RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-222ENST00000531967 MFSD10Q14728 455 aa7.43□□□□□ -1.22
ECHDC1-222ENST00000531967 LOC102724159A0A0B4J2E5 919 aa7.43□□□□□ -1.22
ECHDC1-222ENST00000531967 MARCH6O60337 910 aa7.43□□□□□ -1.22
ECHDC1-222ENST00000531967 PWP2Q15269 919 aaKnown RBP7.43□□□□□ -1.22
ECHDC1-222ENST00000531967 OXER1Q8TDS5 423 aa7.43□□□□□ -1.22
ECHDC1-222ENST00000531967 PLEKHD1A6NEE1 506 aa7.42□□□□□ -1.22
ECHDC1-222ENST00000531967 UBXN4Q92575 508 aa7.42□□□□□ -1.22
ECHDC1-222ENST00000531967 GLMNQ92990 594 aa7.42□□□□□ -1.22
ECHDC1-222ENST00000531967 RIPOR2Q9Y4F9 1068 aa7.42□□□□□ -1.22
ECHDC1-222ENST00000531967 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.42□□□□□ -1.22
ECHDC1-222ENST00000531967 PYGBP11216 843 aa7.42□□□□□ -1.22
ECHDC1-222ENST00000531967 CAMK2BQ13554 666 aa7.42□□□□□ -1.22
ECHDC1-222ENST00000531967 GIGYF2Q6Y7W6 1299 aaKnown RBP7.41□□□□□ -1.22
ECHDC1-222ENST00000531967 PPP1R1BQ9UD71 204 aaPredicted RBP7.4□□□□□ -1.23
ECHDC1-222ENST00000531967 ZNF16P17020 682 aaPredicted RBP7.39□□□□□ -1.23
ECHDC1-222ENST00000531967 PDE4AP27815 886 aa7.39□□□□□ -1.23
ECHDC1-222ENST00000531967 DDX27Q96GQ7 796 aaKnown RBP7.39□□□□□ -1.23
ECHDC1-222ENST00000531967 VRTNQ9H8Y1 702 aa7.39□□□□□ -1.23
ECHDC1-222ENST00000531967 SNRKQ9NRH2 765 aa7.39□□□□□ -1.23
ECHDC1-222ENST00000531967 GNEQ9Y223 722 aaKnown RBP7.38□□□□□ -1.23
ECHDC1-222ENST00000531967 POM121CA8CG34 1229 aa7.37□□□□□ -1.23
ECHDC1-222ENST00000531967 RFX1P22670 979 aa7.37□□□□□ -1.23
ECHDC1-222ENST00000531967 SRPK2P78362 688 aaKnown RBP7.37□□□□□ -1.23
ECHDC1-222ENST00000531967 GIMAP6Q6P9H5 292 aa7.37□□□□□ -1.23
ECHDC1-222ENST00000531967 ZC3H6P61129 1189 aaKnown RBP7.37□□□□□ -1.23
ECHDC1-222ENST00000531967 EXOC8Q8IYI6 725 aa7.37□□□□□ -1.23
ECHDC1-222ENST00000531967 PROCA1Q8NCQ7 364 aaPredicted RBP7.37□□□□□ -1.23
ECHDC1-222ENST00000531967 SPINK5Q9NQ38 1064 aaPredicted RBP7.37□□□□□ -1.23
ECHDC1-222ENST00000531967 ZNF326Q5BKZ1 582 aaKnown RBP7.36□□□□□ -1.23
ECHDC1-222ENST00000531967 PPME1Q9Y570 386 aa7.36□□□□□ -1.23
ECHDC1-222ENST00000531967 ERCC3P19447 782 aa7.36□□□□□ -1.23
ECHDC1-222ENST00000531967 DNAJC14Q6Y2X3 702 aaPredicted RBP7.36□□□□□ -1.23
ECHDC1-222ENST00000531967 GDPD2Q9HCC8 539 aa7.36□□□□□ -1.23
ECHDC1-222ENST00000531967 MYH16Q9H6N6 1097 aa7.35□□□□□ -1.23
ECHDC1-222ENST00000531967 ZNF662Q6ZS27 426 aa7.35□□□□□ -1.23
ECHDC1-222ENST00000531967 TEX2Q8IWB9 1127 aa7.35□□□□□ -1.23
ECHDC1-222ENST00000531967 WWC1Q8IX03 1113 aa7.35□□□□□ -1.23
ECHDC1-222ENST00000531967 MICAL1Q8TDZ2 1067 aa7.35□□□□□ -1.23
ECHDC1-222ENST00000531967 CRISPLD2Q9H0B8 497 aa7.35□□□□□ -1.23
ECHDC1-222ENST00000531967 ATP1B4Q9UN42 357 aaPredicted RBP7.35□□□□□ -1.23
ECHDC1-222ENST00000531967 RASEFQ8IZ41 740 aa7.34□□□□□ -1.23
ECHDC1-222ENST00000531967 SF3A1Q15459 793 aaKnown RBP7.34□□□□□ -1.23
ECHDC1-222ENST00000531967 OSCARQ8IYS5 282 aa7.34□□□□□ -1.23
ECHDC1-222ENST00000531967 BANK1Q8NDB2 785 aa7.34□□□□□ -1.23
ECHDC1-222ENST00000531967 REPIN1Q9BWE0 567 aaKnown RBP7.34□□□□□ -1.23
ECHDC1-222ENST00000531967 A0A0U1RQG5 324 aaPredicted RBP7.33□□□□□ -1.24
ECHDC1-222ENST00000531967 CFAP70Q5T0N1 1121 aa7.33□□□□□ -1.24
ECHDC1-222ENST00000531967 BCL2L13Q9BXK5 485 aa7.33□□□□□ -1.24
ECHDC1-222ENST00000531967 FGD1P98174 961 aa7.33□□□□□ -1.24
ECHDC1-222ENST00000531967 TMEM88BA6NKF7 163 aa7.32□□□□□ -1.24
ECHDC1-222ENST00000531967 TPD52L2O43399 206 aaKnown RBP7.32□□□□□ -1.24
ECHDC1-222ENST00000531967 NAALADL2Q58DX5 795 aa7.32□□□□□ -1.24
ECHDC1-222ENST00000531967 FBXO22Q8NEZ5 403 aa7.32□□□□□ -1.24
ECHDC1-222ENST00000531967 SUGT1Q9Y2Z0 365 aa7.32□□□□□ -1.24
ECHDC1-222ENST00000531967 GNPATO15228 680 aa7.32□□□□□ -1.24
ECHDC1-222ENST00000531967 ZNF467Q7Z7K2 595 aaPredicted RBP7.31□□□□□ -1.24
ECHDC1-222ENST00000531967 RBM27Q9P2N5 1060 aaKnown RBP7.31□□□□□ -1.24
ECHDC1-222ENST00000531967 FECHP22830 423 aa7.31□□□□□ -1.24
ECHDC1-222ENST00000531967 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.31□□□□□ -1.24
ECHDC1-222ENST00000531967 NUTM2FA1L443 756 aa7.3□□□□□ -1.24
ECHDC1-222ENST00000531967 RAB11FIP3O75154 756 aa7.3□□□□□ -1.24
ECHDC1-222ENST00000531967 ABL2P42684 1182 aa7.3□□□□□ -1.24
ECHDC1-222ENST00000531967 PDAP1Q13442 181 aaKnown RBP7.3□□□□□ -1.24
ECHDC1-222ENST00000531967 GORABQ5T7V8 394 aa7.3□□□□□ -1.24
ECHDC1-222ENST00000531967 GIPC2Q8TF65 315 aa7.3□□□□□ -1.24
ECHDC1-222ENST00000531967 POLR3EQ9NVU0 708 aa7.3□□□□□ -1.24
ECHDC1-222ENST00000531967 NOM1Q5C9Z4 860 aaKnown RBP7.29□□□□□ -1.24
ECHDC1-222ENST00000531967 SLC52A1Q9NWF4 448 aa7.29□□□□□ -1.24
ECHDC1-222ENST00000531967 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.29□□□□□ -1.243e-7■■□□□ 13.1
ECHDC1-222ENST00000531967 SETQ01105 290 aaPredicted RBP7.29□□□□□ -1.24
ECHDC1-222ENST00000531967 DPH6Q7L8W6 267 aa7.29□□□□□ -1.24
ECHDC1-222ENST00000531967 CCDC136Q96JN2 1154 aa7.29□□□□□ -1.24
ECHDC1-222ENST00000531967 NLRP6P59044 892 aa7.28□□□□□ -1.24
ECHDC1-222ENST00000531967 RFC5P40937 340 aa7.28□□□□□ -1.24
ECHDC1-222ENST00000531967 MTMR14Q8NCE2 650 aa7.28□□□□□ -1.24
ECHDC1-222ENST00000531967 PDIA6Q15084 440 aa7.27□□□□□ -1.25
ECHDC1-222ENST00000531967 HSP90AB4PQ58FF6 505 aa7.27□□□□□ -1.25
ECHDC1-222ENST00000531967 SPDYE16A6NNV3 312 aaPredicted RBP7.27□□□□□ -1.25
ECHDC1-222ENST00000531967 FOSBP53539 338 aa7.27□□□□□ -1.25
ECHDC1-222ENST00000531967 DPYSL4O14531 572 aa7.26□□□□□ -1.25
ECHDC1-222ENST00000531967 VAMP1P23763 118 aa7.26□□□□□ -1.25
ECHDC1-222ENST00000531967 HIC1Q14526 733 aa7.26□□□□□ -1.25
ECHDC1-222ENST00000531967 HDGFL1Q5TGJ6 251 aa7.26□□□□□ -1.25
ECHDC1-222ENST00000531967 TBC1D2Q9BYX2 928 aa7.26□□□□□ -1.25
ECHDC1-222ENST00000531967 MAFGO15525 162 aa7.26□□□□□ -1.25
ECHDC1-222ENST00000531967 RBM46Q8TBY0 533 aaKnown RBP7.26□□□□□ -1.25
ECHDC1-222ENST00000531967 ADAMTS19Q8TE59 1207 aa7.26□□□□□ -1.25
ECHDC1-222ENST00000531967 B4GALNT3Q6L9W6 998 aa7.25□□□□□ -1.25
ECHDC1-222ENST00000531967 CCER1Q8TC90 406 aaPredicted RBP7.25□□□□□ -1.25
ECHDC1-222ENST00000531967 PKNOX2Q96KN3 472 aa7.25□□□□□ -1.25
ECHDC1-222ENST00000531967 CDCA7Q9BWT1 371 aaPredicted RBP7.25□□□□□ -1.25
ECHDC1-222ENST00000531967 PPP1R12CQ9BZL4 782 aa7.25□□□□□ -1.25
ECHDC1-222ENST00000531967 CAPN15O75808 1086 aa7.24□□□□□ -1.25
ECHDC1-222ENST00000531967 MNX1P50219 401 aaPredicted RBP7.24□□□□□ -1.25
ECHDC1-222ENST00000531967 PHF8Q9UPP1 1060 aa7.24□□□□□ -1.25
ECHDC1-222ENST00000531967 ABCB7O75027 752 aa7.24□□□□□ -1.25
ECHDC1-222ENST00000531967 ANAPC15P60006 121 aa7.24□□□□□ -1.25
ECHDC1-222ENST00000531967 PLCD4Q9BRC7 762 aa7.24□□□□□ -1.25
ECHDC1-222ENST00000531967 TMUB1Q9BVT8 246 aa7.24□□□□□ -1.25
ECHDC1-222ENST00000531967 CENPBP07199 599 aaPredicted RBP7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms