RNA–Protein interactions for RNA: ENST00000530395.1

SMPD1-204, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 5

Gene SMPD1, Length 447 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-204ENST00000530395 CEP170BQ9Y4F5 1589 aaPredicted RBP32.93■■■□□ 2.86
SMPD1-204ENST00000530395 KDM5DQ9BY66 1539 aa32.92■■■□□ 2.86
SMPD1-204ENST00000530395 MAST1Q9Y2H9 1570 aa32.92■■■□□ 2.86
SMPD1-204ENST00000530395 APLP2Q06481 763 aa32.89■■■□□ 2.86
SMPD1-204ENST00000530395 PLA2R1Q13018 1463 aa32.84■■■□□ 2.85
SMPD1-204ENST00000530395 WASHC2CQ9Y4E1 1318 aa32.82■■■□□ 2.84
SMPD1-204ENST00000530395 PZPP20742 1482 aa32.82■■■□□ 2.84
SMPD1-204ENST00000530395 RNF17Q9BXT8 1623 aaKnown RBP32.81■■■□□ 2.84
SMPD1-204ENST00000530395 EIF2AK4Q9P2K8 1649 aaKnown RBP32.81■■■□□ 2.84
SMPD1-204ENST00000530395 A2ML1A8K2U0 1454 aa32.8■■■□□ 2.84
SMPD1-204ENST00000530395 TNRQ92752 1358 aa32.77■■■□□ 2.84
SMPD1-204ENST00000530395 ZC3H13Q5T200 1668 aaKnown RBP32.77■■■□□ 2.84
SMPD1-204ENST00000530395 DNMT1P26358 1616 aaKnown RBP32.77■■■□□ 2.84
SMPD1-204ENST00000530395 NCKAP5LQ9HCH0 1330 aa32.77■■■□□ 2.84
SMPD1-204ENST00000530395 PKD2Q13563 968 aa32.76■■■□□ 2.83
SMPD1-204ENST00000530395 PTPN23Q9H3S7 1636 aa32.76■■■□□ 2.83
SMPD1-204ENST00000530395 CROCC2H7BZ55 1655 aa32.75■■■□□ 2.83
SMPD1-204ENST00000530395 TCOF1Q13428 1488 aaKnown RBP32.75■■■□□ 2.83
SMPD1-204ENST00000530395 LTBP4Q8N2S1 1624 aa32.75■■■□□ 2.83
SMPD1-204ENST00000530395 FBXO31Q5XUX0 539 aaPredicted RBP32.72■■■□□ 2.83
SMPD1-204ENST00000530395 DUOX2Q9NRD8 1548 aa32.72■■■□□ 2.83
SMPD1-204ENST00000530395 SHANK2Q9UPX8 1470 aa32.71■■■□□ 2.83
SMPD1-204ENST00000530395 ABCC3O15438 1527 aa32.69■■■□□ 2.82
SMPD1-204ENST00000530395 POLR1AO95602 1720 aaPredicted RBP32.68■■■□□ 2.82
SMPD1-204ENST00000530395 IQSEC2Q5JU85 1478 aa32.67■■■□□ 2.82
SMPD1-204ENST00000530395 FGD6Q6ZV73 1430 aa32.66■■■□□ 2.82
SMPD1-204ENST00000530395 ABCC5O15440 1437 aa32.65■■■□□ 2.82
SMPD1-204ENST00000530395 NLRP1Q9C000 1473 aa32.65■■■□□ 2.82
SMPD1-204ENST00000530395 MROH1Q8NDA8 1641 aa32.65■■■□□ 2.82
SMPD1-204ENST00000530395 CEP152O94986 1710 aa32.63■■■□□ 2.81
SMPD1-204ENST00000530395 KIF15Q9NS87 1388 aa32.63■■■□□ 2.81
SMPD1-204ENST00000530395 DAPK1P53355 1430 aa32.61■■■□□ 2.81
SMPD1-204ENST00000530395 ERBINQ96RT1 1412 aa32.6■■■□□ 2.81
SMPD1-204ENST00000530395 SPATA31D1Q6ZQQ2 1576 aa32.58■■■□□ 2.81
SMPD1-204ENST00000530395 UGGT1Q9NYU2 1555 aa32.58■■■□□ 2.81
SMPD1-204ENST00000530395 ZNF335Q9H4Z2 1342 aaPredicted RBP32.58■■■□□ 2.81
SMPD1-204ENST00000530395 PRDM15P57071 1507 aaPredicted RBP32.56■■■□□ 2.8
SMPD1-204ENST00000530395 NEURL4Q96JN8 1562 aa32.55■■■□□ 2.8
SMPD1-204ENST00000530395 THEMISQ8N1K5 641 aaPredicted RBP32.55■■■□□ 2.8
SMPD1-204ENST00000530395 ERVK-7P63135 1459 aa32.54■■■□□ 2.8
SMPD1-204ENST00000530395 RRP7BPQ9NSQ0 103 aa32.54■■■□□ 2.8
SMPD1-204ENST00000530395 CFAP65Q6ZU64 1925 aaKnown RBP32.52■■■□□ 2.8
SMPD1-204ENST00000530395 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.52■■■□□ 2.8
SMPD1-204ENST00000530395 DEPDC5O75140 1603 aa32.51■■■□□ 2.79
SMPD1-204ENST00000530395 ANKLE2Q86XL3 938 aa32.5■■■□□ 2.79
SMPD1-204ENST00000530395 ANKRD30AQ9BXX3 1397 aa32.49■■■□□ 2.79
SMPD1-204ENST00000530395 KANK1Q14678 1352 aa32.45■■■□□ 2.78
SMPD1-204ENST00000530395 ARHGAP31Q2M1Z3 1444 aa32.44■■■□□ 2.78
SMPD1-204ENST00000530395 CHIC2Q9UKJ5 165 aa32.43■■■□□ 2.78
SMPD1-204ENST00000530395 MED14O60244 1454 aa32.42■■■□□ 2.78
SMPD1-204ENST00000530395 UBR1Q8IWV7 1749 aa32.41■■■□□ 2.78
SMPD1-204ENST00000530395 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.41■■■□□ 2.78
SMPD1-204ENST00000530395 NPHP4O75161 1426 aaPredicted RBP32.41■■■□□ 2.78
SMPD1-204ENST00000530395 IQGAP1P46940 1657 aa32.4■■■□□ 2.78
SMPD1-204ENST00000530395 CPS1P31327 1500 aa32.4■■■□□ 2.78
SMPD1-204ENST00000530395 ADGRL2O95490 1459 aa32.39■■■□□ 2.78
SMPD1-204ENST00000530395 FAM50AQ14320 339 aaKnown RBP32.38■■■□□ 2.77
SMPD1-204ENST00000530395 UBAP1LF5GYI3 381 aa32.36■■■□□ 2.77
SMPD1-204ENST00000530395 VWDEQ8N2E2 1590 aa32.34■■■□□ 2.77
SMPD1-204ENST00000530395 LMTK2Q8IWU2 1503 aa32.34■■■□□ 2.77
SMPD1-204ENST00000530395 PIK3C2BO00750 1634 aa32.28■■■□□ 2.76
SMPD1-204ENST00000530395 SCAF11Q99590 1463 aaKnown RBP32.27■■■□□ 2.76
SMPD1-204ENST00000530395 EFCAB6Q5THR3 1501 aa32.26■■■□□ 2.76
SMPD1-204ENST00000530395 SLIT1O75093 1534 aa32.26■■■□□ 2.75
SMPD1-204ENST00000530395 KDM5AP29375 1690 aaKnown RBP32.24■■■□□ 2.75
SMPD1-204ENST00000530395 ARHGAP23Q9P227 1491 aa32.24■■■□□ 2.75
SMPD1-204ENST00000530395 ANKRD50Q9ULJ7 1429 aa32.24■■■□□ 2.75
SMPD1-204ENST00000530395 DISP3Q9P2K9 1392 aa32.2■■■□□ 2.75
SMPD1-204ENST00000530395 STAG3Q9UJ98 1225 aa32.2■■■□□ 2.75
SMPD1-204ENST00000530395 SYNMO15061 1565 aa32.19■■■□□ 2.74
SMPD1-204ENST00000530395 STRCP1A6NGW2 1772 aa32.18■■■□□ 2.74
SMPD1-204ENST00000530395 EID1Q9Y6B2 187 aa32.18■■■□□ 2.74
SMPD1-204ENST00000530395 TOM1O60784 492 aa32.17■■■□□ 2.74
SMPD1-204ENST00000530395 TXNDC2Q86VQ3 553 aa32.17■■■□□ 2.74
SMPD1-204ENST00000530395 NOS1P29475 1434 aa32.15■■■□□ 2.74
SMPD1-204ENST00000530395 TET3O43151 1660 aa32.15■■■□□ 2.74
SMPD1-204ENST00000530395 LTKP29376 864 aa32.14■■■□□ 2.74
SMPD1-204ENST00000530395 SCAF1Q9H7N4 1312 aaKnown RBP32.14■■■□□ 2.74
SMPD1-204ENST00000530395 TMEM2Q9UHN6 1383 aa32.14■■■□□ 2.74
SMPD1-204ENST00000530395 RPRD2Q5VT52 1461 aaKnown RBP32.14■■■□□ 2.74
SMPD1-204ENST00000530395 UNC13BO14795 1591 aa32.12■■■□□ 2.73
SMPD1-204ENST00000530395 GCC2Q8IWJ2 1684 aa32.11■■■□□ 2.73
SMPD1-204ENST00000530395 ADGRB3O60242 1522 aa32.11■■■□□ 2.73
SMPD1-204ENST00000530395 IDI1Q13907 227 aa32.11■■■□□ 2.73
SMPD1-204ENST00000530395 ROCK1Q13464 1354 aa32.1■■■□□ 2.73
SMPD1-204ENST00000530395 LRRC7Q96NW7 1537 aa32.1■■■□□ 2.73
SMPD1-204ENST00000530395 PIP4K2BP78356 416 aa32.09■■■□□ 2.73
SMPD1-204ENST00000530395 SLC52A1Q9NWF4 448 aa32.07■■■□□ 2.72
SMPD1-204ENST00000530395 IQGAP3Q86VI3 1631 aa32■■■□□ 2.71
SMPD1-204ENST00000530395 ALKQ9UM73 1620 aa32■■■□□ 2.71
SMPD1-204ENST00000530395 PPARGC1BQ86YN6 1023 aaKnown RBP31.99■■■□□ 2.71
SMPD1-204ENST00000530395 MYO5BQ9ULV0 1848 aa31.98■■■□□ 2.71
SMPD1-204ENST00000530395 HSPA1LP34931 641 aa31.98■■■□□ 2.71
SMPD1-204ENST00000530395 ITGAEP38570 1179 aa31.98■■■□□ 2.71
SMPD1-204ENST00000530395 E9PCH4 1651 aa31.97■■■□□ 2.71
SMPD1-204ENST00000530395 XIRP1Q702N8 1843 aaKnown RBP31.94■■■□□ 2.7
SMPD1-204ENST00000530395 TMEM131LA2VDJ0 1609 aa31.92■■■□□ 2.7
SMPD1-204ENST00000530395 ILDR2Q71H61 639 aa31.91■■■□□ 2.7
SMPD1-204ENST00000530395 NUP155O75694 1391 aa31.89■■■□□ 2.7
SMPD1-204ENST00000530395 BCANQ96GW7 911 aa31.88■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms