RNA–Protein interactions for RNA: ENST00000530724.1

TRIM3-210, Transcript of tripartite motif containing 3, humanhuman

TSL 2

Gene TRIM3, Length 651 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-210ENST00000530724 FOXD1Q16676 465 aa15.48■□□□□ 0.07
TRIM3-210ENST00000530724 GSE1Q14687 1217 aa15.47■□□□□ 0.07
TRIM3-210ENST00000530724 ANO8Q9HCE9 1232 aaPredicted RBP15.47■□□□□ 0.07
TRIM3-210ENST00000530724 ANKRD50Q9ULJ7 1429 aa15.47■□□□□ 0.07
TRIM3-210ENST00000530724 NUP160Q12769 1436 aa15.45■□□□□ 0.06
TRIM3-210ENST00000530724 IL27Q8NEV9 243 aa15.45■□□□□ 0.06
TRIM3-210ENST00000530724 COL17A1Q9UMD9 1497 aaPredicted RBP15.45■□□□□ 0.06
TRIM3-210ENST00000530724 EIF4G3O43432 1585 aaKnown RBP15.45■□□□□ 0.06
TRIM3-210ENST00000530724 PER1O15534 1290 aaPredicted RBP15.44■□□□□ 0.06
TRIM3-210ENST00000530724 ZMYM3Q14202 1370 aa15.44■□□□□ 0.06
TRIM3-210ENST00000530724 ARHGEF5Q12774 1597 aa15.44■□□□□ 0.06
TRIM3-210ENST00000530724 CCDC144AA2RUR9 1427 aa15.43■□□□□ 0.06
TRIM3-210ENST00000530724 CENPQQ7L2Z9 268 aaPredicted RBP15.43■□□□□ 0.06
TRIM3-210ENST00000530724 UBE2Q2Q8WVN8 375 aa15.43■□□□□ 0.06
TRIM3-210ENST00000530724 SALL2Q9Y467 1007 aaPredicted RBP15.43■□□□□ 0.06
TRIM3-210ENST00000530724 ABCC10Q5T3U5 1492 aa15.43■□□□□ 0.06
TRIM3-210ENST00000530724 EIF3AQ14152 1382 aaKnown RBP15.42■□□□□ 0.06
TRIM3-210ENST00000530724 PKD2Q13563 968 aa15.42■□□□□ 0.06
TRIM3-210ENST00000530724 CARD11Q9BXL7 1154 aa15.41■□□□□ 0.06
TRIM3-210ENST00000530724 TRPM1Q7Z4N2 1603 aa15.41■□□□□ 0.06
TRIM3-210ENST00000530724 PRAG1Q86YV5 1406 aa15.41■□□□□ 0.06
TRIM3-210ENST00000530724 PRDM15P57071 1507 aaPredicted RBP15.4■□□□□ 0.06
TRIM3-210ENST00000530724 ATP10AO60312 1499 aa15.4■□□□□ 0.06
TRIM3-210ENST00000530724 NFKBIBQ15653 356 aa15.39■□□□□ 0.05
TRIM3-210ENST00000530724 SYNJ2O15056 1496 aa15.39■□□□□ 0.05
TRIM3-210ENST00000530724 FAM43AQ8N2R8 423 aa15.38■□□□□ 0.05
TRIM3-210ENST00000530724 ZNF644Q9H582 1327 aaPredicted RBP15.38■□□□□ 0.05
TRIM3-210ENST00000530724 NPC1L1Q9UHC9 1359 aa15.37■□□□□ 0.05
TRIM3-210ENST00000530724 EIF2AK4Q9P2K8 1649 aaKnown RBP15.37■□□□□ 0.05
TRIM3-210ENST00000530724 FAM161AQ3B820 660 aa15.37■□□□□ 0.05
TRIM3-210ENST00000530724 NGEFQ8N5V2 710 aa15.37■□□□□ 0.05
TRIM3-210ENST00000530724 ZNF521Q96K83 1311 aa15.37■□□□□ 0.05
TRIM3-210ENST00000530724 ST20-MTHFSA0A0A6YYL1 179 aa15.36■□□□□ 0.05
TRIM3-210ENST00000530724 CFDP1Q9UEE9 299 aaPredicted RBP15.36■□□□□ 0.05
TRIM3-210ENST00000530724 C9orf84Q5VXU9 1444 aa15.35■□□□□ 0.05
TRIM3-210ENST00000530724 IFT140Q96RY7 1462 aa15.35■□□□□ 0.05
TRIM3-210ENST00000530724 RSPH6AQ9H0K4 717 aa15.35■□□□□ 0.05
TRIM3-210ENST00000530724 CCDC141Q6ZP82 1450 aa15.34■□□□□ 0.05
TRIM3-210ENST00000530724 MAST1Q9Y2H9 1570 aa15.33■□□□□ 0.05
TRIM3-210ENST00000530724 LAS1LQ9Y4W2 734 aaKnown RBP15.33■□□□□ 0.04
TRIM3-210ENST00000530724 CDC42BPAQ5VT25 1732 aa15.33■□□□□ 0.04
TRIM3-210ENST00000530724 NUP155O75694 1391 aa15.33■□□□□ 0.04
TRIM3-210ENST00000530724 NINLQ9Y2I6 1382 aa15.33■□□□□ 0.04
TRIM3-210ENST00000530724 PRG4Q92954 1404 aaPredicted RBP15.33■□□□□ 0.04
TRIM3-210ENST00000530724 C8orf34Q49A92 452 aa15.32■□□□□ 0.04
TRIM3-210ENST00000530724 TRMT2AQ8IZ69 625 aaKnown RBP15.32■□□□□ 0.04
TRIM3-210ENST00000530724 ABCC2Q92887 1545 aa15.32■□□□□ 0.04
TRIM3-210ENST00000530724 AAMPQ13685 434 aa15.31■□□□□ 0.04
TRIM3-210ENST00000530724 RSPH4AQ5TD94 716 aa15.31■□□□□ 0.04
TRIM3-210ENST00000530724 CRBNQ96SW2 442 aa15.31■□□□□ 0.04
TRIM3-210ENST00000530724 UNC13BO14795 1591 aa15.31■□□□□ 0.04
TRIM3-210ENST00000530724 PIK3C2GO75747 1445 aa15.3■□□□□ 0.04
TRIM3-210ENST00000530724 GRIN2AQ12879 1464 aa15.3■□□□□ 0.04
TRIM3-210ENST00000530724 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.3■□□□□ 0.04
TRIM3-210ENST00000530724 TESK2Q96S53 571 aa15.3■□□□□ 0.04
TRIM3-210ENST00000530724 RNF17Q9BXT8 1623 aaKnown RBP15.3■□□□□ 0.04
TRIM3-210ENST00000530724 MRC2Q9UBG0 1479 aa15.3■□□□□ 0.04
TRIM3-210ENST00000530724 NPM2Q86SE8 214 aaKnown RBP15.29■□□□□ 0.04
TRIM3-210ENST00000530724 STAC3Q96MF2 364 aa15.29■□□□□ 0.04
TRIM3-210ENST00000530724 FAM135AQ9P2D6 1515 aa15.28■□□□□ 0.04
TRIM3-210ENST00000530724 ERBINQ96RT1 1412 aa15.27■□□□□ 0.04
TRIM3-210ENST00000530724 DUSP27Q5VZP5 1158 aa15.27■□□□□ 0.04
TRIM3-210ENST00000530724 FRAT1Q92837 279 aaPredicted RBP15.27■□□□□ 0.04
TRIM3-210ENST00000530724 ABCA8O94911 1581 aa15.27■□□□□ 0.03
TRIM3-210ENST00000530724 MAGI2Q86UL8 1455 aa15.27■□□□□ 0.03
TRIM3-210ENST00000530724 PLXNC1O60486 1568 aa15.26■□□□□ 0.03
TRIM3-210ENST00000530724 A2MP01023 1474 aa15.26■□□□□ 0.03
TRIM3-210ENST00000530724 CDCA7LQ96GN5 454 aa15.25■□□□□ 0.03
TRIM3-210ENST00000530724 BRPF3Q9ULD4 1205 aa15.25■□□□□ 0.03
TRIM3-210ENST00000530724 PLA2R1Q13018 1463 aa15.25■□□□□ 0.03
TRIM3-210ENST00000530724 MAGI1Q96QZ7 1491 aaPredicted RBP15.25■□□□□ 0.03
TRIM3-210ENST00000530724 DAXXQ9UER7 740 aaPredicted RBP15.24■□□□□ 0.03
TRIM3-210ENST00000530724 WDR7Q9Y4E6 1490 aa15.23■□□□□ 0.03
TRIM3-210ENST00000530724 SCAPERQ9BY12 1400 aa15.23■□□□□ 0.03
TRIM3-210ENST00000530724 SYNMO15061 1565 aa15.23■□□□□ 0.03
TRIM3-210ENST00000530724 VIRMAQ69YN4 1812 aaKnown RBP15.22■□□□□ 0.03
TRIM3-210ENST00000530724 MAPK8IP3Q9UPT6 1336 aa15.22■□□□□ 0.03
TRIM3-210ENST00000530724 IQGAP3Q86VI3 1631 aa15.22■□□□□ 0.03
TRIM3-210ENST00000530724 CARMIL2Q6F5E8 1435 aa15.22■□□□□ 0.03
TRIM3-210ENST00000530724 NEURL4Q96JN8 1562 aa15.21■□□□□ 0.03
TRIM3-210ENST00000530724 NCBP3Q53F19 620 aaKnown RBP15.21■□□□□ 0.03
TRIM3-210ENST00000530724 TMF1P82094 1093 aa15.2■□□□□ 0.02
TRIM3-210ENST00000530724 SLFN5Q08AF3 891 aa15.2■□□□□ 0.02
TRIM3-210ENST00000530724 PDE3AQ14432 1141 aa15.2■□□□□ 0.02
TRIM3-210ENST00000530724 L1TD1Q5T7N2 865 aaKnown RBP15.2■□□□□ 0.02
TRIM3-210ENST00000530724 DCAF11Q8TEB1 546 aa15.2■□□□□ 0.02
TRIM3-210ENST00000530724 DISP3Q9P2K9 1392 aa15.2■□□□□ 0.02
TRIM3-210ENST00000530724 PLEKHH1Q9ULM0 1364 aa15.2■□□□□ 0.02
TRIM3-210ENST00000530724 USP19O94966 1318 aa15.19■□□□□ 0.02
TRIM3-210ENST00000530724 SLC24A1O60721 1099 aa15.19■□□□□ 0.02
TRIM3-210ENST00000530724 GOLGA2Q08379 1002 aa15.19■□□□□ 0.02
TRIM3-210ENST00000530724 TSPY4P0CV99 314 aa15.18■□□□□ 0.02
TRIM3-210ENST00000530724 TSPY10P0CW01 314 aa15.18■□□□□ 0.02
TRIM3-210ENST00000530724 NKTRP30414 1462 aaKnown RBP15.18■□□□□ 0.02
TRIM3-210ENST00000530724 PLB1Q6P1J6 1458 aa15.18■□□□□ 0.02
TRIM3-210ENST00000530724 NLRP1Q9C000 1473 aa15.18■□□□□ 0.02
TRIM3-210ENST00000530724 CGNL1Q0VF96 1302 aa15.17■□□□□ 0.02
TRIM3-210ENST00000530724 CDCA8Q53HL2 280 aa15.17■□□□□ 0.02
TRIM3-210ENST00000530724 ZNF326Q5BKZ1 582 aaKnown RBP15.17■□□□□ 0.02
TRIM3-210ENST00000530724 POLR3GLQ9BT43 218 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms