM49-202ENST00000532501 ABCA6Q8N139 1617 aa12.28□□□□□ -0.44
TRIM49-202ENST00000532501 HECW2Q9P2P5 1572 aa12.28□□□□□ -0.44
TRIM49-202ENST00000532501 KIDINS220Q9ULH0 1771 aa12.28□□□□□ -0.44
TRIM49-202ENST00000532501 DIP2CQ9Y2E4 1556 aa12.27□□□□□ -0.45
TRIM49-202ENST00000532501 SPAG9O60271 1321 aaKnown RBP12.27□□□□□ -0.45
TRIM49-202ENST00000532501 ATP7AQ04656 1500 aa12.27□□□□□ -0.45
TRIM49-202ENST00000532501 ITGAEP38570 1179 aa12.27□□□□□ -0.45
TRIM49-202ENST00000532501 CHIC2Q9UKJ5 165 aa12.27□□□□□ -0.45
TRIM49-202ENST00000532501 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.25□□□□□ -0.45
TRIM49-202ENST00000532501 SHANK2Q9UPX8 1470 aa12.25□□□□□ -0.45
TRIM49-202ENST00000532501 PRKAR2AP13861 404 aaKnown RBP12.25□□□□□ -0.45
TRIM49-202ENST00000532501 CROCC2H7BZ55 1655 aa12.25□□□□□ -0.45
TRIM49-202ENST00000532501 MAST1Q9Y2H9 1570 aa12.24□□□□□ -0.45
TRIM49-202ENST00000532501 MAGI2Q86UL8 1455 aa12.23□□□□□ -0.45
TRIM49-202ENST00000532501 RTEL1-TNFRSF6BF6WH68 1400 aa12.22□□□□□ -0.45
TRIM49-202ENST00000532501 C19orf67A6NJJ6 358 aa12.22□□□□□ -0.45
TRIM49-202ENST00000532501 ADGRL2O95490 1459 aa12.22□□□□□ -0.45
TRIM49-202ENST00000532501 NCOA1Q15788 1441 aa12.21□□□□□ -0.46
TRIM49-202ENST00000532501 PLXNC1O60486 1568 aa12.2□□□□□ -0.46
TRIM49-202ENST00000532501 ATP10AO60312 1499 aa12.2□□□□□ -0.46
TRIM49-202ENST00000532501 KIF15Q9NS87 1388 aa12.2□□□□□ -0.46
TRIM49-202ENST00000532501 RRP7BPQ9NSQ0 103 aa12.2□□□□□ -0.46
TRIM49-202ENST00000532501 MYT1LQ9UL68 1186 aa12.2□□□□□ -0.46
TRIM49-202ENST00000532501 A2MP01023 1474 aa12.2□□□□□ -0.46
TRIM49-202ENST00000532501 TSPY4P0CV99 314 aa12.2□□□□□ -0.46
TRIM49-202ENST00000532501 TSPY10P0CW01 314 aa12.2□□□□□ -0.46
TRIM49-202ENST00000532501 RSPH4AQ5TD94 716 aa12.2□□□□□ -0.46
TRIM49-202ENST00000532501 ADGBQ8N7X0 1667 aa12.19□□□□□ -0.46
TRIM49-202ENST00000532501 KDM4FA0A1W2PPD8 638 aa12.18□□□□□ -0.46
TRIM49-202ENST00000532501 REREQ9P2R6 1566 aa12.17□□□□□ -0.46
TRIM49-202ENST00000532501 DHX29Q7Z478 1369 aaKnown RBP12.16□□□□□ -0.46
TRIM49-202ENST00000532501 NAIPQ13075 1403 aa12.16□□□□□ -0.46
TRIM49-202ENST00000532501 ROCK1Q13464 1354 aa12.15□□□□□ -0.46
TRIM49-202ENST00000532501 ANKRD30AQ9BXX3 1397 aa12.15□□□□□ -0.46
TRIM49-202ENST00000532501 ATF5Q9Y2D1 282 aaPredicted RBP12.15□□□□□ -0.46
TRIM49-202ENST00000532501 MLECQ14165 292 aa12.14□□□□□ -0.47
TRIM49-202ENST00000532501 AGLP35573 1532 aa12.14□□□□□ -0.47
TRIM49-202ENST00000532501 DUOX2Q9NRD8 1548 aa12.13□□□□□ -0.47
TRIM49-202ENST00000532501 MROH1Q8NDA8 1641 aa12.13□□□□□ -0.47
TRIM49-202ENST00000532501 HFM1A2PYH4 1435 aa12.12□□□□□ -0.47
TRIM49-202ENST00000532501 ANKRD50Q9ULJ7 1429 aa12.12□□□□□ -0.47
TRIM49-202ENST00000532501 KIF3BO15066 747 aa12.11□□□□□ -0.47
TRIM49-202ENST00000532501 ARID4BQ4LE39 1312 aaPredicted RBP12.11□□□□□ -0.47
TRIM49-202ENST00000532501 CLEC11AQ9Y240 323 aa12.11□□□□□ -0.47
TRIM49-202ENST00000532501 ERBINQ96RT1 1412 aa12.1□□□□□ -0.47
TRIM49-202ENST00000532501 BCORL1Q5H9F3 1711 aa12.09□□□□□ -0.47
TRIM49-202ENST00000532501 TRIM26Q12899 539 aaPredicted RBP12.08□□□□□ -0.48
TRIM49-202ENST00000532501 GGT6Q6P531 493 aa12.08□□□□□ -0.48
TRIM49-202ENST00000532501 GCC2Q8IWJ2 1684 aa12.08□□□□□ -0.48
TRIM49-202ENST00000532501 MADDQ8WXG6 1647 aa12.07□□□□□ -0.48
TRIM49-202ENST00000532501 RNF17Q9BXT8 1623 aaKnown RBP12.07□□□□□ -0.48
TRIM49-202ENST00000532501 ADAMTSL3P82987 1691 aa12.07□□□□□ -0.48
TRIM49-202ENST00000532501 EIF2AK4Q9P2K8 1649 aaKnown RBP12.06□□□□□ -0.48
TRIM49-202ENST00000532501 RAB3GAP2Q9H2M9 1393 aa12.06□□□□□ -0.48
TRIM49-202ENST00000532501 PRDM15P57071 1507 aaPredicted RBP12.05□□□□□ -0.48
TRIM49-202ENST00000532501 DEPDC5O75140 1603 aa12.05□□□□□ -0.48
TRIM49-202ENST00000532501 VWDEQ8N2E2 1590 aa12.05□□□□□ -0.48
TRIM49-202ENST00000532501 ABCC3O15438 1527 aa12.04□□□□□ -0.48
TRIM49-202ENST00000532501 SETD5Q9C0A6 1442 aa12.04□□□□□ -0.48
TRIM49-202ENST00000532501 UNC13BO14795 1591 aa12.04□□□□□ -0.48
TRIM49-202ENST00000532501 CEBPAP49715 358 aaPredicted RBP12.03□□□□□ -0.48
TRIM49-202ENST00000532501 PCGF6Q9BYE7 350 aa12.03□□□□□ -0.48
TRIM49-202ENST00000532501 KDM5DQ9BY66 1539 aa12.02□□□□□ -0.49
TRIM49-202ENST00000532501 PZPP20742 1482 aa12.02□□□□□ -0.49
TRIM49-202ENST00000532501 SPDYE1Q8NFV5 336 aaPredicted RBP12.02□□□□□ -0.49
TRIM49-202ENST00000532501 RIMS1Q86UR5 1692 aaKnown RBP12.01□□□□□ -0.49
TRIM49-202ENST00000532501 POTEIP0CG38 1075 aa12□□□□□ -0.49
TRIM49-202ENST00000532501 NUP155O75694 1391 aa12□□□□□ -0.49
TRIM49-202ENST00000532501 PTPRMP28827 1452 aa12□□□□□ -0.49
TRIM49-202ENST00000532501 CLTCQ00610 1675 aaKnown RBP11.99□□□□□ -0.49
TRIM49-202ENST00000532501 FER1L4A9Z1Z3 1794 aa11.99□□□□□ -0.49
TRIM49-202ENST00000532501 CEP152O94986 1710 aa11.99□□□□□ -0.49
TRIM49-202ENST00000532501 NPATQ14207 1427 aa11.98□□□□□ -0.49
TRIM49-202ENST00000532501 LMTK2Q8IWU2 1503 aa11.98□□□□□ -0.49
TRIM49-202ENST00000532501 FBXO31Q5XUX0 539 aaPredicted RBP11.98□□□□□ -0.49
TRIM49-202ENST00000532501 FAM135AQ9P2D6 1515 aa11.98□□□□□ -0.49
TRIM49-202ENST00000532501 WASHC2CQ9Y4E1 1318 aa11.98□□□□□ -0.49
TRIM49-202ENST00000532501 ZMYM3Q14202 1370 aa11.97□□□□□ -0.49
TRIM49-202ENST00000532501 SPDYE2BA6NHP3 402 aa11.97□□□□□ -0.49
TRIM49-202ENST00000532501 SPDYE6P0CI01 402 aa11.97□□□□□ -0.49
TRIM49-202ENST00000532501 SPDYE2Q495Y8 402 aa11.97□□□□□ -0.49
TRIM49-202ENST00000532501 IQGAP3Q86VI3 1631 aa11.97□□□□□ -0.49
TRIM49-202ENST00000532501 EFCAB6Q5THR3 1501 aa11.96□□□□□ -0.49
TRIM49-202ENST00000532501 TRIM52Q96A61 297 aa11.95□□□□□ -0.5
TRIM49-202ENST00000532501 CNTLNQ9NXG0 1405 aa11.95□□□□□ -0.5
TRIM49-202ENST00000532501 CAMSAP1Q5T5Y3 1602 aa11.95□□□□□ -0.5
TRIM49-202ENST00000532501 C3P01024 1663 aa11.95□□□□□ -0.5
TRIM49-202ENST00000532501 KANK1Q14678 1352 aa11.94□□□□□ -0.5
TRIM49-202ENST00000532501 CHADLQ6NUI6 762 aa11.94□□□□□ -0.5
TRIM49-202ENST00000532501 ERVK-7P63135 1459 aa11.93□□□□□ -0.5
TRIM49-202ENST00000532501 PLA2R1Q13018 1463 aa11.93□□□□□ -0.5
TRIM49-202ENST00000532501 ARHGAP31Q2M1Z3 1444 aa11.93□□□□□ -0.5
TRIM49-202ENST00000532501 MROH2AA6NES4 1674 aa11.93□□□□□ -0.5
TRIM49-202ENST00000532501 TET3O43151 1660 aa11.93□□□□□ -0.5
TRIM49-202ENST00000532501 ZC3H13Q5T200 1668 aaKnown RBP11.93□□□□□ -0.5
TRIM49-202ENST00000532501 E9PCH4 1651 aa11.92□□□□□ -0.5
TRIM49-202ENST00000532501 PKD2Q13563 968 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms