RNA–Protein interactions for RNA: ENST00000531007.1

CTNND1-228, Transcript of catenin delta 1, humanhuman

TSL 4

Gene CTNND1, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-228ENST00000531007 ABCC1P33527 1531 aa14.62□□□□□ -0.07
CTNND1-228ENST00000531007 ADGBQ8N7X0 1667 aa14.62□□□□□ -0.07
CTNND1-228ENST00000531007 MAST1Q9Y2H9 1570 aa14.61□□□□□ -0.07
CTNND1-228ENST00000531007 NAIPQ13075 1403 aa14.61□□□□□ -0.07
CTNND1-228ENST00000531007 GCC2Q8IWJ2 1684 aa14.61□□□□□ -0.07
CTNND1-228ENST00000531007 RAB3GAP2Q9H2M9 1393 aa14.6□□□□□ -0.07
CTNND1-228ENST00000531007 FKBP8Q14318 412 aa14.6□□□□□ -0.07
CTNND1-228ENST00000531007 NEO1Q92859 1461 aa14.6□□□□□ -0.07
CTNND1-228ENST00000531007 MAP3K4Q9Y6R4 1608 aa14.59□□□□□ -0.07
CTNND1-228ENST00000531007 NCOA1Q15788 1441 aa14.59□□□□□ -0.07
CTNND1-228ENST00000531007 C9orf84Q5VXU9 1444 aa14.59□□□□□ -0.07
CTNND1-228ENST00000531007 CCER1Q8TC90 406 aaPredicted RBP14.59□□□□□ -0.07
CTNND1-228ENST00000531007 SYCP2Q9BX26 1530 aa14.59□□□□□ -0.07
CTNND1-228ENST00000531007 HNRNPMP52272 730 aaKnown RBP eCLIP14.58□□□□□ -0.08
CTNND1-228ENST00000531007 DIP2BQ9P265 1576 aa14.58□□□□□ -0.08
CTNND1-228ENST00000531007 RTEL1-TNFRSF6BF6WH68 1400 aa14.58□□□□□ -0.08
CTNND1-228ENST00000531007 FAM69CQ0P6D2 419 aa14.57□□□□□ -0.08
CTNND1-228ENST00000531007 ADGRL1O94910 1474 aa14.56□□□□□ -0.08
CTNND1-228ENST00000531007 CHIC2Q9UKJ5 165 aa14.55□□□□□ -0.08
CTNND1-228ENST00000531007 TEX14Q8IWB6 1497 aa14.55□□□□□ -0.08
CTNND1-228ENST00000531007 ARHGEF12Q9NZN5 1544 aa14.54□□□□□ -0.08
CTNND1-228ENST00000531007 PLXNC1O60486 1568 aa14.54□□□□□ -0.08
CTNND1-228ENST00000531007 ZNF518AQ6AHZ1 1483 aa14.53□□□□□ -0.08
CTNND1-228ENST00000531007 RRP7BPQ9NSQ0 103 aa14.53□□□□□ -0.08
CTNND1-228ENST00000531007 SCAPERQ9BY12 1400 aa14.52□□□□□ -0.08
CTNND1-228ENST00000531007 DHX57Q6P158 1386 aaKnown RBP14.52□□□□□ -0.08
CTNND1-228ENST00000531007 CHADLQ6NUI6 762 aa14.52□□□□□ -0.09
CTNND1-228ENST00000531007 ANKRD50Q9ULJ7 1429 aa14.5□□□□□ -0.09
CTNND1-228ENST00000531007 KIF15Q9NS87 1388 aa14.5□□□□□ -0.09
CTNND1-228ENST00000531007 SPAG9O60271 1321 aaKnown RBP14.5□□□□□ -0.09
CTNND1-228ENST00000531007 TRAPPC8Q9Y2L5 1435 aa14.49□□□□□ -0.09
CTNND1-228ENST00000531007 KIF13AQ9H1H9 1805 aa14.49□□□□□ -0.09
CTNND1-228ENST00000531007 DUOX2Q9NRD8 1548 aa14.49□□□□□ -0.09
CTNND1-228ENST00000531007 POGZQ7Z3K3 1410 aa14.49□□□□□ -0.09
CTNND1-228ENST00000531007 DENND4BO75064 1496 aaPredicted RBP14.48□□□□□ -0.09
CTNND1-228ENST00000531007 KDM5CP41229 1560 aa14.47□□□□□ -0.09
CTNND1-228ENST00000531007 ERBINQ96RT1 1412 aa14.47□□□□□ -0.09
CTNND1-228ENST00000531007 ZFYVE16Q7Z3T8 1539 aa14.46□□□□□ -0.09
CTNND1-228ENST00000531007 MLH3Q9UHC1 1453 aa14.46□□□□□ -0.09
CTNND1-228ENST00000531007 INO80Q9ULG1 1556 aaPredicted RBP14.46□□□□□ -0.09
CTNND1-228ENST00000531007 ATP7AQ04656 1500 aa14.45□□□□□ -0.1
CTNND1-228ENST00000531007 HAX1O00165 279 aa14.44□□□□□ -0.1
CTNND1-228ENST00000531007 AFAP1Q8N556 730 aa14.44□□□□□ -0.1
CTNND1-228ENST00000531007 KDM5DQ9BY66 1539 aa14.42□□□□□ -0.1
CTNND1-228ENST00000531007 MAGI2Q86UL8 1455 aa14.42□□□□□ -0.1
CTNND1-228ENST00000531007 PPRC1Q5VV67 1664 aaKnown RBP14.42□□□□□ -0.1
CTNND1-228ENST00000531007 TRIM52Q96A61 297 aa14.41□□□□□ -0.1
CTNND1-228ENST00000531007 TIMELESSQ9UNS1 1208 aa14.41□□□□□ -0.1
CTNND1-228ENST00000531007 HECW2Q9P2P5 1572 aa14.41□□□□□ -0.1
CTNND1-228ENST00000531007 KDM6BO15054 1643 aa14.41□□□□□ -0.1
CTNND1-228ENST00000531007 CREBZFQ9NS37 354 aa14.4□□□□□ -0.1
CTNND1-228ENST00000531007 EIF2AK4Q9P2K8 1649 aaKnown RBP14.4□□□□□ -0.1
CTNND1-228ENST00000531007 ZMYM4Q5VZL5 1548 aa14.4□□□□□ -0.1
CTNND1-228ENST00000531007 TSPOAP1O95153 1857 aa14.4□□□□□ -0.1
CTNND1-228ENST00000531007 DHX29Q7Z478 1369 aaKnown RBP14.39□□□□□ -0.11
CTNND1-228ENST00000531007 RICTORQ6R327 1708 aa14.39□□□□□ -0.11
CTNND1-228ENST00000531007 KIDINS220Q9ULH0 1771 aa14.38□□□□□ -0.11
CTNND1-228ENST00000531007 MPHOSPH9Q99550 1183 aa14.38□□□□□ -0.11
CTNND1-228ENST00000531007 FARP1Q9Y4F1 1045 aaPredicted RBP14.38□□□□□ -0.11
CTNND1-228ENST00000531007 UNC13BO14795 1591 aa14.38□□□□□ -0.11
CTNND1-228ENST00000531007 MYT1LQ9UL68 1186 aa14.37□□□□□ -0.11
CTNND1-228ENST00000531007 NUP155O75694 1391 aa14.35□□□□□ -0.11
CTNND1-228ENST00000531007 SP7Q8TDD2 431 aaPredicted RBP14.35□□□□□ -0.11
CTNND1-228ENST00000531007 A2MP01023 1474 aa14.35□□□□□ -0.11
CTNND1-228ENST00000531007 PZPP20742 1482 aa14.33□□□□□ -0.12
CTNND1-228ENST00000531007 BCORL1Q5H9F3 1711 aa14.33□□□□□ -0.12
CTNND1-228ENST00000531007 RAPGEF3O95398 923 aa14.33□□□□□ -0.12
CTNND1-228ENST00000531007 DEPDC5O75140 1603 aa14.33□□□□□ -0.12
CTNND1-228ENST00000531007 KANK1Q14678 1352 aa14.33□□□□□ -0.12
CTNND1-228ENST00000531007 FRMPD1Q5SYB0 1578 aa14.32□□□□□ -0.12
CTNND1-228ENST00000531007 IQGAP3Q86VI3 1631 aa14.32□□□□□ -0.12
CTNND1-228ENST00000531007 REREQ9P2R6 1566 aa14.31□□□□□ -0.12
CTNND1-228ENST00000531007 C19orf67A6NJJ6 358 aa14.31□□□□□ -0.12
CTNND1-228ENST00000531007 FAM135AQ9P2D6 1515 aa14.31□□□□□ -0.12
CTNND1-228ENST00000531007 DIP2CQ9Y2E4 1556 aa14.3□□□□□ -0.12
CTNND1-228ENST00000531007 ABCA6Q8N139 1617 aa14.3□□□□□ -0.12
CTNND1-228ENST00000531007 PRDM15P57071 1507 aaPredicted RBP14.29□□□□□ -0.12
CTNND1-228ENST00000531007 RNF17Q9BXT8 1623 aaKnown RBP14.29□□□□□ -0.12
CTNND1-228ENST00000531007 ATP10AO60312 1499 aa14.28□□□□□ -0.12
CTNND1-228ENST00000531007 ANKRD30BQ9BXX2 1392 aa14.28□□□□□ -0.12
CTNND1-228ENST00000531007 VWDEQ8N2E2 1590 aa14.27□□□□□ -0.12
CTNND1-228ENST00000531007 KIF3BO15066 747 aa14.27□□□□□ -0.13
CTNND1-228ENST00000531007 PKD2Q13563 968 aa14.27□□□□□ -0.13
CTNND1-228ENST00000531007 AGLP35573 1532 aa14.25□□□□□ -0.13
CTNND1-228ENST00000531007 LMTK2Q8IWU2 1503 aa14.25□□□□□ -0.13
CTNND1-228ENST00000531007 PLEKHG5O94827 1062 aa14.25□□□□□ -0.13
CTNND1-228ENST00000531007 FBXO3Q9UK99 471 aa14.25□□□□□ -0.13
CTNND1-228ENST00000531007 RPRD2Q5VT52 1461 aaKnown RBP14.24□□□□□ -0.13
CTNND1-228ENST00000531007 TET3O43151 1660 aa14.23□□□□□ -0.13
CTNND1-228ENST00000531007 ARHGEF40Q8TER5 1519 aa14.23□□□□□ -0.13
CTNND1-228ENST00000531007 YEATS2Q9ULM3 1422 aa14.23□□□□□ -0.13
CTNND1-228ENST00000531007 EVX2Q03828 476 aa14.22□□□□□ -0.13
CTNND1-228ENST00000531007 MIER1Q8N108 512 aa14.22□□□□□ -0.13
CTNND1-228ENST00000531007 COL17A1Q9UMD9 1497 aaPredicted RBP14.22□□□□□ -0.13
CTNND1-228ENST00000531007 MROH1Q8NDA8 1641 aa14.22□□□□□ -0.13
CTNND1-228ENST00000531007 TONSLQ96HA7 1378 aa14.22□□□□□ -0.13
CTNND1-228ENST00000531007 ZC3H13Q5T200 1668 aaKnown RBP14.2□□□□□ -0.14
CTNND1-228ENST00000531007 CD44P16070 742 aaKnown RBP14.2□□□□□ -0.14
CTNND1-228ENST00000531007 SIN3AQ96ST3 1273 aa14.2□□□□□ -0.14
CTNND1-228ENST00000531007 MNX1P50219 401 aaPredicted RBP14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms