RNA–Protein interactions for RNA: ENST00000531613.1

PCDHA8-202, Transcript of protocadherin alpha 8, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA8, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA8-202ENST00000531613 ATAD2BQ9ULI0 1458 aa21.85■■□□□ 1.09
PCDHA8-202ENST00000531613 MSNP26038 577 aaKnown RBP21.84■■□□□ 1.09
PCDHA8-202ENST00000531613 PTMSP20962 102 aa21.84■■□□□ 1.09
PCDHA8-202ENST00000531613 TRIM6-TRIM34B2RNG4 842 aa21.84■■□□□ 1.09
PCDHA8-202ENST00000531613 ST20-MTHFSA0A0A6YYL1 179 aa21.83■■□□□ 1.08
PCDHA8-202ENST00000531613 RBM19Q9Y4C8 960 aaKnown RBP21.83■■□□□ 1.08
PCDHA8-202ENST00000531613 KIF15Q9NS87 1388 aa21.81■■□□□ 1.08
PCDHA8-202ENST00000531613 RTN4Q9NQC3 1192 aaKnown RBP21.8■■□□□ 1.08
PCDHA8-202ENST00000531613 MFAP1P55081 439 aaKnown RBP21.79■■□□□ 1.08
PCDHA8-202ENST00000531613 SLKQ9H2G2 1235 aaPredicted RBP21.79■■□□□ 1.08
PCDHA8-202ENST00000531613 FANCD2Q9BXW9 1451 aa21.78■■□□□ 1.08
PCDHA8-202ENST00000531613 GTF2E1P29083 439 aaPredicted RBP21.78■■□□□ 1.08
PCDHA8-202ENST00000531613 PANK3Q9H999 370 aa21.78■■□□□ 1.08
PCDHA8-202ENST00000531613 MYBBP1AQ9BQG0 1328 aaKnown RBP21.78■■□□□ 1.08
PCDHA8-202ENST00000531613 COG3Q96JB2 828 aa21.77■■□□□ 1.08
PCDHA8-202ENST00000531613 EVC2Q86UK5 1308 aa21.77■■□□□ 1.08
PCDHA8-202ENST00000531613 CYB5RLQ6IPT4 315 aa21.77■■□□□ 1.07
PCDHA8-202ENST00000531613 CGNL1Q0VF96 1302 aa21.76■■□□□ 1.07
PCDHA8-202ENST00000531613 CCDC34Q96HJ3 373 aa21.76■■□□□ 1.07
PCDHA8-202ENST00000531613 SYAP1Q96A49 352 aaPredicted RBP21.75■■□□□ 1.07
PCDHA8-202ENST00000531613 G3V3G9 751 aa21.75■■□□□ 1.07
PCDHA8-202ENST00000531613 DCAF8Q5TAQ9 597 aa21.75■■□□□ 1.07
PCDHA8-202ENST00000531613 HSP90B1P14625 803 aaKnown RBP21.74■■□□□ 1.07
PCDHA8-202ENST00000531613 RRP7AQ9Y3A4 280 aaKnown RBP21.73■■□□□ 1.07
PCDHA8-202ENST00000531613 OSCARQ8IYS5 282 aa21.73■■□□□ 1.07
PCDHA8-202ENST00000531613 FRAT2O75474 233 aaPredicted RBP21.71■■□□□ 1.07
PCDHA8-202ENST00000531613 C1orf141Q5JVX7 400 aa21.71■■□□□ 1.07
PCDHA8-202ENST00000531613 KIAA2012Q0VF49 1180 aa21.7■■□□□ 1.06
PCDHA8-202ENST00000531613 MINK1Q8N4C8 1332 aaPredicted RBP21.68■■□□□ 1.06
PCDHA8-202ENST00000531613 TEFQ10587 303 aa21.68■■□□□ 1.06
PCDHA8-202ENST00000531613 ELL2O00472 640 aaPredicted RBP21.67■■□□□ 1.06
PCDHA8-202ENST00000531613 GZF1Q9H116 711 aaPredicted RBP21.67■■□□□ 1.06
PCDHA8-202ENST00000531613 TOMM22Q9NS69 142 aa21.67■■□□□ 1.06
PCDHA8-202ENST00000531613 TPM4P67936 248 aa21.66■■□□□ 1.06
PCDHA8-202ENST00000531613 DHX57Q6P158 1386 aaKnown RBP21.66■■□□□ 1.06
PCDHA8-202ENST00000531613 CSPP1Q1MSJ5 1256 aa21.66■■□□□ 1.06
PCDHA8-202ENST00000531613 KIF3AQ9Y496 699 aa21.65■■□□□ 1.06
PCDHA8-202ENST00000531613 NCBP3Q53F19 620 aaKnown RBP21.65■■□□□ 1.06
PCDHA8-202ENST00000531613 EVA1CP58658 441 aa21.65■■□□□ 1.06
PCDHA8-202ENST00000531613 E9PSI1 815 aa21.64■■□□□ 1.06
PCDHA8-202ENST00000531613 USP47Q96K76 1375 aa21.64■■□□□ 1.06
PCDHA8-202ENST00000531613 ST18O60284 1047 aa21.64■■□□□ 1.06
PCDHA8-202ENST00000531613 DEKP35659 375 aaKnown RBP21.64■■□□□ 1.05
PCDHA8-202ENST00000531613 SMARCA4P51532 1647 aa21.64■■□□□ 1.05
PCDHA8-202ENST00000531613 RASSF8Q8NHQ8 419 aa21.63■■□□□ 1.05
PCDHA8-202ENST00000531613 NOL8Q76FK4 1167 aaKnown RBP21.63■■□□□ 1.05
PCDHA8-202ENST00000531613 ZKSCAN2Q63HK3 967 aa21.62■■□□□ 1.05
PCDHA8-202ENST00000531613 KIF16BQ96L93 1317 aa21.62■■□□□ 1.05
PCDHA8-202ENST00000531613 PRKRIP1Q9H875 184 aaPredicted RBP21.62■■□□□ 1.05
PCDHA8-202ENST00000531613 BCL2L13Q9BXK5 485 aa21.61■■□□□ 1.05
PCDHA8-202ENST00000531613 TTC5Q8N0Z6 440 aa21.6■■□□□ 1.05
PCDHA8-202ENST00000531613 NEXNQ0ZGT2 675 aa21.59■■□□□ 1.05
PCDHA8-202ENST00000531613 MYOM3Q5VTT5 1437 aa21.59■■□□□ 1.05
PCDHA8-202ENST00000531613 GAPVD1Q14C86 1478 aa21.59■■□□□ 1.05
PCDHA8-202ENST00000531613 RUSC2Q8N2Y8 1516 aa21.59■■□□□ 1.05
PCDHA8-202ENST00000531613 DIAPH1O60610 1272 aaKnown RBP21.57■■□□□ 1.04
PCDHA8-202ENST00000531613 IPO9Q96P70 1041 aaKnown RBP21.57■■□□□ 1.04
PCDHA8-202ENST00000531613 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.57■■□□□ 1.04
PCDHA8-202ENST00000531613 CENPQQ7L2Z9 268 aaPredicted RBP21.57■■□□□ 1.04
PCDHA8-202ENST00000531613 ANKRD45Q5TZF3 282 aa21.56■■□□□ 1.04
PCDHA8-202ENST00000531613 RILPL2Q969X0 211 aa21.56■■□□□ 1.04
PCDHA8-202ENST00000531613 FOXD4L1Q9NU39 408 aa21.55■■□□□ 1.04
PCDHA8-202ENST00000531613 APAF1O14727 1248 aa21.55■■□□□ 1.04
PCDHA8-202ENST00000531613 NGEFQ8N5V2 710 aa21.55■■□□□ 1.04
PCDHA8-202ENST00000531613 PSME1Q06323 249 aa21.54■■□□□ 1.04
PCDHA8-202ENST00000531613 SF3A1Q15459 793 aaKnown RBP21.54■■□□□ 1.04
PCDHA8-202ENST00000531613 CHMP4CQ96CF2 233 aa21.54■■□□□ 1.04
PCDHA8-202ENST00000531613 STAC3Q96MF2 364 aa21.54■■□□□ 1.04
PCDHA8-202ENST00000531613 FAM69CQ0P6D2 419 aa21.54■■□□□ 1.04
PCDHA8-202ENST00000531613 GOLGA6L3A6NEY3 463 aa21.53■■□□□ 1.04
PCDHA8-202ENST00000531613 IGF1RP08069 1367 aa21.53■■□□□ 1.04
PCDHA8-202ENST00000531613 FGD5Q6ZNL6 1462 aa21.52■■□□□ 1.04
PCDHA8-202ENST00000531613 MARCH6O60337 910 aa21.52■■□□□ 1.04
PCDHA8-202ENST00000531613 EIF2S2P20042 333 aaKnown RBP21.52■■□□□ 1.04
PCDHA8-202ENST00000531613 LRRFIP1Q32MZ4 808 aaKnown RBP21.52■■□□□ 1.04
PCDHA8-202ENST00000531613 C9orf78Q9NZ63 289 aaPredicted RBP21.52■■□□□ 1.04
PCDHA8-202ENST00000531613 ZBED9Q6R2W3 1325 aa21.5■■□□□ 1.03
PCDHA8-202ENST00000531613 PHF14O94880 888 aa21.49■■□□□ 1.03
PCDHA8-202ENST00000531613 COG6Q9Y2V7 657 aa21.49■■□□□ 1.03
PCDHA8-202ENST00000531613 API5Q9BZZ5 524 aaKnown RBP21.49■■□□□ 1.03
PCDHA8-202ENST00000531613 PLIN1O60240 522 aa21.49■■□□□ 1.03
PCDHA8-202ENST00000531613 RRP1P56182 461 aaKnown RBP21.49■■□□□ 1.03
PCDHA8-202ENST00000531613 DIAPH3Q9NSV4 1193 aa21.49■■□□□ 1.03
PCDHA8-202ENST00000531613 NOC3LQ8WTT2 800 aaKnown RBP21.48■■□□□ 1.03
PCDHA8-202ENST00000531613 RIPK4P57078 832 aa21.48■■□□□ 1.03
PCDHA8-202ENST00000531613 DDX19BQ9UMR2 479 aa21.48■■□□□ 1.03
PCDHA8-202ENST00000531613 DDX58O95786 925 aaKnown RBP21.48■■□□□ 1.03
PCDHA8-202ENST00000531613 H3BQV1 296 aa21.47■■□□□ 1.03
PCDHA8-202ENST00000531613 IFFO2Q5TF58 517 aa21.47■■□□□ 1.03
PCDHA8-202ENST00000531613 MSH5O43196 834 aa21.47■■□□□ 1.03
PCDHA8-202ENST00000531613 FAM161AQ3B820 660 aa21.47■■□□□ 1.03
PCDHA8-202ENST00000531613 VPS53Q5VIR6 699 aa21.47■■□□□ 1.03
PCDHA8-202ENST00000531613 FAM184AQ8NB25 1140 aa21.47■■□□□ 1.03
PCDHA8-202ENST00000531613 AKAP17AQ02040 695 aaKnown RBP21.46■■□□□ 1.03
PCDHA8-202ENST00000531613 CREBRFQ8IUR6 639 aa21.46■■□□□ 1.03
PCDHA8-202ENST00000531613 RUFY2Q8WXA3 655 aa21.46■■□□□ 1.03
PCDHA8-202ENST00000531613 ATP6V1DQ9Y5K8 247 aa21.45■■□□□ 1.02
PCDHA8-202ENST00000531613 CPLX2Q6PUV4 134 aaKnown RBP21.44■■□□□ 1.02
PCDHA8-202ENST00000531613 RAD54L2Q9Y4B4 1467 aa21.44■■□□□ 1.02
PCDHA8-202ENST00000531613 SYNE3Q6ZMZ3 975 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms