RNA–Protein interactions for RNA: ENST00000531607.5

CHEK1-212, Transcript of checkpoint kinase 1, humanhuman

TSL 3

Gene CHEK1, Length 462 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-212ENST00000531607 NEURL4Q96JN8 1562 aa17.16■□□□□ 0.34
CHEK1-212ENST00000531607 UBAP1LF5GYI3 381 aa17.16■□□□□ 0.34
CHEK1-212ENST00000531607 PKD2Q13563 968 aa17.16■□□□□ 0.34
CHEK1-212ENST00000531607 KDM5DQ9BY66 1539 aa17.15■□□□□ 0.34
CHEK1-212ENST00000531607 FAM135AQ9P2D6 1515 aa17.13■□□□□ 0.33
CHEK1-212ENST00000531607 MBD5Q9P267 1494 aa17.12■□□□□ 0.33
CHEK1-212ENST00000531607 CPS1P31327 1500 aa17.11■□□□□ 0.33
CHEK1-212ENST00000531607 MED1Q15648 1581 aaPredicted RBP17.11■□□□□ 0.33
CHEK1-212ENST00000531607 ZNF644Q9H582 1327 aaPredicted RBP17.1■□□□□ 0.33
CHEK1-212ENST00000531607 RTEL1-TNFRSF6BF6WH68 1400 aa17.1■□□□□ 0.33
CHEK1-212ENST00000531607 CCDC141Q6ZP82 1450 aa17.1■□□□□ 0.33
CHEK1-212ENST00000531607 IQGAP1P46940 1657 aa17.1■□□□□ 0.33
CHEK1-212ENST00000531607 ZC3H13Q5T200 1668 aaKnown RBP17.1■□□□□ 0.33
CHEK1-212ENST00000531607 PZPP20742 1482 aa17.09■□□□□ 0.33
CHEK1-212ENST00000531607 CAMSAP2Q08AD1 1489 aa17.09■□□□□ 0.33
CHEK1-212ENST00000531607 CFAP65Q6ZU64 1925 aaKnown RBP17.09■□□□□ 0.33
CHEK1-212ENST00000531607 DEPDC5O75140 1603 aa17.08■□□□□ 0.32
CHEK1-212ENST00000531607 CEP162Q5TB80 1403 aa17.08■□□□□ 0.32
CHEK1-212ENST00000531607 TNRQ92752 1358 aa17.07■□□□□ 0.32
CHEK1-212ENST00000531607 SCAF1Q9H7N4 1312 aaKnown RBP17.06■□□□□ 0.32
CHEK1-212ENST00000531607 STRCP1A6NGW2 1772 aa17.06■□□□□ 0.32
CHEK1-212ENST00000531607 CEP152O94986 1710 aa17.06■□□□□ 0.32
CHEK1-212ENST00000531607 RNF17Q9BXT8 1623 aaKnown RBP17.06■□□□□ 0.32
CHEK1-212ENST00000531607 ARHGEF5Q12774 1597 aa17.06■□□□□ 0.32
CHEK1-212ENST00000531607 VWDEQ8N2E2 1590 aa17.06■□□□□ 0.32
CHEK1-212ENST00000531607 DHX29Q7Z478 1369 aaKnown RBP17.05■□□□□ 0.32
CHEK1-212ENST00000531607 SHANK2Q9UPX8 1470 aa17.05■□□□□ 0.32
CHEK1-212ENST00000531607 UGGT1Q9NYU2 1555 aa17.04■□□□□ 0.32
CHEK1-212ENST00000531607 NCOA2Q15596 1464 aa17.04■□□□□ 0.32
CHEK1-212ENST00000531607 SYNMO15061 1565 aa17.03■□□□□ 0.32
CHEK1-212ENST00000531607 EIF2AK4Q9P2K8 1649 aaKnown RBP17.03■□□□□ 0.32
CHEK1-212ENST00000531607 NLRP1Q9C000 1473 aa17.02■□□□□ 0.32
CHEK1-212ENST00000531607 KIF3BO15066 747 aa17.02■□□□□ 0.32
CHEK1-212ENST00000531607 PIP4K2BP78356 416 aa17.01■□□□□ 0.31
CHEK1-212ENST00000531607 FBXO31Q5XUX0 539 aaPredicted RBP17■□□□□ 0.31
CHEK1-212ENST00000531607 UBR1Q8IWV7 1749 aa17■□□□□ 0.31
CHEK1-212ENST00000531607 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.99■□□□□ 0.31
CHEK1-212ENST00000531607 ALKQ9UM73 1620 aa16.99■□□□□ 0.31
CHEK1-212ENST00000531607 WASHC2CQ9Y4E1 1318 aa16.98■□□□□ 0.31
CHEK1-212ENST00000531607 MAST1Q9Y2H9 1570 aa16.98■□□□□ 0.31
CHEK1-212ENST00000531607 HSPA1LP34931 641 aa16.98■□□□□ 0.31
CHEK1-212ENST00000531607 MED14O60244 1454 aa16.98■□□□□ 0.31
CHEK1-212ENST00000531607 NPHP4O75161 1426 aaPredicted RBP16.97■□□□□ 0.31
CHEK1-212ENST00000531607 ABCC3O15438 1527 aa16.97■□□□□ 0.31
CHEK1-212ENST00000531607 TOM1O60784 492 aa16.97■□□□□ 0.31
CHEK1-212ENST00000531607 XIRP1Q702N8 1843 aaKnown RBP16.96■□□□□ 0.31
CHEK1-212ENST00000531607 MROH1Q8NDA8 1641 aa16.96■□□□□ 0.3
CHEK1-212ENST00000531607 MIA2Q96PC5 1412 aa16.96■□□□□ 0.3
CHEK1-212ENST00000531607 CROCC2H7BZ55 1655 aa16.95■□□□□ 0.3
CHEK1-212ENST00000531607 ANKLE2Q86XL3 938 aa16.95■□□□□ 0.3
CHEK1-212ENST00000531607 THEMISQ8N1K5 641 aaPredicted RBP16.93■□□□□ 0.3
CHEK1-212ENST00000531607 RSPH4AQ5TD94 716 aa16.92■□□□□ 0.3
CHEK1-212ENST00000531607 ERVK-7P63135 1459 aa16.92■□□□□ 0.3
CHEK1-212ENST00000531607 LRRC7Q96NW7 1537 aa16.9■□□□□ 0.3
CHEK1-212ENST00000531607 TSPY4P0CV99 314 aa16.88■□□□□ 0.29
CHEK1-212ENST00000531607 TSPY10P0CW01 314 aa16.88■□□□□ 0.29
CHEK1-212ENST00000531607 LRRC9Q6ZRR7 1453 aa16.87■□□□□ 0.29
CHEK1-212ENST00000531607 PRDM15P57071 1507 aaPredicted RBP16.86■□□□□ 0.29
CHEK1-212ENST00000531607 PIK3C2BO00750 1634 aa16.86■□□□□ 0.29
CHEK1-212ENST00000531607 DUOX2Q9NRD8 1548 aa16.86■□□□□ 0.29
CHEK1-212ENST00000531607 SCAF11Q99590 1463 aaKnown RBP16.85■□□□□ 0.29
CHEK1-212ENST00000531607 KDM5AP29375 1690 aaKnown RBP16.84■□□□□ 0.29
CHEK1-212ENST00000531607 SLIT1O75093 1534 aa16.82■□□□□ 0.28
CHEK1-212ENST00000531607 VPS8Q8N3P4 1428 aa16.82■□□□□ 0.28
CHEK1-212ENST00000531607 MYOM3Q5VTT5 1437 aa16.8■□□□□ 0.28
CHEK1-212ENST00000531607 PTPN23Q9H3S7 1636 aa16.8■□□□□ 0.28
CHEK1-212ENST00000531607 ARHGAP23Q9P227 1491 aa16.8■□□□□ 0.28
CHEK1-212ENST00000531607 MYO5BQ9ULV0 1848 aa16.78■□□□□ 0.28
CHEK1-212ENST00000531607 MAP3K1Q13233 1512 aa16.78■□□□□ 0.28
CHEK1-212ENST00000531607 ROBO1Q9Y6N7 1651 aa16.77■□□□□ 0.28
CHEK1-212ENST00000531607 ERBINQ96RT1 1412 aa16.76■□□□□ 0.27
CHEK1-212ENST00000531607 ARHGAP31Q2M1Z3 1444 aa16.75■□□□□ 0.27
CHEK1-212ENST00000531607 KIF15Q9NS87 1388 aa16.75■□□□□ 0.27
CHEK1-212ENST00000531607 EFCAB6Q5THR3 1501 aa16.75■□□□□ 0.27
CHEK1-212ENST00000531607 TXNDC2Q86VQ3 553 aa16.72■□□□□ 0.27
CHEK1-212ENST00000531607 GCC2Q8IWJ2 1684 aa16.72■□□□□ 0.27
CHEK1-212ENST00000531607 SETD1AO15047 1707 aaKnown RBP16.71■□□□□ 0.27
CHEK1-212ENST00000531607 PHLPP1O60346 1717 aa16.71■□□□□ 0.27
CHEK1-212ENST00000531607 LTKP29376 864 aa16.71■□□□□ 0.27
CHEK1-212ENST00000531607 ADGRB3O60242 1522 aa16.7■□□□□ 0.26
CHEK1-212ENST00000531607 NWD1Q149M9 1564 aa16.7■□□□□ 0.26
CHEK1-212ENST00000531607 KANK4Q5T7N3 995 aaPredicted RBP16.7■□□□□ 0.26
CHEK1-212ENST00000531607 EID1Q9Y6B2 187 aa16.7■□□□□ 0.26
CHEK1-212ENST00000531607 ABCC5O15440 1437 aa16.69■□□□□ 0.26
CHEK1-212ENST00000531607 CHD2O14647 1828 aaKnown RBP16.68■□□□□ 0.26
CHEK1-212ENST00000531607 KANK1Q14678 1352 aa16.68■□□□□ 0.26
CHEK1-212ENST00000531607 TMEM2Q9UHN6 1383 aa16.68■□□□□ 0.26
CHEK1-212ENST00000531607 LMTK2Q8IWU2 1503 aa16.68■□□□□ 0.26
CHEK1-212ENST00000531607 DAPK1P53355 1430 aa16.68■□□□□ 0.26
CHEK1-212ENST00000531607 TET3O43151 1660 aa16.67■□□□□ 0.26
CHEK1-212ENST00000531607 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.67■□□□□ 0.26
CHEK1-212ENST00000531607 STAG3Q9UJ98 1225 aa16.67■□□□□ 0.26
CHEK1-212ENST00000531607 RRP7BPQ9NSQ0 103 aa16.66■□□□□ 0.26
CHEK1-212ENST00000531607 NKTRP30414 1462 aaKnown RBP16.66■□□□□ 0.26
CHEK1-212ENST00000531607 TMEM94Q12767 1356 aa16.64■□□□□ 0.26
CHEK1-212ENST00000531607 FAM135BQ49AJ0 1406 aa16.64■□□□□ 0.25
CHEK1-212ENST00000531607 RGS17Q9UGC6 210 aaPredicted RBP16.63■□□□□ 0.25
CHEK1-212ENST00000531607 FGD6Q6ZV73 1430 aa16.62■□□□□ 0.25
CHEK1-212ENST00000531607 ANKRD30AQ9BXX3 1397 aa16.6■□□□□ 0.25
CHEK1-212ENST00000531607 NOS1P29475 1434 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms