RNA–Protein interactions for RNA: ENST00000532066.1

TRIM44-202, Transcript of tripartite motif containing 44, humanhuman

TSL 4

Gene TRIM44, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM44-202ENST00000532066 RTN4Q9NQC3 1192 aaKnown RBP11.3□□□□□ -0.6
TRIM44-202ENST00000532066 PLCH2O75038 1416 aa11.29□□□□□ -0.6
TRIM44-202ENST00000532066 ANKRD50Q9ULJ7 1429 aa11.29□□□□□ -0.6
TRIM44-202ENST00000532066 MBD5Q9P267 1494 aa11.29□□□□□ -0.6
TRIM44-202ENST00000532066 ARHGAP5Q13017 1502 aa11.29□□□□□ -0.6
TRIM44-202ENST00000532066 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.29□□□□□ -0.6
TRIM44-202ENST00000532066 ZCCHC11Q5TAX3 1644 aaKnown RBP11.28□□□□□ -0.6
TRIM44-202ENST00000532066 ARAP3Q8WWN8 1544 aa11.28□□□□□ -0.6
TRIM44-202ENST00000532066 NPM1P06748 294 aaKnown RBP eCLIP11.27□□□□□ -0.61
TRIM44-202ENST00000532066 HNRNPMP52272 730 aaKnown RBP eCLIP11.27□□□□□ -0.611e-7■■■■□ 26
TRIM44-202ENST00000532066 MAST1Q9Y2H9 1570 aa11.26□□□□□ -0.61
TRIM44-202ENST00000532066 CD44P16070 742 aaKnown RBP11.26□□□□□ -0.61
TRIM44-202ENST00000532066 KCNH8Q96L42 1107 aa11.26□□□□□ -0.61
TRIM44-202ENST00000532066 KDM6BO15054 1643 aa11.26□□□□□ -0.61
TRIM44-202ENST00000532066 KIF15Q9NS87 1388 aa11.26□□□□□ -0.61
TRIM44-202ENST00000532066 MYO5CQ9NQX4 1742 aa11.26□□□□□ -0.61
TRIM44-202ENST00000532066 SAMD9LQ8IVG5 1584 aa11.25□□□□□ -0.61
TRIM44-202ENST00000532066 STAG3Q9UJ98 1225 aa11.25□□□□□ -0.61
TRIM44-202ENST00000532066 ANKRD30BQ9BXX2 1392 aa11.25□□□□□ -0.61
TRIM44-202ENST00000532066 WDR7Q9Y4E6 1490 aa11.25□□□□□ -0.61
TRIM44-202ENST00000532066 TTC37Q6PGP7 1564 aa11.24□□□□□ -0.61
TRIM44-202ENST00000532066 CDC42BPBQ9Y5S2 1711 aa11.24□□□□□ -0.61
TRIM44-202ENST00000532066 DENND4BO75064 1496 aaPredicted RBP11.23□□□□□ -0.61
TRIM44-202ENST00000532066 KDM5DQ9BY66 1539 aa11.23□□□□□ -0.61
TRIM44-202ENST00000532066 PZPP20742 1482 aa11.22□□□□□ -0.61
TRIM44-202ENST00000532066 RPRD2Q5VT52 1461 aaKnown RBP11.22□□□□□ -0.61
TRIM44-202ENST00000532066 SYCP2Q9BX26 1530 aa11.21□□□□□ -0.61
TRIM44-202ENST00000532066 NUP155O75694 1391 aa11.21□□□□□ -0.61
TRIM44-202ENST00000532066 RTEL1-TNFRSF6BF6WH68 1400 aa11.2□□□□□ -0.62
TRIM44-202ENST00000532066 SPDYE4A6NLX3 237 aa11.2□□□□□ -0.62
TRIM44-202ENST00000532066 CENPBP07199 599 aaPredicted RBP11.2□□□□□ -0.62
TRIM44-202ENST00000532066 CLCN6P51797 869 aa11.2□□□□□ -0.62
TRIM44-202ENST00000532066 AMER1Q5JTC6 1135 aaPredicted RBP11.2□□□□□ -0.62
TRIM44-202ENST00000532066 PLXNC1O60486 1568 aa11.2□□□□□ -0.62
TRIM44-202ENST00000532066 PKD2Q13563 968 aa11.19□□□□□ -0.62
TRIM44-202ENST00000532066 DUOX2Q9NRD8 1548 aa11.19□□□□□ -0.62
TRIM44-202ENST00000532066 ABCC1P33527 1531 aa11.18□□□□□ -0.62
TRIM44-202ENST00000532066 ASXL2Q76L83 1435 aa11.18□□□□□ -0.62
TRIM44-202ENST00000532066 ERBINQ96RT1 1412 aa11.18□□□□□ -0.62
TRIM44-202ENST00000532066 ABCA9Q8IUA7 1624 aa11.17□□□□□ -0.62
TRIM44-202ENST00000532066 CREBZFQ9NS37 354 aa11.17□□□□□ -0.62
TRIM44-202ENST00000532066 MIER1Q8N108 512 aa11.16□□□□□ -0.62
TRIM44-202ENST00000532066 L3MBTL2Q969R5 705 aa11.16□□□□□ -0.62
TRIM44-202ENST00000532066 SPAG9O60271 1321 aaKnown RBP11.15□□□□□ -0.62
TRIM44-202ENST00000532066 FANCAO15360 1455 aa11.14□□□□□ -0.63
TRIM44-202ENST00000532066 EIF4G2P78344 907 aaKnown RBP eCLIP11.14□□□□□ -0.63
TRIM44-202ENST00000532066 ARHGEF12Q9NZN5 1544 aa11.14□□□□□ -0.63
TRIM44-202ENST00000532066 UNC13BO14795 1591 aa11.13□□□□□ -0.63
TRIM44-202ENST00000532066 LHX8Q68G74 356 aa11.13□□□□□ -0.63
TRIM44-202ENST00000532066 TEX14Q8IWB6 1497 aa11.12□□□□□ -0.63
TRIM44-202ENST00000532066 CFAP74Q9C0B2 1584 aa11.11□□□□□ -0.63
TRIM44-202ENST00000532066 TRAPPC8Q9Y2L5 1435 aa11.11□□□□□ -0.63
TRIM44-202ENST00000532066 FAM135AQ9P2D6 1515 aa11.11□□□□□ -0.63
TRIM44-202ENST00000532066 ZNF579Q8NAF0 562 aaKnown RBP11.11□□□□□ -0.63
TRIM44-202ENST00000532066 POTEIP0CG38 1075 aa11.1□□□□□ -0.63
TRIM44-202ENST00000532066 ADGRL1O94910 1474 aa11.1□□□□□ -0.63
TRIM44-202ENST00000532066 MAGI2Q86UL8 1455 aa11.1□□□□□ -0.63
TRIM44-202ENST00000532066 SCAPERQ9BY12 1400 aa11.09□□□□□ -0.63
TRIM44-202ENST00000532066 KANK1Q14678 1352 aa11.09□□□□□ -0.63
TRIM44-202ENST00000532066 IQGAP3Q86VI3 1631 aa11.09□□□□□ -0.63
TRIM44-202ENST00000532066 CD109Q6YHK3 1445 aa11.09□□□□□ -0.63
TRIM44-202ENST00000532066 ZRANB1Q9UGI0 708 aa11.08□□□□□ -0.64
TRIM44-202ENST00000532066 ZFYVE16Q7Z3T8 1539 aa11.08□□□□□ -0.64
TRIM44-202ENST00000532066 UHRF1BP1Q6BDS2 1440 aa11.08□□□□□ -0.64
TRIM44-202ENST00000532066 ATP10AO60312 1499 aa11.07□□□□□ -0.64
TRIM44-202ENST00000532066 ZNF518AQ6AHZ1 1483 aa11.07□□□□□ -0.64
TRIM44-202ENST00000532066 HSPA5P11021 654 aaKnown RBP11.07□□□□□ -0.64
TRIM44-202ENST00000532066 DDX10Q13206 875 aaKnown RBP11.07□□□□□ -0.64
TRIM44-202ENST00000532066 AFAP1Q8N556 730 aa11.07□□□□□ -0.64
TRIM44-202ENST00000532066 ATP7AQ04656 1500 aa11.07□□□□□ -0.64
TRIM44-202ENST00000532066 CCDC144AA2RUR9 1427 aa11.07□□□□□ -0.64
TRIM44-202ENST00000532066 NEO1Q92859 1461 aa11.06□□□□□ -0.64
TRIM44-202ENST00000532066 DHX29Q7Z478 1369 aaKnown RBP11.05□□□□□ -0.64
TRIM44-202ENST00000532066 ANP32CO43423 234 aa11.05□□□□□ -0.64
TRIM44-202ENST00000532066 STAC3Q96MF2 364 aa11.05□□□□□ -0.64
TRIM44-202ENST00000532066 INO80Q9ULG1 1556 aaPredicted RBP11.05□□□□□ -0.64
TRIM44-202ENST00000532066 NBPF8Q3BBV2 869 aa11.04□□□□□ -0.64
TRIM44-202ENST00000532066 MYT1LQ9UL68 1186 aa11.04□□□□□ -0.64
TRIM44-202ENST00000532066 ARID4BQ4LE39 1312 aaPredicted RBP11.04□□□□□ -0.64
TRIM44-202ENST00000532066 EIF2AK4Q9P2K8 1649 aaKnown RBP11.03□□□□□ -0.64
TRIM44-202ENST00000532066 CCER2I3L3R5 266 aa11.03□□□□□ -0.64
TRIM44-202ENST00000532066 MLH3Q9UHC1 1453 aa11.02□□□□□ -0.65
TRIM44-202ENST00000532066 DCBLD2Q96PD2 775 aa11.02□□□□□ -0.65
TRIM44-202ENST00000532066 POGZQ7Z3K3 1410 aa11.01□□□□□ -0.65
TRIM44-202ENST00000532066 RALGAPBQ86X10 1494 aa11.01□□□□□ -0.65
TRIM44-202ENST00000532066 HIRIP3Q9BW71 556 aaPredicted RBP11.01□□□□□ -0.65
TRIM44-202ENST00000532066 SPATA31E1Q6ZUB1 1445 aa11.01□□□□□ -0.65
TRIM44-202ENST00000532066 GLI2P10070 1586 aa11□□□□□ -0.65
TRIM44-202ENST00000532066 DEPDC5O75140 1603 aa11□□□□□ -0.65
TRIM44-202ENST00000532066 KIF3BO15066 747 aa10.99□□□□□ -0.65
TRIM44-202ENST00000532066 CYB5RLQ6IPT4 315 aa10.99□□□□□ -0.65
TRIM44-202ENST00000532066 DCAF11Q8TEB1 546 aa10.99□□□□□ -0.65
TRIM44-202ENST00000532066 A2MP01023 1474 aa10.99□□□□□ -0.65
TRIM44-202ENST00000532066 PLA2R1Q13018 1463 aa10.99□□□□□ -0.65
TRIM44-202ENST00000532066 KDM5CP41229 1560 aa10.99□□□□□ -0.65
TRIM44-202ENST00000532066 PAK3O75914 559 aaPredicted RBP10.98□□□□□ -0.65
TRIM44-202ENST00000532066 ZNF326Q5BKZ1 582 aaKnown RBP10.98□□□□□ -0.65
TRIM44-202ENST00000532066 YTHDC1Q96MU7 727 aaKnown RBP10.98□□□□□ -0.65
TRIM44-202ENST00000532066 WASHC2AQ641Q2 1341 aa10.98□□□□□ -0.65
TRIM44-202ENST00000532066 USP47Q96K76 1375 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms