RNA–Protein interactions for RNA: ENST00000530470.1

TRIM29-215, Transcript of tripartite motif containing 29, humanhuman

TSL 2

Gene TRIM29, Length 771 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM29-215ENST00000530470 DMRT2Q9Y5R5 561 aa18.46■□□□□ 0.55
TRIM29-215ENST00000530470 MYO3AQ8NEV4 1616 aa18.45■□□□□ 0.54
TRIM29-215ENST00000530470 FAM135AQ9P2D6 1515 aa18.44■□□□□ 0.54
TRIM29-215ENST00000530470 KDM5DQ9BY66 1539 aa18.44■□□□□ 0.54
TRIM29-215ENST00000530470 PTPN23Q9H3S7 1636 aa18.42■□□□□ 0.54
TRIM29-215ENST00000530470 ZNF142P52746 1687 aaPredicted RBP18.42■□□□□ 0.54
TRIM29-215ENST00000530470 NCOA1Q15788 1441 aa18.41■□□□□ 0.54
TRIM29-215ENST00000530470 CAMSAP1Q5T5Y3 1602 aa18.41■□□□□ 0.54
TRIM29-215ENST00000530470 PTPRTO14522 1441 aa18.4■□□□□ 0.54
TRIM29-215ENST00000530470 CEP170BQ9Y4F5 1589 aaPredicted RBP18.4■□□□□ 0.54
TRIM29-215ENST00000530470 WASHC2CQ9Y4E1 1318 aa18.4■□□□□ 0.54
TRIM29-215ENST00000530470 RNF17Q9BXT8 1623 aaKnown RBP18.39■□□□□ 0.53
TRIM29-215ENST00000530470 EIF2AK4Q9P2K8 1649 aaKnown RBP18.39■□□□□ 0.53
TRIM29-215ENST00000530470 FGD6Q6ZV73 1430 aa18.39■□□□□ 0.53
TRIM29-215ENST00000530470 CROCC2H7BZ55 1655 aa18.38■□□□□ 0.53
TRIM29-215ENST00000530470 CERKQ8TCT0 537 aa18.38■□□□□ 0.53
TRIM29-215ENST00000530470 PZPP20742 1482 aa18.38■□□□□ 0.53
TRIM29-215ENST00000530470 ABCC5O15440 1437 aa18.37■□□□□ 0.53
TRIM29-215ENST00000530470 SHANK2Q9UPX8 1470 aa18.37■□□□□ 0.53
TRIM29-215ENST00000530470 TCOF1Q13428 1488 aaKnown RBP18.36■□□□□ 0.53
TRIM29-215ENST00000530470 DUOX2Q9NRD8 1548 aa18.36■□□□□ 0.53
TRIM29-215ENST00000530470 DNMT1P26358 1616 aaKnown RBP18.35■□□□□ 0.53
TRIM29-215ENST00000530470 ZC3H13Q5T200 1668 aaKnown RBP18.34■□□□□ 0.53
TRIM29-215ENST00000530470 A2ML1A8K2U0 1454 aa18.34■□□□□ 0.53
TRIM29-215ENST00000530470 PLA2R1Q13018 1463 aa18.34■□□□□ 0.53
TRIM29-215ENST00000530470 DAPK1P53355 1430 aa18.34■□□□□ 0.53
TRIM29-215ENST00000530470 TNRQ92752 1358 aa18.34■□□□□ 0.53
TRIM29-215ENST00000530470 FBXO31Q5XUX0 539 aaPredicted RBP18.34■□□□□ 0.53
TRIM29-215ENST00000530470 MROH1Q8NDA8 1641 aa18.33■□□□□ 0.52
TRIM29-215ENST00000530470 ABCC3O15438 1527 aa18.33■□□□□ 0.52
TRIM29-215ENST00000530470 KIF15Q9NS87 1388 aa18.32■□□□□ 0.52
TRIM29-215ENST00000530470 NCKAP5LQ9HCH0 1330 aa18.32■□□□□ 0.52
TRIM29-215ENST00000530470 PKD2Q13563 968 aa18.3■□□□□ 0.52
TRIM29-215ENST00000530470 RRP7BPQ9NSQ0 103 aa18.3■□□□□ 0.52
TRIM29-215ENST00000530470 ERBINQ96RT1 1412 aa18.3■□□□□ 0.52
TRIM29-215ENST00000530470 CEP152O94986 1710 aa18.28■□□□□ 0.52
TRIM29-215ENST00000530470 PRDM15P57071 1507 aaPredicted RBP18.27■□□□□ 0.51
TRIM29-215ENST00000530470 LTBP4Q8N2S1 1624 aa18.27■□□□□ 0.51
TRIM29-215ENST00000530470 NLRP1Q9C000 1473 aa18.26■□□□□ 0.51
TRIM29-215ENST00000530470 ANKRD30AQ9BXX3 1397 aa18.26■□□□□ 0.51
TRIM29-215ENST00000530470 SPATA31D1Q6ZQQ2 1576 aa18.25■□□□□ 0.51
TRIM29-215ENST00000530470 CHIC2Q9UKJ5 165 aa18.25■□□□□ 0.51
TRIM29-215ENST00000530470 DEPDC5O75140 1603 aa18.24■□□□□ 0.51
TRIM29-215ENST00000530470 POLR1AO95602 1720 aaPredicted RBP18.23■□□□□ 0.51
TRIM29-215ENST00000530470 ERVK-7P63135 1459 aa18.23■□□□□ 0.51
TRIM29-215ENST00000530470 FAM50AQ14320 339 aaKnown RBP18.23■□□□□ 0.51
TRIM29-215ENST00000530470 UGGT1Q9NYU2 1555 aa18.22■□□□□ 0.51
TRIM29-215ENST00000530470 ADGRL2O95490 1459 aa18.21■□□□□ 0.51
TRIM29-215ENST00000530470 THEMISQ8N1K5 641 aaPredicted RBP18.21■□□□□ 0.51
TRIM29-215ENST00000530470 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.21■□□□□ 0.51
TRIM29-215ENST00000530470 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.2■□□□□ 0.5
TRIM29-215ENST00000530470 NEURL4Q96JN8 1562 aa18.2■□□□□ 0.5
TRIM29-215ENST00000530470 ZNF335Q9H4Z2 1342 aaPredicted RBP18.2■□□□□ 0.5
TRIM29-215ENST00000530470 IQSEC2Q5JU85 1478 aa18.2■□□□□ 0.5
TRIM29-215ENST00000530470 KANK1Q14678 1352 aa18.19■□□□□ 0.5
TRIM29-215ENST00000530470 ARHGAP31Q2M1Z3 1444 aa18.19■□□□□ 0.5
TRIM29-215ENST00000530470 ANKLE2Q86XL3 938 aa18.17■□□□□ 0.5
TRIM29-215ENST00000530470 CFAP65Q6ZU64 1925 aaKnown RBP18.16■□□□□ 0.5
TRIM29-215ENST00000530470 VWDEQ8N2E2 1590 aa18.16■□□□□ 0.5
TRIM29-215ENST00000530470 LMTK2Q8IWU2 1503 aa18.15■□□□□ 0.5
TRIM29-215ENST00000530470 UBR1Q8IWV7 1749 aa18.14■□□□□ 0.49
TRIM29-215ENST00000530470 ANKRD50Q9ULJ7 1429 aa18.13■□□□□ 0.49
TRIM29-215ENST00000530470 MED14O60244 1454 aa18.13■□□□□ 0.49
TRIM29-215ENST00000530470 ADRA2BP18089 450 aa18.12■□□□□ 0.49
TRIM29-215ENST00000530470 NPHP4O75161 1426 aaPredicted RBP18.12■□□□□ 0.49
TRIM29-215ENST00000530470 EFCAB6Q5THR3 1501 aa18.1■□□□□ 0.49
TRIM29-215ENST00000530470 PPARGC1BQ86YN6 1023 aaKnown RBP18.1■□□□□ 0.49
TRIM29-215ENST00000530470 IQGAP1P46940 1657 aa18.09■□□□□ 0.49
TRIM29-215ENST00000530470 PIK3C2BO00750 1634 aa18.09■□□□□ 0.49
TRIM29-215ENST00000530470 CPS1P31327 1500 aa18.08■□□□□ 0.48
TRIM29-215ENST00000530470 ROCK1Q13464 1354 aa18.06■□□□□ 0.48
TRIM29-215ENST00000530470 SLIT1O75093 1534 aa18.06■□□□□ 0.48
TRIM29-215ENST00000530470 ARHGAP23Q9P227 1491 aa18.06■□□□□ 0.48
TRIM29-215ENST00000530470 SYNMO15061 1565 aa18.05■□□□□ 0.48
TRIM29-215ENST00000530470 SCAF11Q99590 1463 aaKnown RBP18.05■□□□□ 0.48
TRIM29-215ENST00000530470 NOS1P29475 1434 aa18.05■□□□□ 0.48
TRIM29-215ENST00000530470 UNC13BO14795 1591 aa18.04■□□□□ 0.48
TRIM29-215ENST00000530470 KDM5AP29375 1690 aaKnown RBP18.04■□□□□ 0.48
TRIM29-215ENST00000530470 UBAP1LF5GYI3 381 aa18.04■□□□□ 0.48
TRIM29-215ENST00000530470 TET3O43151 1660 aa18.03■□□□□ 0.48
TRIM29-215ENST00000530470 RPRD2Q5VT52 1461 aaKnown RBP18.03■□□□□ 0.48
TRIM29-215ENST00000530470 ITGAEP38570 1179 aa18.03■□□□□ 0.48
TRIM29-215ENST00000530470 LTKP29376 864 aa18.02■□□□□ 0.48
TRIM29-215ENST00000530470 IDI1Q13907 227 aa18.02■□□□□ 0.48
TRIM29-215ENST00000530470 TXNDC2Q86VQ3 553 aa18.02■□□□□ 0.48
TRIM29-215ENST00000530470 STAG3Q9UJ98 1225 aa18.02■□□□□ 0.48
TRIM29-215ENST00000530470 EID1Q9Y6B2 187 aa18.01■□□□□ 0.47
TRIM29-215ENST00000530470 GCC2Q8IWJ2 1684 aa18.01■□□□□ 0.47
TRIM29-215ENST00000530470 TMEM2Q9UHN6 1383 aa18.01■□□□□ 0.47
TRIM29-215ENST00000530470 ADGRB3O60242 1522 aa17.99■□□□□ 0.47
TRIM29-215ENST00000530470 SLC52A1Q9NWF4 448 aa17.98■□□□□ 0.47
TRIM29-215ENST00000530470 STRCP1A6NGW2 1772 aa17.98■□□□□ 0.47
TRIM29-215ENST00000530470 IQGAP3Q86VI3 1631 aa17.98■□□□□ 0.47
TRIM29-215ENST00000530470 RRBP1Q9P2E9 1410 aaKnown RBP17.96■□□□□ 0.47
TRIM29-215ENST00000530470 E9PCH4 1651 aa17.95■□□□□ 0.46
TRIM29-215ENST00000530470 LRRC7Q96NW7 1537 aa17.94■□□□□ 0.46
TRIM29-215ENST00000530470 NUP155O75694 1391 aa17.93■□□□□ 0.46
TRIM29-215ENST00000530470 TOM1O60784 492 aa17.93■□□□□ 0.46
TRIM29-215ENST00000530470 SCAF1Q9H7N4 1312 aaKnown RBP17.91■□□□□ 0.46
TRIM29-215ENST00000530470 TMEM131LA2VDJ0 1609 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms