RNA–Protein interactions for RNA: ENST00000532463.5

CTNND1-231, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,749 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-231ENST00000532463 CHMP4AQ9BY43 222 aa9.96□□□□□ -0.81
CTNND1-231ENST00000532463 TMX4Q9H1E5 349 aaPredicted RBP9.96□□□□□ -0.81
CTNND1-231ENST00000532463 FOXD4L1Q9NU39 408 aa9.96□□□□□ -0.82
CTNND1-231ENST00000532463 CNKSR2Q8WXI2 1034 aa9.96□□□□□ -0.82
CTNND1-231ENST00000532463 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.96□□□□□ -0.82
CTNND1-231ENST00000532463 TRIM6-TRIM34B2RNG4 842 aa9.95□□□□□ -0.82
CTNND1-231ENST00000532463 HOOK1Q9UJC3 728 aaKnown RBP9.95□□□□□ -0.82
CTNND1-231ENST00000532463 NAP1L1P55209 391 aaKnown RBP9.95□□□□□ -0.82
CTNND1-231ENST00000532463 FAM184AQ8NB25 1140 aa9.95□□□□□ -0.82
CTNND1-231ENST00000532463 GIMAP7Q8NHV1 300 aa9.95□□□□□ -0.82
CTNND1-231ENST00000532463 NOL8Q76FK4 1167 aaKnown RBP9.95□□□□□ -0.82
CTNND1-231ENST00000532463 CARD11Q9BXL7 1154 aa9.95□□□□□ -0.82
CTNND1-231ENST00000532463 LMOD2Q6P5Q4 547 aa9.94□□□□□ -0.82
CTNND1-231ENST00000532463 IFT57Q9NWB7 429 aa9.94□□□□□ -0.82
CTNND1-231ENST00000532463 RTF1Q92541 710 aaKnown RBP9.94□□□□□ -0.82
CTNND1-231ENST00000532463 RRP7BPQ9NSQ0 103 aa9.94□□□□□ -0.82
CTNND1-231ENST00000532463 ANKRD18AQ8IVF6 992 aa9.93□□□□□ -0.82
CTNND1-231ENST00000532463 AKAP17AQ02040 695 aaKnown RBP9.93□□□□□ -0.82
CTNND1-231ENST00000532463 HSP90AB2PQ58FF8 381 aa9.93□□□□□ -0.82
CTNND1-231ENST00000532463 TSHZ2Q9NRE2 1034 aa9.93□□□□□ -0.82
CTNND1-231ENST00000532463 EZRP15311 586 aaKnown RBP9.93□□□□□ -0.82
CTNND1-231ENST00000532463 AXDND1Q5T1B0 1012 aaPredicted RBP9.93□□□□□ -0.82
CTNND1-231ENST00000532463 ITPRIPQ8IWB1 547 aa9.93□□□□□ -0.82
CTNND1-231ENST00000532463 TOMM22Q9NS69 142 aa9.93□□□□□ -0.82
CTNND1-231ENST00000532463 FOXD4L5Q5VV16 416 aaPredicted RBP9.93□□□□□ -0.82
CTNND1-231ENST00000532463 CLASRPQ8N2M8 674 aaKnown RBP9.93□□□□□ -0.82
CTNND1-231ENST00000532463 FOXD4L4Q8WXT5 416 aaPredicted RBP9.93□□□□□ -0.82
CTNND1-231ENST00000532463 CT47B1P0C2W7 299 aaPredicted RBP9.92□□□□□ -0.82
CTNND1-231ENST00000532463 BCCIPQ9P287 314 aaKnown RBP eCLIP9.91□□□□□ -0.821e-6■■■■□ 21.2
CTNND1-231ENST00000532463 TCEAL9Q9UHQ7 104 aa9.91□□□□□ -0.82
CTNND1-231ENST00000532463 R3HCC1Q9Y3T6 440 aaKnown RBP9.91□□□□□ -0.82
CTNND1-231ENST00000532463 CC2D1BQ5T0F9 858 aaKnown RBP9.91□□□□□ -0.82
CTNND1-231ENST00000532463 POGKQ9P215 609 aa9.91□□□□□ -0.82
CTNND1-231ENST00000532463 RGL3Q3MIN7 710 aa9.9□□□□□ -0.82
CTNND1-231ENST00000532463 CPLX2Q6PUV4 134 aaKnown RBP9.9□□□□□ -0.82
CTNND1-231ENST00000532463 SEPT11Q9NVA2 429 aaKnown RBP9.9□□□□□ -0.82
CTNND1-231ENST00000532463 SIN3AQ96ST3 1273 aa9.9□□□□□ -0.82
CTNND1-231ENST00000532463 GOLGA6L10A6NI86 522 aa9.89□□□□□ -0.83
CTNND1-231ENST00000532463 HMGN5P82970 282 aaKnown RBP9.89□□□□□ -0.83
CTNND1-231ENST00000532463 CCDC39Q9UFE4 941 aa9.89□□□□□ -0.83
CTNND1-231ENST00000532463 ERLIN2O94905 339 aa9.89□□□□□ -0.83
CTNND1-231ENST00000532463 OFD1O75665 1012 aa9.89□□□□□ -0.83
CTNND1-231ENST00000532463 SYNE3Q6ZMZ3 975 aa9.88□□□□□ -0.83
CTNND1-231ENST00000532463 RCAN3Q9UKA8 241 aa9.88□□□□□ -0.83
CTNND1-231ENST00000532463 RALBP1Q15311 655 aa9.88□□□□□ -0.83
CTNND1-231ENST00000532463 TRIM29Q14134 588 aa9.88□□□□□ -0.83
CTNND1-231ENST00000532463 SEPT7Q16181 437 aaKnown RBP9.88□□□□□ -0.83
CTNND1-231ENST00000532463 ZFYVE27Q5T4F4 411 aa9.88□□□□□ -0.83
CTNND1-231ENST00000532463 SASS6Q6UVJ0 657 aa9.88□□□□□ -0.83
CTNND1-231ENST00000532463 CCP110O43303 1012 aa9.88□□□□□ -0.83
CTNND1-231ENST00000532463 ANKRD62A6NC57 917 aa9.87□□□□□ -0.83
CTNND1-231ENST00000532463 NF2P35240 595 aa9.87□□□□□ -0.83
CTNND1-231ENST00000532463 MCTP1Q6DN14 999 aa9.87□□□□□ -0.83
CTNND1-231ENST00000532463 CCER2I3L3R5 266 aa9.87□□□□□ -0.83
CTNND1-231ENST00000532463 ENOX2Q16206 610 aaKnown RBP9.87□□□□□ -0.83
CTNND1-231ENST00000532463 RSPH4AQ5TD94 716 aa9.87□□□□□ -0.83
CTNND1-231ENST00000532463 RABEP1Q15276 862 aa9.86□□□□□ -0.83
CTNND1-231ENST00000532463 BICD2Q8TD16 824 aa9.86□□□□□ -0.83
CTNND1-231ENST00000532463 STK31Q9BXU1 1019 aa9.86□□□□□ -0.83
CTNND1-231ENST00000532463 SKIDA1Q1XH10 827 aa9.86□□□□□ -0.83
CTNND1-231ENST00000532463 MTUS2Q5JR59 1369 aa9.86□□□□□ -0.83
CTNND1-231ENST00000532463 CCDC180Q9P1Z9 1646 aa9.86□□□□□ -0.83
CTNND1-231ENST00000532463 G3V3G9 751 aa9.86□□□□□ -0.83
CTNND1-231ENST00000532463 DCAF8Q5TAQ9 597 aa9.86□□□□□ -0.83
CTNND1-231ENST00000532463 EIF3JO75822 258 aaKnown RBP9.85□□□□□ -0.83
CTNND1-231ENST00000532463 CCAR1Q8IX12 1150 aaKnown RBP9.85□□□□□ -0.83
CTNND1-231ENST00000532463 CHMP3Q9Y3E7 222 aa9.85□□□□□ -0.83
CTNND1-231ENST00000532463 SPATA24Q86W54 205 aa9.85□□□□□ -0.83
CTNND1-231ENST00000532463 CLIP1P30622 1438 aa9.84□□□□□ -0.83
CTNND1-231ENST00000532463 TMF1P82094 1093 aa9.84□□□□□ -0.83
CTNND1-231ENST00000532463 NAT10Q9H0A0 1025 aaKnown RBP9.84□□□□□ -0.83
CTNND1-231ENST00000532463 CENPHQ9H3R5 247 aa9.84□□□□□ -0.83
CTNND1-231ENST00000532463 MORC1Q86VD1 984 aa9.84□□□□□ -0.83
CTNND1-231ENST00000532463 CCDC43Q96MW1 224 aaKnown RBP9.83□□□□□ -0.84
CTNND1-231ENST00000532463 ERLIN1O75477 346 aa9.83□□□□□ -0.84
CTNND1-231ENST00000532463 FOXD4L6Q3SYB3 417 aaPredicted RBP9.83□□□□□ -0.84
CTNND1-231ENST00000532463 FOXD4L3Q6VB84 417 aaPredicted RBP9.83□□□□□ -0.84
CTNND1-231ENST00000532463 PAF1Q8N7H5 531 aa9.83□□□□□ -0.84
CTNND1-231ENST00000532463 CCDC73Q6ZRK6 1079 aa9.83□□□□□ -0.84
CTNND1-231ENST00000532463 EPS15P42566 896 aa9.83□□□□□ -0.84
CTNND1-231ENST00000532463 FRAT2O75474 233 aaPredicted RBP9.82□□□□□ -0.84
CTNND1-231ENST00000532463 MRE11P49959 708 aa9.82□□□□□ -0.84
CTNND1-231ENST00000532463 ZNF330Q9Y3S2 320 aaPredicted RBP9.82□□□□□ -0.84
CTNND1-231ENST00000532463 OLFM4Q6UX06 510 aa9.82□□□□□ -0.84
CTNND1-231ENST00000532463 CHMP5Q9NZZ3 219 aa9.82□□□□□ -0.84
CTNND1-231ENST00000532463 AEBP1Q8IUX7 1158 aa9.81□□□□□ -0.84
CTNND1-231ENST00000532463 PDILTQ8N807 584 aa9.81□□□□□ -0.84
CTNND1-231ENST00000532463 PPM1EQ8WY54 764 aa9.81□□□□□ -0.84
CTNND1-231ENST00000532463 LRRFIP1Q32MZ4 808 aaKnown RBP9.81□□□□□ -0.84
CTNND1-231ENST00000532463 RNF20Q5VTR2 975 aa9.81□□□□□ -0.84
CTNND1-231ENST00000532463 SMARCE1Q969G3 411 aa9.81□□□□□ -0.84
CTNND1-231ENST00000532463 CFAP57Q96MR6 1250 aa9.81□□□□□ -0.84
CTNND1-231ENST00000532463 CPLX1O14810 134 aa9.81□□□□□ -0.84
CTNND1-231ENST00000532463 DHX8Q14562 1220 aaKnown RBP9.81□□□□□ -0.84
CTNND1-231ENST00000532463 CEP63Q96MT8 703 aa9.81□□□□□ -0.84
CTNND1-231ENST00000532463 CTDP1Q9Y5B0 961 aaPredicted RBP9.81□□□□□ -0.84
CTNND1-231ENST00000532463 FAM161AQ3B820 660 aa9.8□□□□□ -0.84
CTNND1-231ENST00000532463 CAVIN1Q6NZI2 390 aaKnown RBP9.8□□□□□ -0.84
CTNND1-231ENST00000532463 PRKCSHP14314 528 aaPredicted RBP9.8□□□□□ -0.84
CTNND1-231ENST00000532463 TAX1BP1Q86VP1 789 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms