RNA–Protein interactions for RNA: ENST00000532289.1

PTP4A2-214, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 3

Gene PTP4A2, Length 610 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-214ENST00000532289 MED14O60244 1454 aa32.23■■■□□ 2.75
PTP4A2-214ENST00000532289 STRCP1A6NGW2 1772 aa32.21■■■□□ 2.75
PTP4A2-214ENST00000532289 DEPDC5O75140 1603 aa32.21■■■□□ 2.75
PTP4A2-214ENST00000532289 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.2■■■□□ 2.751e-9■■□□□ 12.2
PTP4A2-214ENST00000532289 CASKIN1Q8WXD9 1431 aa32.2■■■□□ 2.75
PTP4A2-214ENST00000532289 RNF17Q9BXT8 1623 aaKnown RBP32.19■■■□□ 2.74
PTP4A2-214ENST00000532289 NPHP4O75161 1426 aaPredicted RBP32.19■■■□□ 2.74
PTP4A2-214ENST00000532289 FBXO31Q5XUX0 539 aaPredicted RBP32.19■■■□□ 2.74
PTP4A2-214ENST00000532289 EHMT2Q96KQ7 1210 aa32.19■■■□□ 2.74
PTP4A2-214ENST00000532289 LRRC7Q96NW7 1537 aa32.19■■■□□ 2.74
PTP4A2-214ENST00000532289 PLEKHH2Q8IVE3 1493 aa32.18■■■□□ 2.74
PTP4A2-214ENST00000532289 THEMISQ8N1K5 641 aaPredicted RBP32.15■■■□□ 2.74
PTP4A2-214ENST00000532289 IQGAP1P46940 1657 aa32.15■■■□□ 2.74
PTP4A2-214ENST00000532289 PZPP20742 1482 aa32.14■■■□□ 2.74
PTP4A2-214ENST00000532289 SYNMO15061 1565 aa32.13■■■□□ 2.73
PTP4A2-214ENST00000532289 UGGT1Q9NYU2 1555 aa32.09■■■□□ 2.73
PTP4A2-214ENST00000532289 POTEAQ6S8J7 498 aa32.08■■■□□ 2.73
PTP4A2-214ENST00000532289 CFDP1Q9UEE9 299 aaPredicted RBP32.08■■■□□ 2.73
PTP4A2-214ENST00000532289 NLRP1Q9C000 1473 aa32.08■■■□□ 2.73
PTP4A2-214ENST00000532289 FAM135AQ9P2D6 1515 aa32.06■■■□□ 2.72
PTP4A2-214ENST00000532289 MIA2Q96PC5 1412 aa32.05■■■□□ 2.72
PTP4A2-214ENST00000532289 KDM5DQ9BY66 1539 aa32.05■■■□□ 2.72
PTP4A2-214ENST00000532289 DHX29Q7Z478 1369 aaKnown RBP32.04■■■□□ 2.72
PTP4A2-214ENST00000532289 RTEL1-TNFRSF6BF6WH68 1400 aa32■■■□□ 2.71
PTP4A2-214ENST00000532289 FYCO1Q9BQS8 1478 aa31.98■■■□□ 2.71
PTP4A2-214ENST00000532289 CCNB3Q8WWL7 1395 aa31.97■■■□□ 2.71
PTP4A2-214ENST00000532289 KIF3BO15066 747 aa31.96■■■□□ 2.71
PTP4A2-214ENST00000532289 MBD5Q9P267 1494 aa31.96■■■□□ 2.71
PTP4A2-214ENST00000532289 ZC3H13Q5T200 1668 aaKnown RBP31.95■■■□□ 2.71
PTP4A2-214ENST00000532289 XIRP1Q702N8 1843 aaKnown RBP31.95■■■□□ 2.7
PTP4A2-214ENST00000532289 WASHC2CQ9Y4E1 1318 aa31.95■■■□□ 2.7
PTP4A2-214ENST00000532289 SETD1AO15047 1707 aaKnown RBP31.93■■■□□ 2.7
PTP4A2-214ENST00000532289 ZNF644Q9H582 1327 aaPredicted RBP31.92■■■□□ 2.7
PTP4A2-214ENST00000532289 FAM135BQ49AJ0 1406 aa31.89■■■□□ 2.7
PTP4A2-214ENST00000532289 TIAM1Q13009 1591 aa31.81■■■□□ 2.68
PTP4A2-214ENST00000532289 UBR1Q8IWV7 1749 aa31.78■■■□□ 2.68
PTP4A2-214ENST00000532289 SCAF11Q99590 1463 aaKnown RBP31.76■■■□□ 2.67
PTP4A2-214ENST00000532289 ROBO1Q9Y6N7 1651 aa31.74■■■□□ 2.67
PTP4A2-214ENST00000532289 MTUS2Q5JR59 1369 aa31.73■■■□□ 2.67
PTP4A2-214ENST00000532289 ERVK-7P63135 1459 aa31.72■■■□□ 2.67
PTP4A2-214ENST00000532289 CCDC141Q6ZP82 1450 aa31.72■■■□□ 2.67
PTP4A2-214ENST00000532289 LTKP29376 864 aa31.7■■■□□ 2.67
PTP4A2-214ENST00000532289 ABCC3O15438 1527 aa31.7■■■□□ 2.66
PTP4A2-214ENST00000532289 UPF1Q92900 1129 aaKnown RBP eCLIP31.69■■■□□ 2.667e-10■□□□□ 8.5
PTP4A2-214ENST00000532289 NCOA2Q15596 1464 aa31.69■■■□□ 2.66
PTP4A2-214ENST00000532289 ARHGAP23Q9P227 1491 aa31.69■■■□□ 2.66
PTP4A2-214ENST00000532289 SLIT1O75093 1534 aa31.67■■■□□ 2.66
PTP4A2-214ENST00000532289 TXNDC2Q86VQ3 553 aa31.65■■■□□ 2.66
PTP4A2-214ENST00000532289 CFAP65Q6ZU64 1925 aaKnown RBP31.64■■■□□ 2.66
PTP4A2-214ENST00000532289 RSPH4AQ5TD94 716 aa31.63■■■□□ 2.65
PTP4A2-214ENST00000532289 TMEM94Q12767 1356 aa31.63■■■□□ 2.65
PTP4A2-214ENST00000532289 MAP3K1Q13233 1512 aa31.59■■■□□ 2.65
PTP4A2-214ENST00000532289 EHBP1L1Q8N3D4 1523 aa31.59■■■□□ 2.65
PTP4A2-214ENST00000532289 CAMSAP2Q08AD1 1489 aa31.59■■■□□ 2.65
PTP4A2-214ENST00000532289 LRRC9Q6ZRR7 1453 aa31.59■■■□□ 2.65
PTP4A2-214ENST00000532289 CEP162Q5TB80 1403 aa31.58■■■□□ 2.65
PTP4A2-214ENST00000532289 CHIC1Q5VXU3 224 aa31.57■■■□□ 2.64
PTP4A2-214ENST00000532289 PHLPP1O60346 1717 aa31.57■■■□□ 2.64
PTP4A2-214ENST00000532289 JCADQ9P266 1359 aa31.56■■■□□ 2.64
PTP4A2-214ENST00000532289 EID1Q9Y6B2 187 aa31.54■■■□□ 2.64
PTP4A2-214ENST00000532289 CEP152O94986 1710 aa31.53■■■□□ 2.64
PTP4A2-214ENST00000532289 MROH1Q8NDA8 1641 aa31.53■■■□□ 2.64
PTP4A2-214ENST00000532289 ARHGEF5Q12774 1597 aa31.52■■■□□ 2.64
PTP4A2-214ENST00000532289 KCNA6P17658 529 aa31.51■■■□□ 2.63
PTP4A2-214ENST00000532289 SRCAPQ6ZRS2 3230 aa31.51■■■□□ 2.63
PTP4A2-214ENST00000532289 EIF2AK4Q9P2K8 1649 aaKnown RBP31.5■■■□□ 2.63
PTP4A2-214ENST00000532289 TSPY4P0CV99 314 aa31.48■■■□□ 2.63
PTP4A2-214ENST00000532289 TSPY10P0CW01 314 aa31.48■■■□□ 2.63
PTP4A2-214ENST00000532289 PROSER2Q86WR7 435 aaPredicted RBP31.48■■■□□ 2.63
PTP4A2-214ENST00000532289 RBM33Q96EV2 1170 aaKnown RBP31.48■■■□□ 2.63
PTP4A2-214ENST00000532289 TRIM52Q96A61 297 aa31.47■■■□□ 2.63
PTP4A2-214ENST00000532289 PRDM15P57071 1507 aaPredicted RBP31.46■■■□□ 2.63
PTP4A2-214ENST00000532289 LRP6O75581 1613 aa31.46■■■□□ 2.63
PTP4A2-214ENST00000532289 TMEM2Q9UHN6 1383 aa31.45■■■□□ 2.63
PTP4A2-214ENST00000532289 ZNF772Q68DY9 489 aaPredicted RBP31.45■■■□□ 2.63
PTP4A2-214ENST00000532289 PIK3C2BO00750 1634 aa31.44■■■□□ 2.62
PTP4A2-214ENST00000532289 COL16A1Q07092 1604 aaPredicted RBP31.44■■■□□ 2.62
PTP4A2-214ENST00000532289 SLAIN2Q9P270 581 aa31.43■■■□□ 2.62
PTP4A2-214ENST00000532289 TET3O43151 1660 aa31.42■■■□□ 2.62
PTP4A2-214ENST00000532289 NKTRP30414 1462 aaKnown RBP31.4■■■□□ 2.62
PTP4A2-214ENST00000532289 MAST1Q9Y2H9 1570 aa31.4■■■□□ 2.62
PTP4A2-214ENST00000532289 MSH6P52701 1360 aa31.4■■■□□ 2.62
PTP4A2-214ENST00000532289 ARHGAP31Q2M1Z3 1444 aa31.4■■■□□ 2.62
PTP4A2-214ENST00000532289 NWD1Q149M9 1564 aa31.39■■■□□ 2.62
PTP4A2-214ENST00000532289 SPATA31A6Q5VVP1 1343 aa31.39■■■□□ 2.62
PTP4A2-214ENST00000532289 SLC26A8Q96RN1 970 aa31.37■■■□□ 2.61
PTP4A2-214ENST00000532289 KDM5AP29375 1690 aaKnown RBP31.37■■■□□ 2.61
PTP4A2-214ENST00000532289 FGD6Q6ZV73 1430 aa31.35■■■□□ 2.61
PTP4A2-214ENST00000532289 MEX3CQ5U5Q3 659 aaKnown RBP31.35■■■□□ 2.61
PTP4A2-214ENST00000532289 RXRBP28702 533 aa31.34■■■□□ 2.61
PTP4A2-214ENST00000532289 CDK12Q9NYV4 1490 aaPredicted RBP31.33■■■□□ 2.61
PTP4A2-214ENST00000532289 EFCAB6Q5THR3 1501 aa31.32■■■□□ 2.6
PTP4A2-214ENST00000532289 SHPRHQ149N8 1683 aa31.29■■■□□ 2.6
PTP4A2-214ENST00000532289 STAG3Q9UJ98 1225 aa31.29■■■□□ 2.6
PTP4A2-214ENST00000532289 DUOX2Q9NRD8 1548 aa31.24■■■□□ 2.59
PTP4A2-214ENST00000532289 IDI1Q13907 227 aa31.22■■■□□ 2.59
PTP4A2-214ENST00000532289 AHDC1Q5TGY3 1603 aaPredicted RBP31.22■■■□□ 2.59
PTP4A2-214ENST00000532289 CHD2O14647 1828 aaKnown RBP31.21■■■□□ 2.59
PTP4A2-214ENST00000532289 NCOA3Q9Y6Q9 1424 aa31.14■■■□□ 2.58
PTP4A2-214ENST00000532289 DIP2AQ14689 1571 aa31.13■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms