RNA–Protein interactions for RNA: ENST00000530535.5

USP35-206, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 2

Gene USP35, Length 2,125 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-206ENST00000530535 C11orf95C9JLR9 678 aaPredicted RBP21.55■■□□□ 1.04
USP35-206ENST00000530535 HNRNPUQ00839 825 aaKnown RBP eCLIP21.55■■□□□ 1.04
USP35-206ENST00000530535 CCDC7Q96M83 1385 aa21.55■■□□□ 1.04
USP35-206ENST00000530535 POLR1AO95602 1720 aaPredicted RBP21.54■■□□□ 1.04
USP35-206ENST00000530535 NBPF8Q3BBV2 869 aa21.53■■□□□ 1.04
USP35-206ENST00000530535 SPATA31E1Q6ZUB1 1445 aa21.52■■□□□ 1.04
USP35-206ENST00000530535 ZNF518AQ6AHZ1 1483 aa21.51■■□□□ 1.03
USP35-206ENST00000530535 ZFYVE16Q7Z3T8 1539 aa21.51■■□□□ 1.03
USP35-206ENST00000530535 DUOX2Q9NRD8 1548 aa21.5■■□□□ 1.03
USP35-206ENST00000530535 CCDC184Q52MB2 194 aa21.5■■□□□ 1.03
USP35-206ENST00000530535 ANP32EQ9BTT0 268 aa21.5■■□□□ 1.03
USP35-206ENST00000530535 PZPP20742 1482 aa21.5■■□□□ 1.03
USP35-206ENST00000530535 SLC4A1APQ9BWU0 796 aaKnown RBP21.49■■□□□ 1.03
USP35-206ENST00000530535 POGZQ7Z3K3 1410 aa21.48■■□□□ 1.03
USP35-206ENST00000530535 ATP7AQ04656 1500 aa21.48■■□□□ 1.03
USP35-206ENST00000530535 MYT1LQ9UL68 1186 aa21.48■■□□□ 1.03
USP35-206ENST00000530535 INO80Q9ULG1 1556 aaPredicted RBP21.47■■□□□ 1.03
USP35-206ENST00000530535 RBM19Q9Y4C8 960 aaKnown RBP21.47■■□□□ 1.03
USP35-206ENST00000530535 NUP155O75694 1391 aa21.46■■□□□ 1.03
USP35-206ENST00000530535 PRKRIP1Q9H875 184 aaPredicted RBP21.46■■□□□ 1.03
USP35-206ENST00000530535 ERBINQ96RT1 1412 aa21.46■■□□□ 1.03
USP35-206ENST00000530535 KDM5CP41229 1560 aa21.43■■□□□ 1.02
USP35-206ENST00000530535 RAPGEF3O95398 923 aa21.43■■□□□ 1.02
USP35-206ENST00000530535 DNAJC5Q9H3Z4 198 aa21.43■■□□□ 1.02
USP35-206ENST00000530535 TSPOAP1O95153 1857 aa21.42■■□□□ 1.02
USP35-206ENST00000530535 KIF7Q2M1P5 1343 aa21.42■■□□□ 1.02
USP35-206ENST00000530535 KIF13AQ9H1H9 1805 aa21.42■■□□□ 1.02
USP35-206ENST00000530535 KDM5DQ9BY66 1539 aa21.42■■□□□ 1.02
USP35-206ENST00000530535 KIDINS220Q9ULH0 1771 aa21.41■■□□□ 1.02
USP35-206ENST00000530535 PPRC1Q5VV67 1664 aaKnown RBP21.41■■□□□ 1.02
USP35-206ENST00000530535 MLH3Q9UHC1 1453 aa21.4■■□□□ 1.02
USP35-206ENST00000530535 PKD2Q13563 968 aa21.38■■□□□ 1.01
USP35-206ENST00000530535 DHX29Q7Z478 1369 aaKnown RBP21.38■■□□□ 1.01
USP35-206ENST00000530535 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.38■■□□□ 1.01
USP35-206ENST00000530535 UNC13BO14795 1591 aa21.38■■□□□ 1.01
USP35-206ENST00000530535 HECW2Q9P2P5 1572 aa21.37■■□□□ 1.01
USP35-206ENST00000530535 IRX6P78412 446 aaPredicted RBP21.36■■□□□ 1.01
USP35-206ENST00000530535 RICTORQ6R327 1708 aa21.35■■□□□ 1.01
USP35-206ENST00000530535 FAM135AQ9P2D6 1515 aa21.34■■□□□ 1.01
USP35-206ENST00000530535 BCORL1Q5H9F3 1711 aa21.34■■□□□ 1.01
USP35-206ENST00000530535 ERICH6BQ5W0A0 696 aa21.34■■□□□ 1.01
USP35-206ENST00000530535 MRS2Q9HD23 443 aa21.34■■□□□ 1.01
USP35-206ENST00000530535 ZBED9Q6R2W3 1325 aa21.33■■□□□ 1.01
USP35-206ENST00000530535 MAGI2Q86UL8 1455 aa21.33■■□□□ 1.01
USP35-206ENST00000530535 A2MP01023 1474 aa21.32■■□□□ 1
USP35-206ENST00000530535 KIF3BO15066 747 aa21.31■■□□□ 1
USP35-206ENST00000530535 FAM9BQ8IZU0 186 aa21.3■■□□□ 1
USP35-206ENST00000530535 IQGAP3Q86VI3 1631 aa21.3■■□□□ 1
USP35-206ENST00000530535 FRMPD1Q5SYB0 1578 aa21.29■■□□□ 1
USP35-206ENST00000530535 EIF2AK4Q9P2K8 1649 aaKnown RBP21.29■■□□□ 1
USP35-206ENST00000530535 ABCA6Q8N139 1617 aa21.28■■□□□ 1
USP35-206ENST00000530535 USP47Q96K76 1375 aa21.27■■□□□ 1
USP35-206ENST00000530535 DEPDC5O75140 1603 aa21.26■□□□□ 0.99
USP35-206ENST00000530535 ZMYM4Q5VZL5 1548 aa21.25■□□□□ 0.99
USP35-206ENST00000530535 UHRF1BP1Q6BDS2 1440 aa21.25■□□□□ 0.99
USP35-206ENST00000530535 DIP2CQ9Y2E4 1556 aa21.24■□□□□ 0.99
USP35-206ENST00000530535 PPP4R2Q9NY27 417 aa21.24■□□□□ 0.99
USP35-206ENST00000530535 YEATS2Q9ULM3 1422 aa21.24■□□□□ 0.99
USP35-206ENST00000530535 KANK1Q14678 1352 aa21.24■□□□□ 0.99
USP35-206ENST00000530535 RALGAPBQ86X10 1494 aa21.22■□□□□ 0.99
USP35-206ENST00000530535 COL17A1Q9UMD9 1497 aaPredicted RBP21.22■□□□□ 0.99
USP35-206ENST00000530535 MSH5O43196 834 aa21.22■□□□□ 0.99
USP35-206ENST00000530535 TRHP20396 242 aaPredicted RBP21.22■□□□□ 0.99
USP35-206ENST00000530535 PRDM15P57071 1507 aaPredicted RBP21.2■□□□□ 0.98
USP35-206ENST00000530535 VWDEQ8N2E2 1590 aa21.2■□□□□ 0.98
USP35-206ENST00000530535 FANCIQ9NVI1 1328 aa21.19■□□□□ 0.98
USP35-206ENST00000530535 MROH1Q8NDA8 1641 aa21.19■□□□□ 0.98
USP35-206ENST00000530535 ARID4BQ4LE39 1312 aaPredicted RBP21.19■□□□□ 0.98
USP35-206ENST00000530535 RNF17Q9BXT8 1623 aaKnown RBP21.18■□□□□ 0.98
USP35-206ENST00000530535 GGT6Q6P531 493 aa21.17■□□□□ 0.98
USP35-206ENST00000530535 SMG6Q86US8 1419 aaKnown RBP21.17■□□□□ 0.98
USP35-206ENST00000530535 ATP10AO60312 1499 aa21.16■□□□□ 0.98
USP35-206ENST00000530535 PLA2R1Q13018 1463 aa21.15■□□□□ 0.98
USP35-206ENST00000530535 ZNF326Q5BKZ1 582 aaKnown RBP21.14■□□□□ 0.97
USP35-206ENST00000530535 TET3O43151 1660 aa21.14■□□□□ 0.97
USP35-206ENST00000530535 E9PCH4 1651 aa21.12■□□□□ 0.97
USP35-206ENST00000530535 CCDC144AA2RUR9 1427 aa21.11■□□□□ 0.97
USP35-206ENST00000530535 ROCK2O75116 1388 aaKnown RBP21.11■□□□□ 0.97
USP35-206ENST00000530535 LMTK2Q8IWU2 1503 aa21.1■□□□□ 0.97
USP35-206ENST00000530535 B4GALNT3Q6L9W6 998 aa21.1■□□□□ 0.97
USP35-206ENST00000530535 RNF123Q5XPI4 1314 aa21.09■□□□□ 0.97
USP35-206ENST00000530535 WASHC2CQ9Y4E1 1318 aa21.09■□□□□ 0.97
USP35-206ENST00000530535 REREQ9P2R6 1566 aa21.08■□□□□ 0.97
USP35-206ENST00000530535 PTPRTO14522 1441 aa21.07■□□□□ 0.96
USP35-206ENST00000530535 CEP152O94986 1710 aa21.06■□□□□ 0.96
USP35-206ENST00000530535 POLR3GLQ9BT43 218 aa21.06■□□□□ 0.96
USP35-206ENST00000530535 NUDCQ9Y266 331 aa21.06■□□□□ 0.96
USP35-206ENST00000530535 EFCAB6Q5THR3 1501 aa21.06■□□□□ 0.96
USP35-206ENST00000530535 PNISRQ8TF01 805 aaKnown RBP21.05■□□□□ 0.96
USP35-206ENST00000530535 ARHGEF40Q8TER5 1519 aa21.05■□□□□ 0.96
USP35-206ENST00000530535 CARD11Q9BXL7 1154 aa21.05■□□□□ 0.96
USP35-206ENST00000530535 ABCC3O15438 1527 aa21.04■□□□□ 0.96
USP35-206ENST00000530535 AGLP35573 1532 aa21.04■□□□□ 0.96
USP35-206ENST00000530535 TRPM2O94759 1503 aa21.03■□□□□ 0.96
USP35-206ENST00000530535 SPHKAPQ2M3C7 1700 aa21.02■□□□□ 0.96
USP35-206ENST00000530535 LRPPRCP42704 1394 aaKnown RBP21.02■□□□□ 0.96
USP35-206ENST00000530535 CNGB1Q14028 1251 aaPredicted RBP21.01■□□□□ 0.95
USP35-206ENST00000530535 TRPM1Q7Z4N2 1603 aa21.01■□□□□ 0.95
USP35-206ENST00000530535 ST20-MTHFSA0A0A6YYL1 179 aa21■□□□□ 0.95
USP35-206ENST00000530535 NPATQ14207 1427 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 172.9 ms