RNA–Protein interactions for RNA: ENST00000531637.5

USP33-217, Transcript of ubiquitin specific peptidase 33, humanhuman

TSL 3

Gene USP33, Length 384 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP33-217ENST00000531637 CDHR5Q9HBB8 845 aa11.01□□□□□ -0.65
USP33-217ENST00000531637 CLCN1P35523 988 aa11□□□□□ -0.65
USP33-217ENST00000531637 ZSWIM6Q9HCJ5 1215 aa11□□□□□ -0.65
USP33-217ENST00000531637 GOPCQ9HD26 462 aa10.98□□□□□ -0.65
USP33-217ENST00000531637 NPDC1Q9NQX5 325 aaPredicted RBP10.98□□□□□ -0.65
USP33-217ENST00000531637 FOSBP53539 338 aa10.97□□□□□ -0.65
USP33-217ENST00000531637 GIGYF2Q6Y7W6 1299 aaKnown RBP10.97□□□□□ -0.65
USP33-217ENST00000531637 ZDHHC16Q969W1 377 aa10.97□□□□□ -0.65
USP33-217ENST00000531637 RBM27Q9P2N5 1060 aaKnown RBP10.97□□□□□ -0.65
USP33-217ENST00000531637 KDM4FA0A1W2PPD8 638 aa10.96□□□□□ -0.65
USP33-217ENST00000531637 OATP04181 439 aa10.96□□□□□ -0.65
USP33-217ENST00000531637 TSR1Q2NL82 804 aaKnown RBP10.96□□□□□ -0.65
USP33-217ENST00000531637 MAMSTRQ6ZN01 415 aa10.96□□□□□ -0.65
USP33-217ENST00000531637 SCUBE2Q9NQ36 999 aa10.96□□□□□ -0.65
USP33-217ENST00000531637 PLEKHG3A1L390 1219 aa10.95□□□□□ -0.66
USP33-217ENST00000531637 ZNF454Q8N9F8 522 aa10.95□□□□□ -0.66
USP33-217ENST00000531637 GPCPD1Q9NPB8 672 aa10.95□□□□□ -0.66
USP33-217ENST00000531637 PSDA5PKW4 1024 aaPredicted RBP10.93□□□□□ -0.66
USP33-217ENST00000531637 C6orf132Q5T0Z8 1188 aa10.93□□□□□ -0.66
USP33-217ENST00000531637 ZNF710Q8N1W2 664 aa10.92□□□□□ -0.66
USP33-217ENST00000531637 ARXQ96QS3 562 aa10.91□□□□□ -0.66
USP33-217ENST00000531637 NUDT7P0C024 238 aa10.9□□□□□ -0.66
USP33-217ENST00000531637 MDM2Q00987 491 aaPredicted RBP10.9□□□□□ -0.66
USP33-217ENST00000531637 PCMTD1Q96MG8 357 aaPredicted RBP10.9□□□□□ -0.66
USP33-217ENST00000531637 PADI6Q6TGC4 694 aa10.89□□□□□ -0.67
USP33-217ENST00000531637 RSPH6AQ9H0K4 717 aa10.89□□□□□ -0.67
USP33-217ENST00000531637 MS4A1P11836 297 aa10.88□□□□□ -0.67
USP33-217ENST00000531637 ARSIQ5FYB1 569 aa10.88□□□□□ -0.67
USP33-217ENST00000531637 PPP4R3BQ5MIZ7 849 aa10.88□□□□□ -0.67
USP33-217ENST00000531637 METTL3Q86U44 580 aaKnown RBP10.88□□□□□ -0.67
USP33-217ENST00000531637 TMUB1Q9BVT8 246 aa10.88□□□□□ -0.67
USP33-217ENST00000531637 HOXB3P14651 431 aaPredicted RBP10.87□□□□□ -0.67
USP33-217ENST00000531637 FLIIQ13045 1269 aa10.87□□□□□ -0.67
USP33-217ENST00000531637 SNPHO15079 494 aa10.86□□□□□ -0.67
USP33-217ENST00000531637 SH3D19Q5HYK7 790 aa10.86□□□□□ -0.67
USP33-217ENST00000531637 RBM46Q8TBY0 533 aaKnown RBP10.86□□□□□ -0.67
USP33-217ENST00000531637 ADGRG1Q9Y653 693 aa10.86□□□□□ -0.67
USP33-217ENST00000531637 PRSS12P56730 875 aa10.85□□□□□ -0.67
USP33-217ENST00000531637 ADAM33Q9BZ11 813 aa10.85□□□□□ -0.67
USP33-217ENST00000531637 SSTR3P32745 418 aaPredicted RBP10.84□□□□□ -0.67
USP33-217ENST00000531637 GPR153Q6NV75 609 aa10.84□□□□□ -0.67
USP33-217ENST00000531637 TTC13Q8NBP0 860 aa10.84□□□□□ -0.67
USP33-217ENST00000531637 PXYLP1Q8TE99 480 aa10.84□□□□□ -0.67
USP33-217ENST00000531637 REPIN1Q9BWE0 567 aaKnown RBP10.84□□□□□ -0.67
USP33-217ENST00000531637 ZMYND15Q9H091 742 aa10.83□□□□□ -0.68
USP33-217ENST00000531637 CDCA7LQ96GN5 454 aa10.82□□□□□ -0.68
USP33-217ENST00000531637 PHOX2BQ99453 314 aa10.82□□□□□ -0.68
USP33-217ENST00000531637 FAM217BQ9NTX9 383 aaPredicted RBP10.82□□□□□ -0.68
USP33-217ENST00000531637 DIXDC1Q155Q3 683 aa10.81□□□□□ -0.68
USP33-217ENST00000531637 BCL2L12Q9HB09 334 aa10.81□□□□□ -0.68
USP33-217ENST00000531637 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.8□□□□□ -0.68
USP33-217ENST00000531637 PTPREP23469 700 aa10.8□□□□□ -0.68
USP33-217ENST00000531637 KHSRPQ92945 711 aaKnown RBP eCLIP10.8□□□□□ -0.684e-6■■□□□ 12.6
USP33-217ENST00000531637 BEGAINQ9BUH8 593 aa10.8□□□□□ -0.68
USP33-217ENST00000531637 LHX6Q9UPM6 363 aa10.8□□□□□ -0.68
USP33-217ENST00000531637 PPP1R3GB7ZBB8 358 aa10.79□□□□□ -0.68
USP33-217ENST00000531637 POTEJP0CG39 1038 aa10.79□□□□□ -0.68
USP33-217ENST00000531637 SKIV2LQ15477 1246 aaKnown RBP10.79□□□□□ -0.68
USP33-217ENST00000531637 KCNH8Q96L42 1107 aa10.79□□□□□ -0.68
USP33-217ENST00000531637 SUPT5HO00267 1087 aaKnown RBP10.77□□□□□ -0.69
USP33-217ENST00000531637 FAM161AQ3B820 660 aa10.77□□□□□ -0.69
USP33-217ENST00000531637 HOMEZQ8IX15 550 aa10.77□□□□□ -0.69
USP33-217ENST00000531637 NBPF26B4DH59 902 aa10.76□□□□□ -0.69
USP33-217ENST00000531637 ATP1B4Q9UN42 357 aaPredicted RBP10.76□□□□□ -0.69
USP33-217ENST00000531637 SULF1Q8IWU6 871 aa10.75□□□□□ -0.69
USP33-217ENST00000531637 POTEB2H3BUK9 544 aa10.74□□□□□ -0.69
USP33-217ENST00000531637 HOXB1P14653 301 aaPredicted RBP10.74□□□□□ -0.69
USP33-217ENST00000531637 PACS2Q86VP3 889 aa10.73□□□□□ -0.69
USP33-217ENST00000531637 RCCD1A6NED2 376 aa10.71□□□□□ -0.69
USP33-217ENST00000531637 ONECUT3O60422 494 aaPredicted RBP10.71□□□□□ -0.69
USP33-217ENST00000531637 COL9A1P20849 921 aa10.71□□□□□ -0.69
USP33-217ENST00000531637 DNAJB2P25686 324 aa10.71□□□□□ -0.69
USP33-217ENST00000531637 NLRP7Q8WX94 980 aa10.71□□□□□ -0.69
USP33-217ENST00000531637 TRIM6-TRIM34B2RNG4 842 aa10.7□□□□□ -0.7
USP33-217ENST00000531637 CLK2P49760 499 aaKnown RBP10.7□□□□□ -0.7
USP33-217ENST00000531637 EYA1Q99502 592 aa10.7□□□□□ -0.7
USP33-217ENST00000531637 MYSM1Q5VVJ2 828 aa10.69□□□□□ -0.7
USP33-217ENST00000531637 NUDT18Q6ZVK8 323 aa10.68□□□□□ -0.7
USP33-217ENST00000531637 TBC1D2Q9BYX2 928 aa10.68□□□□□ -0.7
USP33-217ENST00000531637 TSKSQ9UJT2 592 aa10.68□□□□□ -0.7
USP33-217ENST00000531637 PNMA3Q9UL41 463 aa10.68□□□□□ -0.7
USP33-217ENST00000531637 UBTFP17480 764 aaKnown RBP10.67□□□□□ -0.7
USP33-217ENST00000531637 TATDN2Q93075 761 aa10.67□□□□□ -0.7
USP33-217ENST00000531637 POLR3EQ9NVU0 708 aa10.67□□□□□ -0.7
USP33-217ENST00000531637 RSPH4AQ5TD94 716 aa10.66□□□□□ -0.7
USP33-217ENST00000531637 FAM198AQ9UFP1 575 aa10.66□□□□□ -0.7
USP33-217ENST00000531637 CD46P15529 392 aa10.65□□□□□ -0.7
USP33-217ENST00000531637 MCM6Q14566 821 aa10.65□□□□□ -0.7
USP33-217ENST00000531637 NUTM1Q86Y26 1132 aa10.65□□□□□ -0.7
USP33-217ENST00000531637 KCNK17Q96T54 332 aa10.65□□□□□ -0.7
USP33-217ENST00000531637 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.65□□□□□ -0.7
USP33-217ENST00000531637 TMEM134Q9H6X4 195 aa10.65□□□□□ -0.7
USP33-217ENST00000531637 A6NJR5 290 aa10.64□□□□□ -0.71
USP33-217ENST00000531637 TUSC1Q2TAM9 212 aa10.63□□□□□ -0.71
USP33-217ENST00000531637 DDX11L8A8MPP1 907 aa10.62□□□□□ -0.71
USP33-217ENST00000531637 SLC4A3P48751 1232 aa10.62□□□□□ -0.71
USP33-217ENST00000531637 PROCA1Q8NCQ7 364 aaPredicted RBP10.62□□□□□ -0.71
USP33-217ENST00000531637 BANK1Q8NDB2 785 aa10.62□□□□□ -0.71
USP33-217ENST00000531637 RAD21O60216 631 aa10.61□□□□□ -0.71
USP33-217ENST00000531637 GJA5P36382 358 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms