RNA–Protein interactions for RNA: ENST00000531468.1

NECTIN1-206, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 3

Gene NECTIN1, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-206ENST00000531468 PCDHGA10Q9Y5H3 936 aa6.98□□□□□ -1.29
NECTIN1-206ENST00000531468 DDX12PQ92771 950 aa6.97□□□□□ -1.29
NECTIN1-206ENST00000531468 ZDHHC16Q969W1 377 aa6.97□□□□□ -1.29
NECTIN1-206ENST00000531468 BCL2L12Q9HB09 334 aa6.97□□□□□ -1.29
NECTIN1-206ENST00000531468 ARHGAP33O14559 1287 aa6.96□□□□□ -1.3
NECTIN1-206ENST00000531468 TYW1BQ6NUM6 668 aa6.96□□□□□ -1.3
NECTIN1-206ENST00000531468 FBXW7Q969H0 707 aa6.96□□□□□ -1.3
NECTIN1-206ENST00000531468 EPAS1Q99814 870 aa6.96□□□□□ -1.3
NECTIN1-206ENST00000531468 ADAM33Q9BZ11 813 aa6.96□□□□□ -1.3
NECTIN1-206ENST00000531468 AXIN2Q9Y2T1 843 aa6.96□□□□□ -1.3
NECTIN1-206ENST00000531468 HMGXB3Q12766 1538 aa6.96□□□□□ -1.3
NECTIN1-206ENST00000531468 LSM11P83369 360 aaKnown RBP eCLIP6.95□□□□□ -1.3
NECTIN1-206ENST00000531468 ATAD2BQ9ULI0 1458 aa6.95□□□□□ -1.3
NECTIN1-206ENST00000531468 NBR1Q14596 966 aa6.94□□□□□ -1.3
NECTIN1-206ENST00000531468 KCNK17Q96T54 332 aa6.94□□□□□ -1.3
NECTIN1-206ENST00000531468 PSEN2P49810 448 aa6.93□□□□□ -1.3
NECTIN1-206ENST00000531468 SMARCA2P51531 1590 aa6.92□□□□□ -1.3
NECTIN1-206ENST00000531468 LAMC3Q9Y6N6 1575 aa6.92□□□□□ -1.3
NECTIN1-206ENST00000531468 PTPREP23469 700 aa6.92□□□□□ -1.3
NECTIN1-206ENST00000531468 EN1Q05925 392 aaPredicted RBP6.92□□□□□ -1.3
NECTIN1-206ENST00000531468 KCNH8Q96L42 1107 aa6.92□□□□□ -1.3
NECTIN1-206ENST00000531468 GRXCR2A6NFK2 248 aa6.91□□□□□ -1.3
NECTIN1-206ENST00000531468 DMRTA1Q5VZB9 504 aa6.91□□□□□ -1.3
NECTIN1-206ENST00000531468 SEMA3EO15041 775 aa6.9□□□□□ -1.3
NECTIN1-206ENST00000531468 OSBPP22059 807 aa6.9□□□□□ -1.3
NECTIN1-206ENST00000531468 MLLT3P42568 568 aaPredicted RBP6.9□□□□□ -1.3
NECTIN1-206ENST00000531468 PRIM1P49642 420 aaKnown RBP6.9□□□□□ -1.3
NECTIN1-206ENST00000531468 SPNS2Q8IVW8 549 aa6.9□□□□□ -1.3
NECTIN1-206ENST00000531468 RBM33Q96EV2 1170 aaKnown RBP6.9□□□□□ -1.3
NECTIN1-206ENST00000531468 PPP1R3GB7ZBB8 358 aa6.89□□□□□ -1.31
NECTIN1-206ENST00000531468 TK2O00142 265 aa6.89□□□□□ -1.31
NECTIN1-206ENST00000531468 MAP3K7O43318 606 aa6.89□□□□□ -1.31
NECTIN1-206ENST00000531468 C6orf132Q5T0Z8 1188 aa6.89□□□□□ -1.31
NECTIN1-206ENST00000531468 ANKRD13DQ6ZTN6 518 aa6.89□□□□□ -1.31
NECTIN1-206ENST00000531468 KIF21AQ7Z4S6 1674 aa6.89□□□□□ -1.31
NECTIN1-206ENST00000531468 PDS5BQ9NTI5 1447 aa6.88□□□□□ -1.31
NECTIN1-206ENST00000531468 TESPA1A2RU30 521 aaPredicted RBP6.88□□□□□ -1.31
NECTIN1-206ENST00000531468 ADGRD1Q6QNK2 874 aa6.88□□□□□ -1.31
NECTIN1-206ENST00000531468 SLC24A1O60721 1099 aa6.87□□□□□ -1.31
NECTIN1-206ENST00000531468 COL9A1P20849 921 aa6.87□□□□□ -1.31
NECTIN1-206ENST00000531468 TSR1Q2NL82 804 aaKnown RBP6.87□□□□□ -1.31
NECTIN1-206ENST00000531468 ZBED2Q9BTP6 218 aa6.87□□□□□ -1.31
NECTIN1-206ENST00000531468 SLC4A5Q9BY07 1137 aa6.87□□□□□ -1.31
NECTIN1-206ENST00000531468 SMARCA4P51532 1647 aa6.87□□□□□ -1.31
NECTIN1-206ENST00000531468 BAZ1AQ9NRL2 1556 aaPredicted RBP6.86□□□□□ -1.31
NECTIN1-206ENST00000531468 VPS9D1Q9Y2B5 631 aa6.86□□□□□ -1.31
NECTIN1-206ENST00000531468 BAZ1BQ9UIG0 1483 aaKnown RBP6.85□□□□□ -1.31
NECTIN1-206ENST00000531468 PLSCR2Q9NRY7 297 aa6.85□□□□□ -1.31
NECTIN1-206ENST00000531468 MMRN1Q13201 1228 aa6.84□□□□□ -1.31
NECTIN1-206ENST00000531468 CDHR5Q9HBB8 845 aa6.84□□□□□ -1.31
NECTIN1-206ENST00000531468 WDR62O43379 1518 aa6.84□□□□□ -1.31
NECTIN1-206ENST00000531468 MRC2Q9UBG0 1479 aa6.84□□□□□ -1.31
NECTIN1-206ENST00000531468 PEG3Q9GZU2 1588 aa6.83□□□□□ -1.32
NECTIN1-206ENST00000531468 HRO43593 1189 aa6.83□□□□□ -1.32
NECTIN1-206ENST00000531468 PROX2Q3B8N5 592 aa6.83□□□□□ -1.32
NECTIN1-206ENST00000531468 CERKQ8TCT0 537 aa6.82□□□□□ -1.32
NECTIN1-206ENST00000531468 MYT1LQ9UL68 1186 aa6.82□□□□□ -1.32
NECTIN1-206ENST00000531468 SMYD5Q6GMV2 418 aa6.81□□□□□ -1.32
NECTIN1-206ENST00000531468 RIMBP3CA6NJZ7 1639 aa6.8□□□□□ -1.32
NECTIN1-206ENST00000531468 RIMBP3BA6NNM3 1639 aa6.8□□□□□ -1.32
NECTIN1-206ENST00000531468 RIMBP3Q9UFD9 1639 aa6.8□□□□□ -1.32
NECTIN1-206ENST00000531468 TRIM6-TRIM34B2RNG4 842 aa6.8□□□□□ -1.32
NECTIN1-206ENST00000531468 BHMG1C9JSJ3 638 aaPredicted RBP6.8□□□□□ -1.32
NECTIN1-206ENST00000531468 RABGEF1Q9UJ41 708 aa6.8□□□□□ -1.32
NECTIN1-206ENST00000531468 CADPSQ9ULU8 1353 aa6.8□□□□□ -1.32
NECTIN1-206ENST00000531468 ONECUT3O60422 494 aaPredicted RBP6.79□□□□□ -1.32
NECTIN1-206ENST00000531468 RNF166Q96A37 237 aaPredicted RBP6.79□□□□□ -1.32
NECTIN1-206ENST00000531468 CDCA7LQ96GN5 454 aa6.79□□□□□ -1.32
NECTIN1-206ENST00000531468 NBPF3Q9H094 633 aa6.79□□□□□ -1.32
NECTIN1-206ENST00000531468 NPDC1Q9NQX5 325 aaPredicted RBP6.79□□□□□ -1.32
NECTIN1-206ENST00000531468 RBM27Q9P2N5 1060 aaKnown RBP6.79□□□□□ -1.32
NECTIN1-206ENST00000531468 PRSS12P56730 875 aa6.78□□□□□ -1.32
NECTIN1-206ENST00000531468 PTGDRQ13258 359 aa6.78□□□□□ -1.32
NECTIN1-206ENST00000531468 RBM26Q5T8P6 1007 aaKnown RBP6.78□□□□□ -1.32
NECTIN1-206ENST00000531468 KIAA1468Q9P260 1216 aa6.78□□□□□ -1.32
NECTIN1-206ENST00000531468 TSKSQ9UJT2 592 aa6.78□□□□□ -1.32
NECTIN1-206ENST00000531468 NUTM2FA1L443 756 aa6.77□□□□□ -1.33
NECTIN1-206ENST00000531468 TULP1O00294 542 aaPredicted RBP6.76□□□□□ -1.33
NECTIN1-206ENST00000531468 TTC13Q8NBP0 860 aa6.76□□□□□ -1.33
NECTIN1-206ENST00000531468 STAC3Q96MF2 364 aa6.76□□□□□ -1.33
NECTIN1-206ENST00000531468 FAM198AQ9UFP1 575 aa6.76□□□□□ -1.33
NECTIN1-206ENST00000531468 GPR37O15354 613 aa6.75□□□□□ -1.33
NECTIN1-206ENST00000531468 FCHSD2O94868 740 aa6.75□□□□□ -1.33
NECTIN1-206ENST00000531468 PADI6Q6TGC4 694 aa6.75□□□□□ -1.33
NECTIN1-206ENST00000531468 LAPTM4BQ86VI4 370 aa6.75□□□□□ -1.33
NECTIN1-206ENST00000531468 PACS2Q86VP3 889 aa6.75□□□□□ -1.33
NECTIN1-206ENST00000531468 MRPL50Q8N5N7 158 aaKnown RBP6.75□□□□□ -1.33
NECTIN1-206ENST00000531468 ARHGEF11O15085 1522 aa6.75□□□□□ -1.33
NECTIN1-206ENST00000531468 CEP164Q9UPV0 1460 aa6.74□□□□□ -1.33
NECTIN1-206ENST00000531468 SEPT9Q9UHD8 586 aaPredicted RBP6.74□□□□□ -1.33
NECTIN1-206ENST00000531468 NBPF26B4DH59 902 aa6.73□□□□□ -1.33
NECTIN1-206ENST00000531468 C3orf80F5H4A9 247 aa6.73□□□□□ -1.33
NECTIN1-206ENST00000531468 GPIHBP1Q8IV16 184 aa6.73□□□□□ -1.33
NECTIN1-206ENST00000531468 HIC1Q14526 733 aa6.72□□□□□ -1.33
NECTIN1-206ENST00000531468 FAM98CQ17RN3 349 aaKnown RBP6.72□□□□□ -1.33
NECTIN1-206ENST00000531468 KCTD12Q96CX2 325 aaKnown RBP6.72□□□□□ -1.33
NECTIN1-206ENST00000531468 GOLGA8CPA6NN73 597 aa6.71□□□□□ -1.34
NECTIN1-206ENST00000531468 TATDN2Q93075 761 aa6.71□□□□□ -1.34
NECTIN1-206ENST00000531468 PNMA3Q9UL41 463 aa6.71□□□□□ -1.34
NECTIN1-206ENST00000531468 FANCD2Q9BXW9 1451 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms