RNA–Protein interactions for RNA: ENST00000530565.5

CTSF-208, Transcript of cathepsin F, humanhuman

TSL 5

Gene CTSF, Length 555 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSF-208ENST00000530565 FGD6Q6ZV73 1430 aa13.22□□□□□ -0.29
CTSF-208ENST00000530565 ADGBQ8N7X0 1667 aa13.22□□□□□ -0.29
CTSF-208ENST00000530565 DNMT1P26358 1616 aaKnown RBP13.21□□□□□ -0.29
CTSF-208ENST00000530565 PTPN23Q9H3S7 1636 aa13.21□□□□□ -0.29
CTSF-208ENST00000530565 PKD2Q13563 968 aa13.21□□□□□ -0.29
CTSF-208ENST00000530565 MBD5Q9P267 1494 aa13.21□□□□□ -0.3
CTSF-208ENST00000530565 UBAP1LF5GYI3 381 aa13.2□□□□□ -0.3
CTSF-208ENST00000530565 NEURL4Q96JN8 1562 aa13.2□□□□□ -0.3
CTSF-208ENST00000530565 POLR1AO95602 1720 aaPredicted RBP13.19□□□□□ -0.3
CTSF-208ENST00000530565 ARHGEF5Q12774 1597 aa13.19□□□□□ -0.3
CTSF-208ENST00000530565 A2ML1A8K2U0 1454 aa13.18□□□□□ -0.3
CTSF-208ENST00000530565 CCDC141Q6ZP82 1450 aa13.17□□□□□ -0.3
CTSF-208ENST00000530565 RSPH4AQ5TD94 716 aa13.17□□□□□ -0.3
CTSF-208ENST00000530565 GGT6Q6P531 493 aa13.16□□□□□ -0.3
CTSF-208ENST00000530565 MED1Q15648 1581 aaPredicted RBP13.15□□□□□ -0.3
CTSF-208ENST00000530565 PPP6R1Q9UPN7 881 aa13.15□□□□□ -0.3
CTSF-208ENST00000530565 ALKQ9UM73 1620 aa13.14□□□□□ -0.31
CTSF-208ENST00000530565 FAM50AQ14320 339 aaKnown RBP13.14□□□□□ -0.31
CTSF-208ENST00000530565 CPS1P31327 1500 aa13.13□□□□□ -0.31
CTSF-208ENST00000530565 VWDEQ8N2E2 1590 aa13.13□□□□□ -0.31
CTSF-208ENST00000530565 RTEL1-TNFRSF6BF6WH68 1400 aa13.13□□□□□ -0.31
CTSF-208ENST00000530565 RRBP1Q9P2E9 1410 aaKnown RBP13.13□□□□□ -0.31
CTSF-208ENST00000530565 CROCC2H7BZ55 1655 aa13.12□□□□□ -0.31
CTSF-208ENST00000530565 SHANK2Q9UPX8 1470 aa13.12□□□□□ -0.31
CTSF-208ENST00000530565 HSPA1LP34931 641 aa13.12□□□□□ -0.31
CTSF-208ENST00000530565 ABCC5O15440 1437 aa13.12□□□□□ -0.31
CTSF-208ENST00000530565 DAPK1P53355 1430 aa13.12□□□□□ -0.31
CTSF-208ENST00000530565 MAST1Q9Y2H9 1570 aa13.11□□□□□ -0.31
CTSF-208ENST00000530565 PZPP20742 1482 aa13.11□□□□□ -0.31
CTSF-208ENST00000530565 DHX29Q7Z478 1369 aaKnown RBP13.11□□□□□ -0.31
CTSF-208ENST00000530565 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.11□□□□□ -0.31
CTSF-208ENST00000530565 TSPY4P0CV99 314 aa13.11□□□□□ -0.31
CTSF-208ENST00000530565 TSPY10P0CW01 314 aa13.11□□□□□ -0.31
CTSF-208ENST00000530565 KDM5DQ9BY66 1539 aa13.11□□□□□ -0.31
CTSF-208ENST00000530565 FAM135AQ9P2D6 1515 aa13.11□□□□□ -0.31
CTSF-208ENST00000530565 FBXO31Q5XUX0 539 aaPredicted RBP13.1□□□□□ -0.31
CTSF-208ENST00000530565 TNRQ92752 1358 aa13.09□□□□□ -0.31
CTSF-208ENST00000530565 DEPDC5O75140 1603 aa13.09□□□□□ -0.31
CTSF-208ENST00000530565 STRCP1A6NGW2 1772 aa13.08□□□□□ -0.32
CTSF-208ENST00000530565 MED14O60244 1454 aa13.08□□□□□ -0.32
CTSF-208ENST00000530565 PIP4K2BP78356 416 aa13.06□□□□□ -0.32
CTSF-208ENST00000530565 IQGAP1P46940 1657 aa13.05□□□□□ -0.32
CTSF-208ENST00000530565 NLRP1Q9C000 1473 aa13.05□□□□□ -0.32
CTSF-208ENST00000530565 TOM1O60784 492 aa13.05□□□□□ -0.32
CTSF-208ENST00000530565 UGGT1Q9NYU2 1555 aa13.05□□□□□ -0.32
CTSF-208ENST00000530565 KIF3BO15066 747 aa13.04□□□□□ -0.32
CTSF-208ENST00000530565 CHIC2Q9UKJ5 165 aa13.04□□□□□ -0.32
CTSF-208ENST00000530565 SCAF1Q9H7N4 1312 aaKnown RBP13.04□□□□□ -0.32
CTSF-208ENST00000530565 NPHP4O75161 1426 aaPredicted RBP13.04□□□□□ -0.32
CTSF-208ENST00000530565 ADGRL2O95490 1459 aa13.04□□□□□ -0.32
CTSF-208ENST00000530565 RNF17Q9BXT8 1623 aaKnown RBP13.03□□□□□ -0.32
CTSF-208ENST00000530565 ZC3H13Q5T200 1668 aaKnown RBP13.03□□□□□ -0.32
CTSF-208ENST00000530565 ITGAEP38570 1179 aa13.03□□□□□ -0.32
CTSF-208ENST00000530565 ANKLE2Q86XL3 938 aa13.02□□□□□ -0.33
CTSF-208ENST00000530565 ANKRD30AQ9BXX3 1397 aa13.02□□□□□ -0.33
CTSF-208ENST00000530565 LRRC7Q96NW7 1537 aa13.02□□□□□ -0.33
CTSF-208ENST00000530565 SYNMO15061 1565 aa13.02□□□□□ -0.33
CTSF-208ENST00000530565 WASHC2CQ9Y4E1 1318 aa13.01□□□□□ -0.33
CTSF-208ENST00000530565 KIF15Q9NS87 1388 aa13.01□□□□□ -0.33
CTSF-208ENST00000530565 ABCC3O15438 1527 aa13.01□□□□□ -0.33
CTSF-208ENST00000530565 DUOX2Q9NRD8 1548 aa13.01□□□□□ -0.33
CTSF-208ENST00000530565 MROH1Q8NDA8 1641 aa13□□□□□ -0.33
CTSF-208ENST00000530565 ROCK1Q13464 1354 aa13□□□□□ -0.33
CTSF-208ENST00000530565 THEMISQ8N1K5 641 aaPredicted RBP13□□□□□ -0.33
CTSF-208ENST00000530565 RRP7BPQ9NSQ0 103 aa13□□□□□ -0.33
CTSF-208ENST00000530565 UBR1Q8IWV7 1749 aa12.99□□□□□ -0.33
CTSF-208ENST00000530565 XIRP1Q702N8 1843 aaKnown RBP12.98□□□□□ -0.33
CTSF-208ENST00000530565 EIF2AK4Q9P2K8 1649 aaKnown RBP12.98□□□□□ -0.33
CTSF-208ENST00000530565 ERVK-7P63135 1459 aa12.97□□□□□ -0.33
CTSF-208ENST00000530565 ERBINQ96RT1 1412 aa12.96□□□□□ -0.33
CTSF-208ENST00000530565 CEP152O94986 1710 aa12.96□□□□□ -0.33
CTSF-208ENST00000530565 ANKRD50Q9ULJ7 1429 aa12.94□□□□□ -0.34
CTSF-208ENST00000530565 ARHGAP23Q9P227 1491 aa12.93□□□□□ -0.34
CTSF-208ENST00000530565 PHF23Q9BUL5 403 aaPredicted RBP12.93□□□□□ -0.34
CTSF-208ENST00000530565 SLIT1O75093 1534 aa12.93□□□□□ -0.34
CTSF-208ENST00000530565 SCAF11Q99590 1463 aaKnown RBP12.92□□□□□ -0.34
CTSF-208ENST00000530565 RGS17Q9UGC6 210 aaPredicted RBP12.92□□□□□ -0.34
CTSF-208ENST00000530565 GCC2Q8IWJ2 1684 aa12.92□□□□□ -0.34
CTSF-208ENST00000530565 NAIPQ13075 1403 aa12.91□□□□□ -0.34
CTSF-208ENST00000530565 CFAP65Q6ZU64 1925 aaKnown RBP12.91□□□□□ -0.34
CTSF-208ENST00000530565 HFM1A2PYH4 1435 aa12.9□□□□□ -0.34
CTSF-208ENST00000530565 SENP3Q9H4L4 574 aaPredicted RBP12.9□□□□□ -0.34
CTSF-208ENST00000530565 PRDM15P57071 1507 aaPredicted RBP12.89□□□□□ -0.35
CTSF-208ENST00000530565 LTKP29376 864 aa12.89□□□□□ -0.35
CTSF-208ENST00000530565 PIK3C2BO00750 1634 aa12.88□□□□□ -0.35
CTSF-208ENST00000530565 ARHGAP31Q2M1Z3 1444 aa12.88□□□□□ -0.35
CTSF-208ENST00000530565 UNC13BO14795 1591 aa12.86□□□□□ -0.35
CTSF-208ENST00000530565 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.86□□□□□ -0.35
CTSF-208ENST00000530565 KANK1Q14678 1352 aa12.85□□□□□ -0.35
CTSF-208ENST00000530565 KDM5AP29375 1690 aaKnown RBP12.85□□□□□ -0.35
CTSF-208ENST00000530565 TRIM26Q12899 539 aaPredicted RBP12.84□□□□□ -0.35
CTSF-208ENST00000530565 TXNDC2Q86VQ3 553 aa12.84□□□□□ -0.35
CTSF-208ENST00000530565 FAM135BQ49AJ0 1406 aa12.84□□□□□ -0.35
CTSF-208ENST00000530565 TET3O43151 1660 aa12.83□□□□□ -0.35
CTSF-208ENST00000530565 ROBO1Q9Y6N7 1651 aa12.83□□□□□ -0.35
CTSF-208ENST00000530565 SETD5Q9C0A6 1442 aa12.82□□□□□ -0.36
CTSF-208ENST00000530565 LMTK2Q8IWU2 1503 aa12.82□□□□□ -0.36
CTSF-208ENST00000530565 TMEM2Q9UHN6 1383 aa12.81□□□□□ -0.36
CTSF-208ENST00000530565 NWD1Q149M9 1564 aa12.81□□□□□ -0.36
CTSF-208ENST00000530565 IQGAP3Q86VI3 1631 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms