RNA–Protein interactions for RNA: ENST00000531413.5

CFL1-212, Transcript of cofilin 1, humanhuman

TSL 3 BASIC

Gene CFL1, Length 636 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Lamellipodium, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFL1-212ENST00000531413 INO80Q9ULG1 1556 aaPredicted RBP26.46■■□□□ 1.83
CFL1-212ENST00000531413 TNRQ92752 1358 aa26.44■■□□□ 1.82
CFL1-212ENST00000531413 SRCAPQ6ZRS2 3230 aa26.41■■□□□ 1.82
CFL1-212ENST00000531413 FBXO31Q5XUX0 539 aaPredicted RBP26.4■■□□□ 1.82
CFL1-212ENST00000531413 XIRP1Q702N8 1843 aaKnown RBP26.39■■□□□ 1.82
CFL1-212ENST00000531413 ADGBQ8N7X0 1667 aa26.38■■□□□ 1.81
CFL1-212ENST00000531413 ZNF777Q9ULD5 760 aaPredicted RBP26.37■■□□□ 1.81
CFL1-212ENST00000531413 HNRNPMP52272 730 aaKnown RBP eCLIP26.36■■□□□ 1.813e-7■■■■□ 25.1
CFL1-212ENST00000531413 THEMISQ8N1K5 641 aaPredicted RBP26.35■■□□□ 1.81
CFL1-212ENST00000531413 UGGT1Q9NYU2 1555 aa26.34■■□□□ 1.81
CFL1-212ENST00000531413 UPF1Q92900 1129 aaKnown RBP eCLIP26.34■■□□□ 1.811e-22■■■■■ 27.9
CFL1-212ENST00000531413 ARHGAP35Q9NRY4 1499 aa26.34■■□□□ 1.81
CFL1-212ENST00000531413 PZPP20742 1482 aa26.32■■□□□ 1.8
CFL1-212ENST00000531413 FAM135AQ9P2D6 1515 aa26.31■■□□□ 1.8
CFL1-212ENST00000531413 ZC3H13Q5T200 1668 aaKnown RBP26.31■■□□□ 1.8
CFL1-212ENST00000531413 EEA1Q15075 1411 aa26.3■■□□□ 1.8
CFL1-212ENST00000531413 FAM135BQ49AJ0 1406 aa26.28■■□□□ 1.8
CFL1-212ENST00000531413 NLRP1Q9C000 1473 aa26.28■■□□□ 1.8
CFL1-212ENST00000531413 MIA2Q96PC5 1412 aa26.25■■□□□ 1.79
CFL1-212ENST00000531413 KIAA1107Q9UPP5 1409 aa26.24■■□□□ 1.79
CFL1-212ENST00000531413 GPATCH8Q9UKJ3 1502 aaKnown RBP26.24■■□□□ 1.79
CFL1-212ENST00000531413 ROBO1Q9Y6N7 1651 aa26.23■■□□□ 1.79
CFL1-212ENST00000531413 KDM5DQ9BY66 1539 aa26.23■■□□□ 1.79
CFL1-212ENST00000531413 CCDC18Q5T9S5 1454 aa26.19■■□□□ 1.78
CFL1-212ENST00000531413 PLEKHH2Q8IVE3 1493 aa26.19■■□□□ 1.78
CFL1-212ENST00000531413 DHX29Q7Z478 1369 aaKnown RBP26.12■■□□□ 1.77
CFL1-212ENST00000531413 TRIM52Q96A61 297 aa26.12■■□□□ 1.77
CFL1-212ENST00000531413 KIF3BO15066 747 aa26.1■■□□□ 1.77
CFL1-212ENST00000531413 PHLPP1O60346 1717 aa26.1■■□□□ 1.77
CFL1-212ENST00000531413 WASHC2CQ9Y4E1 1318 aa26.1■■□□□ 1.77
CFL1-212ENST00000531413 CASKIN1Q8WXD9 1431 aa26.09■■□□□ 1.77
CFL1-212ENST00000531413 CFDP1Q9UEE9 299 aaPredicted RBP26.09■■□□□ 1.77
CFL1-212ENST00000531413 EHMT2Q96KQ7 1210 aa26.08■■□□□ 1.77
CFL1-212ENST00000531413 UBR1Q8IWV7 1749 aa26.08■■□□□ 1.76
CFL1-212ENST00000531413 SCAF11Q99590 1463 aaKnown RBP26.07■■□□□ 1.76
CFL1-212ENST00000531413 UBTFP17480 764 aaKnown RBP26.06■■□□□ 1.76
CFL1-212ENST00000531413 CFAP65Q6ZU64 1925 aaKnown RBP26.04■■□□□ 1.76
CFL1-212ENST00000531413 JCADQ9P266 1359 aa26.04■■□□□ 1.76
CFL1-212ENST00000531413 RTEL1-TNFRSF6BF6WH68 1400 aa26.04■■□□□ 1.76
CFL1-212ENST00000531413 LRP6O75581 1613 aa26.03■■□□□ 1.76
CFL1-212ENST00000531413 TMEM94Q12767 1356 aa26.02■■□□□ 1.76
CFL1-212ENST00000531413 MBD5Q9P267 1494 aa26.02■■□□□ 1.76
CFL1-212ENST00000531413 MAP3K1Q13233 1512 aa26.02■■□□□ 1.76
CFL1-212ENST00000531413 LRRC9Q6ZRR7 1453 aa26■■□□□ 1.75
CFL1-212ENST00000531413 ZNF644Q9H582 1327 aaPredicted RBP25.99■■□□□ 1.75
CFL1-212ENST00000531413 LTKP29376 864 aa25.99■■□□□ 1.75
CFL1-212ENST00000531413 CCNB3Q8WWL7 1395 aa25.98■■□□□ 1.75
CFL1-212ENST00000531413 ZNF772Q68DY9 489 aaPredicted RBP25.98■■□□□ 1.75
CFL1-212ENST00000531413 NCOA2Q15596 1464 aa25.97■■□□□ 1.75
CFL1-212ENST00000531413 ARHGAP23Q9P227 1491 aa25.97■■□□□ 1.75
CFL1-212ENST00000531413 COL16A1Q07092 1604 aaPredicted RBP25.96■■□□□ 1.75
CFL1-212ENST00000531413 ERVK-7P63135 1459 aa25.96■■□□□ 1.75
CFL1-212ENST00000531413 SLIT1O75093 1534 aa25.95■■□□□ 1.74
CFL1-212ENST00000531413 TXNDC2Q86VQ3 553 aa25.93■■□□□ 1.74
CFL1-212ENST00000531413 CDK12Q9NYV4 1490 aaPredicted RBP25.92■■□□□ 1.74
CFL1-212ENST00000531413 RBM33Q96EV2 1170 aaKnown RBP25.92■■□□□ 1.74
CFL1-212ENST00000531413 FYCO1Q9BQS8 1478 aa25.91■■□□□ 1.74
CFL1-212ENST00000531413 RXRBP28702 533 aa25.91■■□□□ 1.74
CFL1-212ENST00000531413 MEX3CQ5U5Q3 659 aaKnown RBP25.91■■□□□ 1.74
CFL1-212ENST00000531413 ABCC3O15438 1527 aa25.91■■□□□ 1.74
CFL1-212ENST00000531413 CHIC1Q5VXU3 224 aa25.9■■□□□ 1.74
CFL1-212ENST00000531413 SPATA31A6Q5VVP1 1343 aa25.88■■□□□ 1.73
CFL1-212ENST00000531413 TIAM1Q13009 1591 aa25.87■■□□□ 1.73
CFL1-212ENST00000531413 PROSER2Q86WR7 435 aaPredicted RBP25.86■■□□□ 1.73
CFL1-212ENST00000531413 PRDM15P57071 1507 aaPredicted RBP25.85■■□□□ 1.73
CFL1-212ENST00000531413 SHPRHQ149N8 1683 aa25.84■■□□□ 1.73
CFL1-212ENST00000531413 KCNA6P17658 529 aa25.84■■□□□ 1.73
CFL1-212ENST00000531413 SLAIN2Q9P270 581 aa25.84■■□□□ 1.73
CFL1-212ENST00000531413 CEP152O94986 1710 aa25.83■■□□□ 1.73
CFL1-212ENST00000531413 FGD6Q6ZV73 1430 aa25.83■■□□□ 1.73
CFL1-212ENST00000531413 CCDC141Q6ZP82 1450 aa25.82■■□□□ 1.72
CFL1-212ENST00000531413 EID1Q9Y6B2 187 aa25.81■■□□□ 1.72
CFL1-212ENST00000531413 MSH6P52701 1360 aa25.81■■□□□ 1.72
CFL1-212ENST00000531413 NKTRP30414 1462 aaKnown RBP25.79■■□□□ 1.72
CFL1-212ENST00000531413 NWD1Q149M9 1564 aa25.78■■□□□ 1.72
CFL1-212ENST00000531413 RGS12O14924 1447 aa25.77■■□□□ 1.72
CFL1-212ENST00000531413 SETBP1Q9Y6X0 1596 aa25.77■■□□□ 1.72
CFL1-212ENST00000531413 PIK3C2BO00750 1634 aa25.76■■□□□ 1.71
CFL1-212ENST00000531413 MROH1Q8NDA8 1641 aa25.76■■□□□ 1.71
CFL1-212ENST00000531413 TET3O43151 1660 aa25.76■■□□□ 1.71
CFL1-212ENST00000531413 KDM5AP29375 1690 aaKnown RBP25.75■■□□□ 1.71
CFL1-212ENST00000531413 TMEM2Q9UHN6 1383 aa25.74■■□□□ 1.71
CFL1-212ENST00000531413 CAMSAP2Q08AD1 1489 aa25.73■■□□□ 1.71
CFL1-212ENST00000531413 MTUS2Q5JR59 1369 aa25.73■■□□□ 1.71
CFL1-212ENST00000531413 SLC26A8Q96RN1 970 aa25.73■■□□□ 1.71
CFL1-212ENST00000531413 AHDC1Q5TGY3 1603 aaPredicted RBP25.72■■□□□ 1.71
CFL1-212ENST00000531413 AFF2P51816 1311 aa25.7■■□□□ 1.71
CFL1-212ENST00000531413 ZRANB1Q9UGI0 708 aa25.69■■□□□ 1.7
CFL1-212ENST00000531413 EIF2AK4Q9P2K8 1649 aaKnown RBP25.68■■□□□ 1.7
CFL1-212ENST00000531413 DIP2AQ14689 1571 aa25.66■■□□□ 1.7
CFL1-212ENST00000531413 NUTM2BA6NNL0 878 aaPredicted RBP25.66■■□□□ 1.7
CFL1-212ENST00000531413 NUTM2EB1AL46 878 aaPredicted RBP25.66■■□□□ 1.7
CFL1-212ENST00000531413 NUTM2DQ5VT03 806 aaPredicted RBP25.66■■□□□ 1.7
CFL1-212ENST00000531413 NUTM2AQ8IVF1 878 aaPredicted RBP25.66■■□□□ 1.7
CFL1-212ENST00000531413 CHD2O14647 1828 aaKnown RBP25.65■■□□□ 1.7
CFL1-212ENST00000531413 EFCAB6Q5THR3 1501 aa25.63■■□□□ 1.69
CFL1-212ENST00000531413 ARHGEF5Q12774 1597 aa25.62■■□□□ 1.69
CFL1-212ENST00000531413 RSPH4AQ5TD94 716 aa25.62■■□□□ 1.69
CFL1-212ENST00000531413 RBM6P78332 1123 aaKnown RBP25.61■■□□□ 1.69
CFL1-212ENST00000531413 EHBP1L1Q8N3D4 1523 aa25.61■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms