RNA–Protein interactions for RNA: ENST00000531196.5

FGFR1-236, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 3

Gene FGFR1, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-236ENST00000531196 WASHC2CQ9Y4E1 1318 aa17.08■□□□□ 0.32
FGFR1-236ENST00000531196 CEP170BQ9Y4F5 1589 aaPredicted RBP17.07■□□□□ 0.32
FGFR1-236ENST00000531196 PTPRTO14522 1441 aa17.07■□□□□ 0.32
FGFR1-236ENST00000531196 MAST1Q9Y2H9 1570 aa17.06■□□□□ 0.32
FGFR1-236ENST00000531196 ZNF142P52746 1687 aaPredicted RBP17.06■□□□□ 0.32
FGFR1-236ENST00000531196 TNRQ92752 1358 aa17.03■□□□□ 0.32
FGFR1-236ENST00000531196 PZPP20742 1482 aa17.03■□□□□ 0.32
FGFR1-236ENST00000531196 PLA2R1Q13018 1463 aa17.02■□□□□ 0.32
FGFR1-236ENST00000531196 PTPN23Q9H3S7 1636 aa17.02■□□□□ 0.31
FGFR1-236ENST00000531196 NCKAP5LQ9HCH0 1330 aa17.01■□□□□ 0.31
FGFR1-236ENST00000531196 A2ML1A8K2U0 1454 aa17.01■□□□□ 0.31
FGFR1-236ENST00000531196 SHANK2Q9UPX8 1470 aa17■□□□□ 0.31
FGFR1-236ENST00000531196 RNF17Q9BXT8 1623 aaKnown RBP17■□□□□ 0.31
FGFR1-236ENST00000531196 EIF2AK4Q9P2K8 1649 aaKnown RBP17■□□□□ 0.31
FGFR1-236ENST00000531196 FBXO31Q5XUX0 539 aaPredicted RBP17■□□□□ 0.31
FGFR1-236ENST00000531196 FGD6Q6ZV73 1430 aa17■□□□□ 0.31
FGFR1-236ENST00000531196 PKD2Q13563 968 aa16.99■□□□□ 0.31
FGFR1-236ENST00000531196 DUOX2Q9NRD8 1548 aa16.99■□□□□ 0.31
FGFR1-236ENST00000531196 KIF15Q9NS87 1388 aa16.99■□□□□ 0.31
FGFR1-236ENST00000531196 CROCC2H7BZ55 1655 aa16.97■□□□□ 0.31
FGFR1-236ENST00000531196 ZC3H13Q5T200 1668 aaKnown RBP16.97■□□□□ 0.31
FGFR1-236ENST00000531196 ABCC5O15440 1437 aa16.97■□□□□ 0.31
FGFR1-236ENST00000531196 ABCC3O15438 1527 aa16.97■□□□□ 0.31
FGFR1-236ENST00000531196 DAPK1P53355 1430 aa16.96■□□□□ 0.31
FGFR1-236ENST00000531196 TCOF1Q13428 1488 aaKnown RBP16.96■□□□□ 0.31
FGFR1-236ENST00000531196 DNMT1P26358 1616 aaKnown RBP16.96■□□□□ 0.3
FGFR1-236ENST00000531196 RRP7BPQ9NSQ0 103 aa16.95■□□□□ 0.3
FGFR1-236ENST00000531196 ERBINQ96RT1 1412 aa16.95■□□□□ 0.3
FGFR1-236ENST00000531196 NLRP1Q9C000 1473 aa16.94■□□□□ 0.3
FGFR1-236ENST00000531196 LTBP4Q8N2S1 1624 aa16.93■□□□□ 0.3
FGFR1-236ENST00000531196 MROH1Q8NDA8 1641 aa16.92■□□□□ 0.3
FGFR1-236ENST00000531196 ANKRD30AQ9BXX3 1397 aa16.92■□□□□ 0.3
FGFR1-236ENST00000531196 ZNF335Q9H4Z2 1342 aaPredicted RBP16.92■□□□□ 0.3
FGFR1-236ENST00000531196 UGGT1Q9NYU2 1555 aa16.91■□□□□ 0.3
FGFR1-236ENST00000531196 FAM50AQ14320 339 aaKnown RBP16.91■□□□□ 0.3
FGFR1-236ENST00000531196 CHIC2Q9UKJ5 165 aa16.91■□□□□ 0.3
FGFR1-236ENST00000531196 CEP152O94986 1710 aa16.9■□□□□ 0.3
FGFR1-236ENST00000531196 THEMISQ8N1K5 641 aaPredicted RBP16.9■□□□□ 0.3
FGFR1-236ENST00000531196 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.9■□□□□ 0.33e-9■■■■■ 29.8
FGFR1-236ENST00000531196 ERVK-7P63135 1459 aa16.9■□□□□ 0.3
FGFR1-236ENST00000531196 PRDM15P57071 1507 aaPredicted RBP16.9■□□□□ 0.3
FGFR1-236ENST00000531196 KANK1Q14678 1352 aa16.89■□□□□ 0.3
FGFR1-236ENST00000531196 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.89■□□□□ 0.3
FGFR1-236ENST00000531196 IQSEC2Q5JU85 1478 aa16.89■□□□□ 0.29
FGFR1-236ENST00000531196 POLR1AO95602 1720 aaPredicted RBP16.89■□□□□ 0.29
FGFR1-236ENST00000531196 SPATA31D1Q6ZQQ2 1576 aa16.89■□□□□ 0.29
FGFR1-236ENST00000531196 ANKLE2Q86XL3 938 aa16.88■□□□□ 0.29
FGFR1-236ENST00000531196 NEURL4Q96JN8 1562 aa16.85■□□□□ 0.29
FGFR1-236ENST00000531196 DEPDC5O75140 1603 aa16.84■□□□□ 0.29
FGFR1-236ENST00000531196 NPHP4O75161 1426 aaPredicted RBP16.83■□□□□ 0.28
FGFR1-236ENST00000531196 ADGRL2O95490 1459 aa16.82■□□□□ 0.28
FGFR1-236ENST00000531196 ARHGAP31Q2M1Z3 1444 aa16.82■□□□□ 0.28
FGFR1-236ENST00000531196 UBAP1LF5GYI3 381 aa16.81■□□□□ 0.28
FGFR1-236ENST00000531196 CFAP65Q6ZU64 1925 aaKnown RBP16.79■□□□□ 0.28
FGFR1-236ENST00000531196 STAG3Q9UJ98 1225 aa16.79■□□□□ 0.28
FGFR1-236ENST00000531196 CPS1P31327 1500 aa16.79■□□□□ 0.28
FGFR1-236ENST00000531196 ANKRD50Q9ULJ7 1429 aa16.79■□□□□ 0.28
FGFR1-236ENST00000531196 MED14O60244 1454 aa16.78■□□□□ 0.28
FGFR1-236ENST00000531196 IQGAP1P46940 1657 aa16.78■□□□□ 0.28
FGFR1-236ENST00000531196 LMTK2Q8IWU2 1503 aa16.77■□□□□ 0.28
FGFR1-236ENST00000531196 UBR1Q8IWV7 1749 aa16.77■□□□□ 0.28
FGFR1-236ENST00000531196 SCAF11Q99590 1463 aaKnown RBP16.76■□□□□ 0.27
FGFR1-236ENST00000531196 VWDEQ8N2E2 1590 aa16.76■□□□□ 0.27
FGFR1-236ENST00000531196 EFCAB6Q5THR3 1501 aa16.75■□□□□ 0.27
FGFR1-236ENST00000531196 SCAF1Q9H7N4 1312 aaKnown RBP16.74■□□□□ 0.27
FGFR1-236ENST00000531196 PPARGC1BQ86YN6 1023 aaKnown RBP16.74■□□□□ 0.27
FGFR1-236ENST00000531196 EID1Q9Y6B2 187 aa16.74■□□□□ 0.27
FGFR1-236ENST00000531196 PIK3C2BO00750 1634 aa16.73■□□□□ 0.27
FGFR1-236ENST00000531196 ITGAEP38570 1179 aa16.72■□□□□ 0.27
FGFR1-236ENST00000531196 TXNDC2Q86VQ3 553 aa16.72■□□□□ 0.27
FGFR1-236ENST00000531196 SLIT1O75093 1534 aa16.71■□□□□ 0.27
FGFR1-236ENST00000531196 DISP3Q9P2K9 1392 aa16.71■□□□□ 0.27
FGFR1-236ENST00000531196 ARHGAP23Q9P227 1491 aa16.71■□□□□ 0.27
FGFR1-236ENST00000531196 TOM1O60784 492 aa16.7■□□□□ 0.26
FGFR1-236ENST00000531196 SYNMO15061 1565 aa16.69■□□□□ 0.26
FGFR1-236ENST00000531196 ROCK1Q13464 1354 aa16.69■□□□□ 0.26
FGFR1-236ENST00000531196 TMEM2Q9UHN6 1383 aa16.69■□□□□ 0.26
FGFR1-236ENST00000531196 PIP4K2BP78356 416 aa16.69■□□□□ 0.26
FGFR1-236ENST00000531196 RPRD2Q5VT52 1461 aaKnown RBP16.68■□□□□ 0.26
FGFR1-236ENST00000531196 LTKP29376 864 aa16.68■□□□□ 0.26
FGFR1-236ENST00000531196 IDI1Q13907 227 aa16.68■□□□□ 0.26
FGFR1-236ENST00000531196 NOS1P29475 1434 aa16.68■□□□□ 0.26
FGFR1-236ENST00000531196 ADGRB3O60242 1522 aa16.67■□□□□ 0.26
FGFR1-236ENST00000531196 TET3O43151 1660 aa16.67■□□□□ 0.26
FGFR1-236ENST00000531196 UNC13BO14795 1591 aa16.67■□□□□ 0.26
FGFR1-236ENST00000531196 SLC52A1Q9NWF4 448 aa16.66■□□□□ 0.26
FGFR1-236ENST00000531196 KDM5AP29375 1690 aaKnown RBP16.65■□□□□ 0.26
FGFR1-236ENST00000531196 BCANQ96GW7 911 aa16.64■□□□□ 0.25
FGFR1-236ENST00000531196 LRRC7Q96NW7 1537 aa16.64■□□□□ 0.25
FGFR1-236ENST00000531196 GCC2Q8IWJ2 1684 aa16.63■□□□□ 0.25
FGFR1-236ENST00000531196 STRCP1A6NGW2 1772 aa16.61■□□□□ 0.25
FGFR1-236ENST00000531196 PPP1R15AO75807 674 aaPredicted RBP16.61■□□□□ 0.25
FGFR1-236ENST00000531196 CHGAP10645 457 aaKnown RBP16.61■□□□□ 0.25
FGFR1-236ENST00000531196 NUP155O75694 1391 aa16.61■□□□□ 0.25
FGFR1-236ENST00000531196 IQGAP3Q86VI3 1631 aa16.59■□□□□ 0.25
FGFR1-236ENST00000531196 HSPA1LP34931 641 aa16.59■□□□□ 0.25
FGFR1-236ENST00000531196 SLC26A8Q96RN1 970 aa16.59■□□□□ 0.25
FGFR1-236ENST00000531196 SENP3Q9H4L4 574 aaPredicted RBP16.58■□□□□ 0.24
FGFR1-236ENST00000531196 E9PCH4 1651 aa16.57■□□□□ 0.24
FGFR1-236ENST00000531196 HDGFP51858 240 aaKnown RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms