RNA–Protein interactions for RNA: ENST00000530451.1

SYVN1-212, Transcript of synoviolin 1, humanhuman

TSL 5

Gene SYVN1, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-212ENST00000530451 KDM5DQ9BY66 1539 aa30.23■■■□□ 2.43
SYVN1-212ENST00000530451 APLP2Q06481 763 aa30.23■■■□□ 2.43
SYVN1-212ENST00000530451 MAST1Q9Y2H9 1570 aa30.23■■■□□ 2.43
SYVN1-212ENST00000530451 MIA2Q96PC5 1412 aa30.22■■■□□ 2.43
SYVN1-212ENST00000530451 WASHC2CQ9Y4E1 1318 aa30.21■■■□□ 2.43
SYVN1-212ENST00000530451 FBXO31Q5XUX0 539 aaPredicted RBP30.2■■■□□ 2.43
SYVN1-212ENST00000530451 CFAP65Q6ZU64 1925 aaKnown RBP30.17■■■□□ 2.42
SYVN1-212ENST00000530451 DNMT1P26358 1616 aaKnown RBP30.16■■■□□ 2.42
SYVN1-212ENST00000530451 LTBP4Q8N2S1 1624 aa30.15■■■□□ 2.42
SYVN1-212ENST00000530451 FAM135AQ9P2D6 1515 aa30.15■■■□□ 2.42
SYVN1-212ENST00000530451 RNF17Q9BXT8 1623 aaKnown RBP30.14■■■□□ 2.42
SYVN1-212ENST00000530451 PTPN23Q9H3S7 1636 aa30.14■■■□□ 2.42
SYVN1-212ENST00000530451 A2ML1A8K2U0 1454 aa30.14■■■□□ 2.42
SYVN1-212ENST00000530451 PZPP20742 1482 aa30.14■■■□□ 2.42
SYVN1-212ENST00000530451 CROCC2H7BZ55 1655 aa30.14■■■□□ 2.41
SYVN1-212ENST00000530451 TNRQ92752 1358 aa30.13■■■□□ 2.41
SYVN1-212ENST00000530451 PLA2R1Q13018 1463 aa30.12■■■□□ 2.41
SYVN1-212ENST00000530451 EIF2AK4Q9P2K8 1649 aaKnown RBP30.11■■■□□ 2.41
SYVN1-212ENST00000530451 CEP152O94986 1710 aa30.1■■■□□ 2.41
SYVN1-212ENST00000530451 TCOF1Q13428 1488 aaKnown RBP30.09■■■□□ 2.41
SYVN1-212ENST00000530451 PKD2Q13563 968 aa30.09■■■□□ 2.41
SYVN1-212ENST00000530451 POLR1AO95602 1720 aaPredicted RBP30.08■■■□□ 2.41
SYVN1-212ENST00000530451 ZC3H13Q5T200 1668 aaKnown RBP30.07■■■□□ 2.41
SYVN1-212ENST00000530451 ABCC3O15438 1527 aa30.06■■■□□ 2.4
SYVN1-212ENST00000530451 ZNF335Q9H4Z2 1342 aaPredicted RBP30.05■■■□□ 2.4
SYVN1-212ENST00000530451 MROH1Q8NDA8 1641 aa30.05■■■□□ 2.4
SYVN1-212ENST00000530451 DUOX2Q9NRD8 1548 aa30.05■■■□□ 2.4
SYVN1-212ENST00000530451 ABCC5O15440 1437 aa30.05■■■□□ 2.4
SYVN1-212ENST00000530451 FGD6Q6ZV73 1430 aa30.02■■■□□ 2.4
SYVN1-212ENST00000530451 RRP7BPQ9NSQ0 103 aa30.01■■■□□ 2.39
SYVN1-212ENST00000530451 KIF15Q9NS87 1388 aa30■■■□□ 2.39
SYVN1-212ENST00000530451 SHANK2Q9UPX8 1470 aa29.99■■■□□ 2.39
SYVN1-212ENST00000530451 DAPK1P53355 1430 aa29.99■■■□□ 2.39
SYVN1-212ENST00000530451 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.97■■■□□ 2.39
SYVN1-212ENST00000530451 UGGT1Q9NYU2 1555 aa29.97■■■□□ 2.39
SYVN1-212ENST00000530451 NEURL4Q96JN8 1562 aa29.96■■■□□ 2.39
SYVN1-212ENST00000530451 NLRP1Q9C000 1473 aa29.96■■■□□ 2.39
SYVN1-212ENST00000530451 CHIC2Q9UKJ5 165 aa29.95■■■□□ 2.39
SYVN1-212ENST00000530451 SPATA31D1Q6ZQQ2 1576 aa29.94■■■□□ 2.38
SYVN1-212ENST00000530451 IQSEC2Q5JU85 1478 aa29.93■■■□□ 2.38
SYVN1-212ENST00000530451 THEMISQ8N1K5 641 aaPredicted RBP29.92■■■□□ 2.38
SYVN1-212ENST00000530451 ERVK-7P63135 1459 aa29.92■■■□□ 2.38
SYVN1-212ENST00000530451 ERBINQ96RT1 1412 aa29.91■■■□□ 2.38
SYVN1-212ENST00000530451 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.91■■■□□ 2.389e-6■□□□□ 10.7
SYVN1-212ENST00000530451 PRDM15P57071 1507 aaPredicted RBP29.9■■■□□ 2.38
SYVN1-212ENST00000530451 ANKLE2Q86XL3 938 aa29.89■■■□□ 2.38
SYVN1-212ENST00000530451 DEPDC5O75140 1603 aa29.87■■■□□ 2.37
SYVN1-212ENST00000530451 FAM50AQ14320 339 aaKnown RBP29.86■■■□□ 2.37
SYVN1-212ENST00000530451 ANKRD30AQ9BXX3 1397 aa29.85■■■□□ 2.37
SYVN1-212ENST00000530451 UBR1Q8IWV7 1749 aa29.85■■■□□ 2.37
SYVN1-212ENST00000530451 IQGAP1P46940 1657 aa29.82■■■□□ 2.36
SYVN1-212ENST00000530451 UBAP1LF5GYI3 381 aa29.81■■■□□ 2.36
SYVN1-212ENST00000530451 NPHP4O75161 1426 aaPredicted RBP29.8■■■□□ 2.36
SYVN1-212ENST00000530451 KANK1Q14678 1352 aa29.78■■■□□ 2.36
SYVN1-212ENST00000530451 MED14O60244 1454 aa29.77■■■□□ 2.36
SYVN1-212ENST00000530451 ARHGAP31Q2M1Z3 1444 aa29.77■■■□□ 2.36
SYVN1-212ENST00000530451 VWDEQ8N2E2 1590 aa29.76■■■□□ 2.35
SYVN1-212ENST00000530451 PIK3C2BO00750 1634 aa29.74■■■□□ 2.35
SYVN1-212ENST00000530451 CPS1P31327 1500 aa29.73■■■□□ 2.35
SYVN1-212ENST00000530451 ADGRL2O95490 1459 aa29.73■■■□□ 2.35
SYVN1-212ENST00000530451 STRCP1A6NGW2 1772 aa29.72■■■□□ 2.35
SYVN1-212ENST00000530451 DISP3Q9P2K9 1392 aa29.68■■■□□ 2.34
SYVN1-212ENST00000530451 LMTK2Q8IWU2 1503 aa29.67■■■□□ 2.34
SYVN1-212ENST00000530451 PPARGC1BQ86YN6 1023 aaKnown RBP29.66■■■□□ 2.34
SYVN1-212ENST00000530451 SCAF11Q99590 1463 aaKnown RBP29.66■■■□□ 2.34
SYVN1-212ENST00000530451 SCAF1Q9H7N4 1312 aaKnown RBP29.66■■■□□ 2.34
SYVN1-212ENST00000530451 LTKP29376 864 aa29.64■■■□□ 2.34
SYVN1-212ENST00000530451 TXNDC2Q86VQ3 553 aa29.64■■■□□ 2.34
SYVN1-212ENST00000530451 STAG3Q9UJ98 1225 aa29.64■■■□□ 2.34
SYVN1-212ENST00000530451 EFCAB6Q5THR3 1501 aa29.64■■■□□ 2.34
SYVN1-212ENST00000530451 SYNMO15061 1565 aa29.64■■■□□ 2.33
SYVN1-212ENST00000530451 ANKRD50Q9ULJ7 1429 aa29.63■■■□□ 2.33
SYVN1-212ENST00000530451 SLIT1O75093 1534 aa29.63■■■□□ 2.33
SYVN1-212ENST00000530451 ARHGAP23Q9P227 1491 aa29.62■■■□□ 2.33
SYVN1-212ENST00000530451 PIP4K2BP78356 416 aa29.62■■■□□ 2.33
SYVN1-212ENST00000530451 IDI1Q13907 227 aa29.59■■■□□ 2.33
SYVN1-212ENST00000530451 TOM1O60784 492 aa29.58■■■□□ 2.33
SYVN1-212ENST00000530451 EID1Q9Y6B2 187 aa29.58■■■□□ 2.33
SYVN1-212ENST00000530451 KDM5AP29375 1690 aaKnown RBP29.57■■■□□ 2.32
SYVN1-212ENST00000530451 MYO5BQ9ULV0 1848 aa29.57■■■□□ 2.32
SYVN1-212ENST00000530451 TMEM2Q9UHN6 1383 aa29.55■■■□□ 2.32
SYVN1-212ENST00000530451 ITGAEP38570 1179 aa29.55■■■□□ 2.32
SYVN1-212ENST00000530451 TET3O43151 1660 aa29.55■■■□□ 2.32
SYVN1-212ENST00000530451 NOS1P29475 1434 aa29.54■■■□□ 2.32
SYVN1-212ENST00000530451 LRRC7Q96NW7 1537 aa29.54■■■□□ 2.32
SYVN1-212ENST00000530451 GCC2Q8IWJ2 1684 aa29.53■■■□□ 2.32
SYVN1-212ENST00000530451 UNC13BO14795 1591 aa29.52■■■□□ 2.32
SYVN1-212ENST00000530451 ILDR2Q71H61 639 aa29.51■■■□□ 2.31
SYVN1-212ENST00000530451 ADGRB3O60242 1522 aa29.5■■■□□ 2.31
SYVN1-212ENST00000530451 ALKQ9UM73 1620 aa29.5■■■□□ 2.31
SYVN1-212ENST00000530451 HSPA1LP34931 641 aa29.5■■■□□ 2.31
SYVN1-212ENST00000530451 XIRP1Q702N8 1843 aaKnown RBP29.5■■■□□ 2.31
SYVN1-212ENST00000530451 RPRD2Q5VT52 1461 aaKnown RBP29.47■■■□□ 2.31
SYVN1-212ENST00000530451 E9PCH4 1651 aa29.46■■■□□ 2.31
SYVN1-212ENST00000530451 ROCK1Q13464 1354 aa29.45■■■□□ 2.31
SYVN1-212ENST00000530451 SENP3Q9H4L4 574 aaPredicted RBP29.45■■■□□ 2.31
SYVN1-212ENST00000530451 SLC52A1Q9NWF4 448 aa29.44■■■□□ 2.3
SYVN1-212ENST00000530451 SLC26A8Q96RN1 970 aa29.41■■■□□ 2.3
SYVN1-212ENST00000530451 IQGAP3Q86VI3 1631 aa29.41■■■□□ 2.3
SYVN1-212ENST00000530451 BCANQ96GW7 911 aa29.39■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 119 ms