RNA–Protein interactions for RNA: ENST00000531550.1

SCN4B-205, Transcript of sodium voltage-gated channel beta subunit 4, humanhuman

TSL 1 (best)

Gene SCN4B, Length 1,206 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4B-205ENST00000531550 NEURL4Q96JN8 1562 aa29.05■■■□□ 2.24
SCN4B-205ENST00000531550 KDM5DQ9BY66 1539 aa29.04■■■□□ 2.24
SCN4B-205ENST00000531550 FAM135AQ9P2D6 1515 aa29.04■■■□□ 2.24
SCN4B-205ENST00000531550 TNRQ92752 1358 aa29.04■■■□□ 2.24
SCN4B-205ENST00000531550 PZPP20742 1482 aa29.04■■■□□ 2.24
SCN4B-205ENST00000531550 CCDC141Q6ZP82 1450 aa29.04■■■□□ 2.24
SCN4B-205ENST00000531550 CAMSAP2Q08AD1 1489 aa29■■■□□ 2.23
SCN4B-205ENST00000531550 KIF3BO15066 747 aa29■■■□□ 2.23
SCN4B-205ENST00000531550 FBXO31Q5XUX0 539 aaPredicted RBP29■■■□□ 2.23
SCN4B-205ENST00000531550 CPS1P31327 1500 aa28.99■■■□□ 2.23
SCN4B-205ENST00000531550 NCOA2Q15596 1464 aa28.96■■■□□ 2.23
SCN4B-205ENST00000531550 SHANK2Q9UPX8 1470 aa28.96■■■□□ 2.23
SCN4B-205ENST00000531550 WASHC2CQ9Y4E1 1318 aa28.93■■■□□ 2.22
SCN4B-205ENST00000531550 SCAF1Q9H7N4 1312 aaKnown RBP28.92■■■□□ 2.22
SCN4B-205ENST00000531550 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.91■■■□□ 2.22
SCN4B-205ENST00000531550 VWDEQ8N2E2 1590 aa28.91■■■□□ 2.22
SCN4B-205ENST00000531550 NLRP1Q9C000 1473 aa28.91■■■□□ 2.22
SCN4B-205ENST00000531550 HSPA1LP34931 641 aa28.9■■■□□ 2.22
SCN4B-205ENST00000531550 PIP4K2BP78356 416 aa28.9■■■□□ 2.22
SCN4B-205ENST00000531550 ARHGEF5Q12774 1597 aa28.9■■■□□ 2.22
SCN4B-205ENST00000531550 MED1Q15648 1581 aaPredicted RBP28.9■■■□□ 2.22
SCN4B-205ENST00000531550 RSPH4AQ5TD94 716 aa28.9■■■□□ 2.22
SCN4B-205ENST00000531550 MIA2Q96PC5 1412 aa28.9■■■□□ 2.22
SCN4B-205ENST00000531550 UGGT1Q9NYU2 1555 aa28.89■■■□□ 2.22
SCN4B-205ENST00000531550 DEPDC5O75140 1603 aa28.88■■■□□ 2.21
SCN4B-205ENST00000531550 TOM1O60784 492 aa28.88■■■□□ 2.21
SCN4B-205ENST00000531550 ANKLE2Q86XL3 938 aa28.88■■■□□ 2.21
SCN4B-205ENST00000531550 MED14O60244 1454 aa28.86■■■□□ 2.21
SCN4B-205ENST00000531550 THEMISQ8N1K5 641 aaPredicted RBP28.85■■■□□ 2.21
SCN4B-205ENST00000531550 NPHP4O75161 1426 aaPredicted RBP28.85■■■□□ 2.21
SCN4B-205ENST00000531550 RNF17Q9BXT8 1623 aaKnown RBP28.83■■■□□ 2.21
SCN4B-205ENST00000531550 IQGAP1P46940 1657 aa28.82■■■□□ 2.2
SCN4B-205ENST00000531550 ZC3H13Q5T200 1668 aaKnown RBP28.81■■■□□ 2.2
SCN4B-205ENST00000531550 ALKQ9UM73 1620 aa28.81■■■□□ 2.2
SCN4B-205ENST00000531550 ABCC3O15438 1527 aa28.79■■■□□ 2.2
SCN4B-205ENST00000531550 TSPY4P0CV99 314 aa28.79■■■□□ 2.2
SCN4B-205ENST00000531550 TSPY10P0CW01 314 aa28.79■■■□□ 2.2
SCN4B-205ENST00000531550 MAST1Q9Y2H9 1570 aa28.78■■■□□ 2.2
SCN4B-205ENST00000531550 EIF2AK4Q9P2K8 1649 aaKnown RBP28.76■■■□□ 2.19
SCN4B-205ENST00000531550 STRCP1A6NGW2 1772 aa28.75■■■□□ 2.19
SCN4B-205ENST00000531550 ERVK-7P63135 1459 aa28.73■■■□□ 2.19
SCN4B-205ENST00000531550 MROH1Q8NDA8 1641 aa28.72■■■□□ 2.19
SCN4B-205ENST00000531550 LRRC9Q6ZRR7 1453 aa28.72■■■□□ 2.19
SCN4B-205ENST00000531550 SYNMO15061 1565 aa28.71■■■□□ 2.19
SCN4B-205ENST00000531550 LRRC7Q96NW7 1537 aa28.69■■■□□ 2.18
SCN4B-205ENST00000531550 CEP152O94986 1710 aa28.69■■■□□ 2.18
SCN4B-205ENST00000531550 UBR1Q8IWV7 1749 aa28.67■■■□□ 2.18
SCN4B-205ENST00000531550 VPS8Q8N3P4 1428 aa28.63■■■□□ 2.17
SCN4B-205ENST00000531550 PHF23Q9BUL5 403 aaPredicted RBP28.62■■■□□ 2.17
SCN4B-205ENST00000531550 SCAF11Q99590 1463 aaKnown RBP28.61■■■□□ 2.17
SCN4B-205ENST00000531550 DUOX2Q9NRD8 1548 aa28.61■■■□□ 2.17
SCN4B-205ENST00000531550 MYOM3Q5VTT5 1437 aa28.59■■■□□ 2.17
SCN4B-205ENST00000531550 CFAP65Q6ZU64 1925 aaKnown RBP28.58■■■□□ 2.17
SCN4B-205ENST00000531550 SENP3Q9H4L4 574 aaPredicted RBP28.57■■■□□ 2.16
SCN4B-205ENST00000531550 ARHGAP23Q9P227 1491 aa28.57■■■□□ 2.16
SCN4B-205ENST00000531550 SLIT1O75093 1534 aa28.57■■■□□ 2.16
SCN4B-205ENST00000531550 PRDM15P57071 1507 aaPredicted RBP28.56■■■□□ 2.16
SCN4B-205ENST00000531550 MAP3K1Q13233 1512 aa28.56■■■□□ 2.16
SCN4B-205ENST00000531550 KANK4Q5T7N3 995 aaPredicted RBP28.55■■■□□ 2.16
SCN4B-205ENST00000531550 ARHGAP31Q2M1Z3 1444 aa28.53■■■□□ 2.16
SCN4B-205ENST00000531550 LTKP29376 864 aa28.52■■■□□ 2.16
SCN4B-205ENST00000531550 CROCC2H7BZ55 1655 aa28.51■■■□□ 2.16
SCN4B-205ENST00000531550 XIRP1Q702N8 1843 aaKnown RBP28.5■■■□□ 2.15
SCN4B-205ENST00000531550 ERBINQ96RT1 1412 aa28.5■■■□□ 2.15
SCN4B-205ENST00000531550 KIF15Q9NS87 1388 aa28.5■■■□□ 2.15
SCN4B-205ENST00000531550 TXNDC2Q86VQ3 553 aa28.49■■■□□ 2.15
SCN4B-205ENST00000531550 PIK3C2BO00750 1634 aa28.48■■■□□ 2.15
SCN4B-205ENST00000531550 ABCC5O15440 1437 aa28.44■■■□□ 2.14
SCN4B-205ENST00000531550 EID1Q9Y6B2 187 aa28.43■■■□□ 2.14
SCN4B-205ENST00000531550 TMEM2Q9UHN6 1383 aa28.41■■■□□ 2.14
SCN4B-205ENST00000531550 PTPN23Q9H3S7 1636 aa28.41■■■□□ 2.14
SCN4B-205ENST00000531550 RRP7BPQ9NSQ0 103 aa28.41■■■□□ 2.14
SCN4B-205ENST00000531550 KDM5AP29375 1690 aaKnown RBP28.39■■■□□ 2.14
SCN4B-205ENST00000531550 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.39■■■□□ 2.14
SCN4B-205ENST00000531550 LOC105371045A0A1W2PR82 267 aa28.38■■■□□ 2.13
SCN4B-205ENST00000531550 EFCAB6Q5THR3 1501 aa28.38■■■□□ 2.13
SCN4B-205ENST00000531550 DAPK1P53355 1430 aa28.37■■■□□ 2.13
SCN4B-205ENST00000531550 KANK1Q14678 1352 aa28.37■■■□□ 2.13
SCN4B-205ENST00000531550 RGS17Q9UGC6 210 aaPredicted RBP28.36■■■□□ 2.13
SCN4B-205ENST00000531550 LMTK2Q8IWU2 1503 aa28.36■■■□□ 2.13
SCN4B-205ENST00000531550 STAG3Q9UJ98 1225 aa28.35■■■□□ 2.13
SCN4B-205ENST00000531550 FAM135BQ49AJ0 1406 aa28.35■■■□□ 2.13
SCN4B-205ENST00000531550 TMEM94Q12767 1356 aa28.33■■■□□ 2.13
SCN4B-205ENST00000531550 TET3O43151 1660 aa28.31■■■□□ 2.12
SCN4B-205ENST00000531550 IDI1Q13907 227 aa28.3■■■□□ 2.12
SCN4B-205ENST00000531550 ROBO1Q9Y6N7 1651 aa28.29■■■□□ 2.12
SCN4B-205ENST00000531550 ADGRB3O60242 1522 aa28.28■■■□□ 2.12
SCN4B-205ENST00000531550 FGD6Q6ZV73 1430 aa28.28■■■□□ 2.12
SCN4B-205ENST00000531550 KCNA6P17658 529 aa28.28■■■□□ 2.12
SCN4B-205ENST00000531550 NOS1P29475 1434 aa28.26■■■□□ 2.12
SCN4B-205ENST00000531550 ANKRD30AQ9BXX3 1397 aa28.26■■■□□ 2.12
SCN4B-205ENST00000531550 NWD1Q149M9 1564 aa28.26■■■□□ 2.11
SCN4B-205ENST00000531550 NKTRP30414 1462 aaKnown RBP28.24■■■□□ 2.11
SCN4B-205ENST00000531550 SLC26A8Q96RN1 970 aa28.24■■■□□ 2.11
SCN4B-205ENST00000531550 CHIC2Q9UKJ5 165 aa28.23■■■□□ 2.11
SCN4B-205ENST00000531550 PROSER2Q86WR7 435 aaPredicted RBP28.22■■■□□ 2.11
SCN4B-205ENST00000531550 RBM33Q96EV2 1170 aaKnown RBP28.21■■■□□ 2.11
SCN4B-205ENST00000531550 APLP2Q06481 763 aa28.19■■■□□ 2.1
SCN4B-205ENST00000531550 POTEAQ6S8J7 498 aa28.17■■■□□ 2.1
SCN4B-205ENST00000531550 ADGRL2O95490 1459 aa28.16■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms