RNA–Protein interactions for RNA: ENST00000532445.1

NCAPD3-209, Transcript of non-SMC condensin II complex subunit D3, humanhuman

APPRIS ALT2 TSL 3

Gene NCAPD3, Length 532 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3-209ENST00000532445 PTPRKQ15262 1439 aa36.25■■■■□ 3.39
NCAPD3-209ENST00000532445 ZC3H13Q5T200 1668 aaKnown RBP36.24■■■■□ 3.39
NCAPD3-209ENST00000532445 DNMT1P26358 1616 aaKnown RBP36.23■■■■□ 3.39
NCAPD3-209ENST00000532445 DMRT2Q9Y5R5 561 aa36.22■■■■□ 3.39
NCAPD3-209ENST00000532445 CEP170BQ9Y4F5 1589 aaPredicted RBP36.22■■■■□ 3.39
NCAPD3-209ENST00000532445 SHANK2Q9UPX8 1470 aa36.21■■■■□ 3.39
NCAPD3-209ENST00000532445 CAMSAP1Q5T5Y3 1602 aa36.2■■■■□ 3.39
NCAPD3-209ENST00000532445 FGD6Q6ZV73 1430 aa36.2■■■■□ 3.39
NCAPD3-209ENST00000532445 DUOX2Q9NRD8 1548 aa36.18■■■■□ 3.38
NCAPD3-209ENST00000532445 TCOF1Q13428 1488 aaKnown RBP36.17■■■■□ 3.38
NCAPD3-209ENST00000532445 NCOA1Q15788 1441 aa36.15■■■■□ 3.38
NCAPD3-209ENST00000532445 PZPP20742 1482 aa36.14■■■■□ 3.38
NCAPD3-209ENST00000532445 WASHC2CQ9Y4E1 1318 aa36.13■■■■□ 3.37
NCAPD3-209ENST00000532445 FBXO41Q8TF61 875 aa36.13■■■■□ 3.37
NCAPD3-209ENST00000532445 CEP152O94986 1710 aa36.11■■■■□ 3.37
NCAPD3-209ENST00000532445 PTPRTO14522 1441 aa36.11■■■■□ 3.37
NCAPD3-209ENST00000532445 DAPK1P53355 1430 aa36.11■■■■□ 3.37
NCAPD3-209ENST00000532445 ABCC5O15440 1437 aa36.1■■■■□ 3.37
NCAPD3-209ENST00000532445 MROH1Q8NDA8 1641 aa36.08■■■■□ 3.37
NCAPD3-209ENST00000532445 ABCC3O15438 1527 aa36.06■■■■□ 3.36
NCAPD3-209ENST00000532445 A2ML1A8K2U0 1454 aa36.05■■■■□ 3.36
NCAPD3-209ENST00000532445 PLA2R1Q13018 1463 aa36.05■■■■□ 3.36
NCAPD3-209ENST00000532445 KIF15Q9NS87 1388 aa36.04■■■■□ 3.36
NCAPD3-209ENST00000532445 TNRQ92752 1358 aa36.03■■■■□ 3.36
NCAPD3-209ENST00000532445 ERBINQ96RT1 1412 aa36.03■■■■□ 3.36
NCAPD3-209ENST00000532445 POLR1AO95602 1720 aaPredicted RBP36.02■■■■□ 3.36
NCAPD3-209ENST00000532445 PRDM15P57071 1507 aaPredicted RBP36■■■■□ 3.35
NCAPD3-209ENST00000532445 CERKQ8TCT0 537 aa35.99■■■■□ 3.35
NCAPD3-209ENST00000532445 DEPDC5O75140 1603 aa35.98■■■■□ 3.35
NCAPD3-209ENST00000532445 FBXO31Q5XUX0 539 aaPredicted RBP35.96■■■■□ 3.35
NCAPD3-209ENST00000532445 CFAP65Q6ZU64 1925 aaKnown RBP35.96■■■■□ 3.35
NCAPD3-209ENST00000532445 ANKRD30AQ9BXX3 1397 aa35.94■■■■□ 3.34
NCAPD3-209ENST00000532445 RRP7BPQ9NSQ0 103 aa35.94■■■■□ 3.34
NCAPD3-209ENST00000532445 NLRP1Q9C000 1473 aa35.93■■■■□ 3.34
NCAPD3-209ENST00000532445 SPATA31D1Q6ZQQ2 1576 aa35.93■■■■□ 3.34
NCAPD3-209ENST00000532445 PKD2Q13563 968 aa35.91■■■■□ 3.34
NCAPD3-209ENST00000532445 NCKAP5LQ9HCH0 1330 aa35.89■■■■□ 3.34
NCAPD3-209ENST00000532445 FAM50AQ14320 339 aaKnown RBP35.89■■■■□ 3.34
NCAPD3-209ENST00000532445 UGGT1Q9NYU2 1555 aa35.87■■■■□ 3.33
NCAPD3-209ENST00000532445 CHIC2Q9UKJ5 165 aa35.87■■■■□ 3.33
NCAPD3-209ENST00000532445 ADGRL2O95490 1459 aa35.86■■■■□ 3.33
NCAPD3-209ENST00000532445 ERVK-7P63135 1459 aa35.86■■■■□ 3.33
NCAPD3-209ENST00000532445 LTBP4Q8N2S1 1624 aa35.84■■■■□ 3.33
NCAPD3-209ENST00000532445 KANK1Q14678 1352 aa35.82■■■■□ 3.32
NCAPD3-209ENST00000532445 NEURL4Q96JN8 1562 aa35.78■■■■□ 3.32
NCAPD3-209ENST00000532445 ARHGAP31Q2M1Z3 1444 aa35.76■■■■□ 3.32
NCAPD3-209ENST00000532445 GRWD1Q9BQ67 446 aaKnown RBP eCLIP35.76■■■■□ 3.32
NCAPD3-209ENST00000532445 UBR1Q8IWV7 1749 aa35.76■■■■□ 3.31
NCAPD3-209ENST00000532445 IQSEC2Q5JU85 1478 aa35.74■■■■□ 3.31
NCAPD3-209ENST00000532445 VWDEQ8N2E2 1590 aa35.74■■■■□ 3.31
NCAPD3-209ENST00000532445 THEMISQ8N1K5 641 aaPredicted RBP35.74■■■■□ 3.31
NCAPD3-209ENST00000532445 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP35.73■■■■□ 3.31
NCAPD3-209ENST00000532445 LMTK2Q8IWU2 1503 aa35.72■■■■□ 3.31
NCAPD3-209ENST00000532445 IQGAP1P46940 1657 aa35.68■■■■□ 3.3
NCAPD3-209ENST00000532445 ZNF335Q9H4Z2 1342 aaPredicted RBP35.67■■■■□ 3.3
NCAPD3-209ENST00000532445 ANKLE2Q86XL3 938 aa35.67■■■■□ 3.3
NCAPD3-209ENST00000532445 EFCAB6Q5THR3 1501 aa35.67■■■■□ 3.3
NCAPD3-209ENST00000532445 ANKRD50Q9ULJ7 1429 aa35.66■■■■□ 3.3
NCAPD3-209ENST00000532445 PIK3C2BO00750 1634 aa35.64■■■■□ 3.3
NCAPD3-209ENST00000532445 UNC13BO14795 1591 aa35.61■■■■□ 3.29
NCAPD3-209ENST00000532445 KDM5AP29375 1690 aaKnown RBP35.61■■■■□ 3.29
NCAPD3-209ENST00000532445 GCC2Q8IWJ2 1684 aa35.61■■■■□ 3.29
NCAPD3-209ENST00000532445 MED14O60244 1454 aa35.6■■■■□ 3.29
NCAPD3-209ENST00000532445 TET3O43151 1660 aa35.6■■■■□ 3.29
NCAPD3-209ENST00000532445 NPHP4O75161 1426 aaPredicted RBP35.59■■■■□ 3.29
NCAPD3-209ENST00000532445 PPARGC1BQ86YN6 1023 aaKnown RBP35.57■■■■□ 3.28
NCAPD3-209ENST00000532445 ROCK1Q13464 1354 aa35.56■■■■□ 3.28
NCAPD3-209ENST00000532445 SYNMO15061 1565 aa35.55■■■■□ 3.28
NCAPD3-209ENST00000532445 CPS1P31327 1500 aa35.54■■■■□ 3.28
NCAPD3-209ENST00000532445 SLIT1O75093 1534 aa35.52■■■■□ 3.28
NCAPD3-209ENST00000532445 RPRD2Q5VT52 1461 aaKnown RBP35.51■■■■□ 3.28
NCAPD3-209ENST00000532445 SCAF11Q99590 1463 aaKnown RBP35.5■■■■□ 3.27
NCAPD3-209ENST00000532445 ARHGAP23Q9P227 1491 aa35.48■■■■□ 3.27
NCAPD3-209ENST00000532445 IQGAP3Q86VI3 1631 aa35.47■■■■□ 3.27
NCAPD3-209ENST00000532445 ITGAEP38570 1179 aa35.46■■■■□ 3.27
NCAPD3-209ENST00000532445 STAG3Q9UJ98 1225 aa35.46■■■■□ 3.27
NCAPD3-209ENST00000532445 NOS1P29475 1434 aa35.45■■■■□ 3.27
NCAPD3-209ENST00000532445 ADGRB3O60242 1522 aa35.44■■■■□ 3.26
NCAPD3-209ENST00000532445 E9PCH4 1651 aa35.43■■■■□ 3.26
NCAPD3-209ENST00000532445 MYO5BQ9ULV0 1848 aa35.41■■■■□ 3.26
NCAPD3-209ENST00000532445 STRCP1A6NGW2 1772 aa35.4■■■■□ 3.26
NCAPD3-209ENST00000532445 EID1Q9Y6B2 187 aa35.39■■■■□ 3.26
NCAPD3-209ENST00000532445 RRBP1Q9P2E9 1410 aaKnown RBP35.38■■■■□ 3.25
NCAPD3-209ENST00000532445 TMEM2Q9UHN6 1383 aa35.37■■■■□ 3.25
NCAPD3-209ENST00000532445 TXNDC2Q86VQ3 553 aa35.36■■■■□ 3.25
NCAPD3-209ENST00000532445 IDI1Q13907 227 aa35.35■■■■□ 3.25
NCAPD3-209ENST00000532445 UBAP1LF5GYI3 381 aa35.34■■■■□ 3.25
NCAPD3-209ENST00000532445 SLC52A1Q9NWF4 448 aa35.33■■■■□ 3.25
NCAPD3-209ENST00000532445 LTKP29376 864 aa35.3■■■■□ 3.24
NCAPD3-209ENST00000532445 NUP155O75694 1391 aa35.26■■■■□ 3.24
NCAPD3-209ENST00000532445 TMEM131LA2VDJ0 1609 aa35.26■■■■□ 3.24
NCAPD3-209ENST00000532445 SPHKAPQ2M3C7 1700 aa35.23■■■■□ 3.23
NCAPD3-209ENST00000532445 LRRC7Q96NW7 1537 aa35.21■■■■□ 3.23
NCAPD3-209ENST00000532445 TOM1O60784 492 aa35.18■■■■□ 3.22
NCAPD3-209ENST00000532445 XIRP1Q702N8 1843 aaKnown RBP35.18■■■■□ 3.22
NCAPD3-209ENST00000532445 SCAF1Q9H7N4 1312 aaKnown RBP35.15■■■■□ 3.22
NCAPD3-209ENST00000532445 ZFYVE9O95405 1425 aa35.12■■■■□ 3.21
NCAPD3-209ENST00000532445 NAIPQ13075 1403 aa35.12■■■■□ 3.21
NCAPD3-209ENST00000532445 RIMS2Q9UQ26 1411 aa35.11■■■■□ 3.21
NCAPD3-209ENST00000532445 CHGAP10645 457 aaKnown RBP35.09■■■■□ 3.21
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms