RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 RAPGEF3O95398 923 aa18.97■□□□□ 0.63
COPB1-208ENST00000532088 AFAP1Q8N556 730 aa18.97■□□□□ 0.63
COPB1-208ENST00000532088 HECW2Q9P2P5 1572 aa18.97■□□□□ 0.63
COPB1-208ENST00000532088 INO80Q9ULG1 1556 aaPredicted RBP18.97■□□□□ 0.63
COPB1-208ENST00000532088 SPAG9O60271 1321 aaKnown RBP18.96■□□□□ 0.63
COPB1-208ENST00000532088 ADGRL2O95490 1459 aa18.96■□□□□ 0.63
COPB1-208ENST00000532088 ZFYVE16Q7Z3T8 1539 aa18.95■□□□□ 0.62
COPB1-208ENST00000532088 C9orf84Q5VXU9 1444 aa18.95■□□□□ 0.62
COPB1-208ENST00000532088 TRIM26Q12899 539 aaPredicted RBP18.95■□□□□ 0.62
COPB1-208ENST00000532088 ZNF692Q9BU19 519 aaPredicted RBP18.95■□□□□ 0.62
COPB1-208ENST00000532088 ROCK1Q13464 1354 aa18.94■□□□□ 0.62
COPB1-208ENST00000532088 ATP7AQ04656 1500 aa18.94■□□□□ 0.62
COPB1-208ENST00000532088 PLXNC1O60486 1568 aa18.93■□□□□ 0.62
COPB1-208ENST00000532088 PTPRKQ15262 1439 aa18.92■□□□□ 0.62
COPB1-208ENST00000532088 ADGBQ8N7X0 1667 aa18.92■□□□□ 0.62
COPB1-208ENST00000532088 KIDINS220Q9ULH0 1771 aa18.91■□□□□ 0.62
COPB1-208ENST00000532088 PROM2Q8N271 834 aa18.91■□□□□ 0.62
COPB1-208ENST00000532088 SSUH2Q9Y2M2 353 aa18.91■□□□□ 0.62
COPB1-208ENST00000532088 ANKRD30AQ9BXX3 1397 aa18.9■□□□□ 0.62
COPB1-208ENST00000532088 NCOA1Q15788 1441 aa18.89■□□□□ 0.61
COPB1-208ENST00000532088 ARHGEF40Q8TER5 1519 aa18.89■□□□□ 0.61
COPB1-208ENST00000532088 RBM42Q9BTD8 480 aaKnown RBP18.88■□□□□ 0.61
COPB1-208ENST00000532088 REREQ9P2R6 1566 aa18.87■□□□□ 0.61
COPB1-208ENST00000532088 DIP2CQ9Y2E4 1556 aa18.86■□□□□ 0.61
COPB1-208ENST00000532088 ABCA6Q8N139 1617 aa18.85■□□□□ 0.61
COPB1-208ENST00000532088 DUOX2Q9NRD8 1548 aa18.84■□□□□ 0.61
COPB1-208ENST00000532088 ATP10AO60312 1499 aa18.84■□□□□ 0.61
COPB1-208ENST00000532088 YEATS2Q9ULM3 1422 aa18.84■□□□□ 0.61
COPB1-208ENST00000532088 ITGAEP38570 1179 aa18.84■□□□□ 0.61
COPB1-208ENST00000532088 HFM1A2PYH4 1435 aa18.83■□□□□ 0.61
COPB1-208ENST00000532088 KIF15Q9NS87 1388 aa18.83■□□□□ 0.61
COPB1-208ENST00000532088 CHIC2Q9UKJ5 165 aa18.83■□□□□ 0.6
COPB1-208ENST00000532088 MYT1LQ9UL68 1186 aa18.83■□□□□ 0.6
COPB1-208ENST00000532088 A2MP01023 1474 aa18.82■□□□□ 0.6
COPB1-208ENST00000532088 ERBINQ96RT1 1412 aa18.82■□□□□ 0.6
COPB1-208ENST00000532088 DHX29Q7Z478 1369 aaKnown RBP18.81■□□□□ 0.6
COPB1-208ENST00000532088 GCC2Q8IWJ2 1684 aa18.8■□□□□ 0.6
COPB1-208ENST00000532088 AGLP35573 1532 aa18.79■□□□□ 0.6
COPB1-208ENST00000532088 NAIPQ13075 1403 aa18.79■□□□□ 0.6
COPB1-208ENST00000532088 EIF2AK4Q9P2K8 1649 aaKnown RBP18.78■□□□□ 0.6
COPB1-208ENST00000532088 BCORL1Q5H9F3 1711 aa18.78■□□□□ 0.6
COPB1-208ENST00000532088 RRP7BPQ9NSQ0 103 aa18.78■□□□□ 0.6
COPB1-208ENST00000532088 ACIN1Q9UKV3 1341 aaKnown RBP18.77■□□□□ 0.6
COPB1-208ENST00000532088 ANKRD50Q9ULJ7 1429 aa18.77■□□□□ 0.6
COPB1-208ENST00000532088 SETD5Q9C0A6 1442 aa18.74■□□□□ 0.59
COPB1-208ENST00000532088 HRCP23327 699 aa18.72■□□□□ 0.59
COPB1-208ENST00000532088 AKT1S1Q96B36 256 aa18.7■□□□□ 0.58
COPB1-208ENST00000532088 RNF17Q9BXT8 1623 aaKnown RBP18.7■□□□□ 0.58
COPB1-208ENST00000532088 DEPDC5O75140 1603 aa18.69■□□□□ 0.58
COPB1-208ENST00000532088 FAM135AQ9P2D6 1515 aa18.69■□□□□ 0.58
COPB1-208ENST00000532088 SIGLEC1Q9BZZ2 1709 aa18.67■□□□□ 0.58
COPB1-208ENST00000532088 UNC13BO14795 1591 aa18.67■□□□□ 0.58
COPB1-208ENST00000532088 PRDM15P57071 1507 aaPredicted RBP18.66■□□□□ 0.58
COPB1-208ENST00000532088 PCGF6Q9BYE7 350 aa18.66■□□□□ 0.58
COPB1-208ENST00000532088 RAB3GAP2Q9H2M9 1393 aa18.66■□□□□ 0.58
COPB1-208ENST00000532088 KIF3BO15066 747 aa18.65■□□□□ 0.58
COPB1-208ENST00000532088 KDM5DQ9BY66 1539 aa18.64■□□□□ 0.57
COPB1-208ENST00000532088 MROH1Q8NDA8 1641 aa18.63■□□□□ 0.57
COPB1-208ENST00000532088 VWDEQ8N2E2 1590 aa18.62■□□□□ 0.57
COPB1-208ENST00000532088 ARID4BQ4LE39 1312 aaPredicted RBP18.6■□□□□ 0.57
COPB1-208ENST00000532088 ZC3H13Q5T200 1668 aaKnown RBP18.6■□□□□ 0.57
COPB1-208ENST00000532088 LMTK2Q8IWU2 1503 aa18.59■□□□□ 0.57
COPB1-208ENST00000532088 KANK1Q14678 1352 aa18.59■□□□□ 0.57
COPB1-208ENST00000532088 FBXO3Q9UK99 471 aa18.59■□□□□ 0.57
COPB1-208ENST00000532088 IQGAP3Q86VI3 1631 aa18.58■□□□□ 0.56
COPB1-208ENST00000532088 GGT6Q6P531 493 aa18.57■□□□□ 0.56
COPB1-208ENST00000532088 CNTLNQ9NXG0 1405 aa18.57■□□□□ 0.56
COPB1-208ENST00000532088 NUP155O75694 1391 aa18.55■□□□□ 0.56
COPB1-208ENST00000532088 ABCC3O15438 1527 aa18.54■□□□□ 0.56
COPB1-208ENST00000532088 ADAMTSL3P82987 1691 aa18.54■□□□□ 0.56
COPB1-208ENST00000532088 MROH2AA6NES4 1674 aa18.52■□□□□ 0.56
COPB1-208ENST00000532088 PZPP20742 1482 aa18.52■□□□□ 0.55
COPB1-208ENST00000532088 WASHC2CQ9Y4E1 1318 aa18.51■□□□□ 0.55
COPB1-208ENST00000532088 TET3O43151 1660 aa18.51■□□□□ 0.55
COPB1-208ENST00000532088 ARHGAP31Q2M1Z3 1444 aa18.51■□□□□ 0.55
COPB1-208ENST00000532088 REM2Q8IYK8 340 aaPredicted RBP18.51■□□□□ 0.55
COPB1-208ENST00000532088 TRIM52Q96A61 297 aa18.51■□□□□ 0.55
COPB1-208ENST00000532088 MLECQ14165 292 aa18.5■□□□□ 0.55
COPB1-208ENST00000532088 FER1L4A9Z1Z3 1794 aa18.5■□□□□ 0.55
COPB1-208ENST00000532088 ESF1Q9H501 851 aaKnown RBP18.49■□□□□ 0.55
COPB1-208ENST00000532088 RPRD2Q5VT52 1461 aaKnown RBP18.49■□□□□ 0.55
COPB1-208ENST00000532088 CEP152O94986 1710 aa18.49■□□□□ 0.55
COPB1-208ENST00000532088 EFCAB6Q5THR3 1501 aa18.49■□□□□ 0.55
COPB1-208ENST00000532088 CAMSAP1Q5T5Y3 1602 aa18.48■□□□□ 0.55
COPB1-208ENST00000532088 CLTCQ00610 1675 aaKnown RBP18.47■□□□□ 0.55
COPB1-208ENST00000532088 MPHOSPH9Q99550 1183 aa18.47■□□□□ 0.55
COPB1-208ENST00000532088 MADDQ8WXG6 1647 aa18.47■□□□□ 0.55
COPB1-208ENST00000532088 STAG3Q9UJ98 1225 aa18.45■□□□□ 0.54
COPB1-208ENST00000532088 ZMYM3Q14202 1370 aa18.44■□□□□ 0.54
COPB1-208ENST00000532088 NPATQ14207 1427 aa18.43■□□□□ 0.54
COPB1-208ENST00000532088 E9PCH4 1651 aa18.42■□□□□ 0.54
COPB1-208ENST00000532088 DHX57Q6P158 1386 aaKnown RBP18.42■□□□□ 0.54
COPB1-208ENST00000532088 RIMS1Q86UR5 1692 aaKnown RBP18.41■□□□□ 0.54
COPB1-208ENST00000532088 SPDYE1Q8NFV5 336 aaPredicted RBP18.41■□□□□ 0.54
COPB1-208ENST00000532088 PKD2Q13563 968 aa18.4■□□□□ 0.54
COPB1-208ENST00000532088 C3P01024 1663 aa18.39■□□□□ 0.53
COPB1-208ENST00000532088 PTPRTO14522 1441 aa18.39■□□□□ 0.53
COPB1-208ENST00000532088 SPATA31D1Q6ZQQ2 1576 aa18.38■□□□□ 0.53
COPB1-208ENST00000532088 NOS1P29475 1434 aa18.38■□□□□ 0.53
COPB1-208ENST00000532088 PTPRMP28827 1452 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms