RNA–Protein interactions for RNA: ENST00000530290.5

CTSB-216, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-216ENST00000530290 CCNB3Q8WWL7 1395 aa9.19□□□□□ -0.94
CTSB-216ENST00000530290 MED14O60244 1454 aa9.19□□□□□ -0.94
CTSB-216ENST00000530290 RNF17Q9BXT8 1623 aaKnown RBP9.19□□□□□ -0.94
CTSB-216ENST00000530290 TNRQ92752 1358 aa9.18□□□□□ -0.94
CTSB-216ENST00000530290 CFDP1Q9UEE9 299 aaPredicted RBP9.18□□□□□ -0.94
CTSB-216ENST00000530290 EHBP1L1Q8N3D4 1523 aa9.17□□□□□ -0.94
CTSB-216ENST00000530290 CHIC1Q5VXU3 224 aa9.17□□□□□ -0.94
CTSB-216ENST00000530290 ZNF777Q9ULD5 760 aaPredicted RBP9.17□□□□□ -0.94
CTSB-216ENST00000530290 IQGAP1P46940 1657 aa9.16□□□□□ -0.94
CTSB-216ENST00000530290 ZC3H13Q5T200 1668 aaKnown RBP9.16□□□□□ -0.94
CTSB-216ENST00000530290 VWDEQ8N2E2 1590 aa9.16□□□□□ -0.94
CTSB-216ENST00000530290 PIP4K2BP78356 416 aa9.16□□□□□ -0.94
CTSB-216ENST00000530290 GGT6Q6P531 493 aa9.16□□□□□ -0.94
CTSB-216ENST00000530290 MTUS2Q5JR59 1369 aa9.15□□□□□ -0.94
CTSB-216ENST00000530290 DHX29Q7Z478 1369 aaKnown RBP9.15□□□□□ -0.94
CTSB-216ENST00000530290 TIAM1Q13009 1591 aa9.15□□□□□ -0.95
CTSB-216ENST00000530290 UGGT1Q9NYU2 1555 aa9.15□□□□□ -0.95
CTSB-216ENST00000530290 CCDC141Q6ZP82 1450 aa9.15□□□□□ -0.95
CTSB-216ENST00000530290 MBD5Q9P267 1494 aa9.15□□□□□ -0.95
CTSB-216ENST00000530290 SCAF1Q9H7N4 1312 aaKnown RBP9.14□□□□□ -0.95
CTSB-216ENST00000530290 HNRNPMP52272 730 aaKnown RBP eCLIP9.14□□□□□ -0.95
CTSB-216ENST00000530290 RSPH4AQ5TD94 716 aa9.14□□□□□ -0.95
CTSB-216ENST00000530290 ANKLE2Q86XL3 938 aa9.14□□□□□ -0.95
CTSB-216ENST00000530290 THEMISQ8N1K5 641 aaPredicted RBP9.14□□□□□ -0.95
CTSB-216ENST00000530290 NPHP4O75161 1426 aaPredicted RBP9.14□□□□□ -0.95
CTSB-216ENST00000530290 CEP162Q5TB80 1403 aa9.14□□□□□ -0.95
CTSB-216ENST00000530290 MIA2Q96PC5 1412 aa9.13□□□□□ -0.95
CTSB-216ENST00000530290 POTEAQ6S8J7 498 aa9.12□□□□□ -0.95
CTSB-216ENST00000530290 EIF2AK4Q9P2K8 1649 aaKnown RBP9.12□□□□□ -0.95
CTSB-216ENST00000530290 ALKQ9UM73 1620 aa9.12□□□□□ -0.95
CTSB-216ENST00000530290 ARHGEF5Q12774 1597 aa9.12□□□□□ -0.95
CTSB-216ENST00000530290 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.1□□□□□ -0.95
CTSB-216ENST00000530290 WASHC2CQ9Y4E1 1318 aa9.09□□□□□ -0.95
CTSB-216ENST00000530290 LRRC7Q96NW7 1537 aa9.09□□□□□ -0.95
CTSB-216ENST00000530290 CAMSAP2Q08AD1 1489 aa9.08□□□□□ -0.96
CTSB-216ENST00000530290 KIF3BO15066 747 aa9.08□□□□□ -0.96
CTSB-216ENST00000530290 MAST1Q9Y2H9 1570 aa9.07□□□□□ -0.96
CTSB-216ENST00000530290 STRCP1A6NGW2 1772 aa9.07□□□□□ -0.96
CTSB-216ENST00000530290 ABCC3O15438 1527 aa9.07□□□□□ -0.96
CTSB-216ENST00000530290 ERVK-7P63135 1459 aa9.07□□□□□ -0.96
CTSB-216ENST00000530290 SCAF11Q99590 1463 aaKnown RBP9.07□□□□□ -0.96
CTSB-216ENST00000530290 KDM5AP29375 1690 aaKnown RBP9.07□□□□□ -0.96
CTSB-216ENST00000530290 SLIT1O75093 1534 aa9.06□□□□□ -0.96
CTSB-216ENST00000530290 UBR1Q8IWV7 1749 aa9.06□□□□□ -0.96
CTSB-216ENST00000530290 LRRC9Q6ZRR7 1453 aa9.06□□□□□ -0.96
CTSB-216ENST00000530290 EHMT2Q96KQ7 1210 aa9.05□□□□□ -0.96
CTSB-216ENST00000530290 NCOA2Q15596 1464 aa9.04□□□□□ -0.96
CTSB-216ENST00000530290 ARHGAP23Q9P227 1491 aa9.04□□□□□ -0.96
CTSB-216ENST00000530290 FBXO31Q5XUX0 539 aaPredicted RBP9.04□□□□□ -0.96
CTSB-216ENST00000530290 UPF1Q92900 1129 aaKnown RBP eCLIP9.04□□□□□ -0.96
CTSB-216ENST00000530290 SENP3Q9H4L4 574 aaPredicted RBP9.04□□□□□ -0.96
CTSB-216ENST00000530290 ARHGAP31Q2M1Z3 1444 aa9.04□□□□□ -0.96
CTSB-216ENST00000530290 FAM135BQ49AJ0 1406 aa9.04□□□□□ -0.96
CTSB-216ENST00000530290 TSPY4P0CV99 314 aa9.03□□□□□ -0.96
CTSB-216ENST00000530290 TSPY10P0CW01 314 aa9.03□□□□□ -0.96
CTSB-216ENST00000530290 XIRP1Q702N8 1843 aaKnown RBP9.03□□□□□ -0.96
CTSB-216ENST00000530290 ZNF644Q9H582 1327 aaPredicted RBP9.03□□□□□ -0.96
CTSB-216ENST00000530290 PRDM15P57071 1507 aaPredicted RBP9.02□□□□□ -0.97
CTSB-216ENST00000530290 SETD1AO15047 1707 aaKnown RBP9.02□□□□□ -0.97
CTSB-216ENST00000530290 CEP152O94986 1710 aa9.02□□□□□ -0.97
CTSB-216ENST00000530290 MROH1Q8NDA8 1641 aa9.02□□□□□ -0.97
CTSB-216ENST00000530290 DUOX2Q9NRD8 1548 aa9.01□□□□□ -0.97
CTSB-216ENST00000530290 CFAP65Q6ZU64 1925 aaKnown RBP9.01□□□□□ -0.97
CTSB-216ENST00000530290 NKTRP30414 1462 aaKnown RBP9.01□□□□□ -0.97
CTSB-216ENST00000530290 SRCAPQ6ZRS2 3230 aa9.01□□□□□ -0.97
CTSB-216ENST00000530290 EID1Q9Y6B2 187 aa9□□□□□ -0.97
CTSB-216ENST00000530290 ERBINQ96RT1 1412 aa8.99□□□□□ -0.97
CTSB-216ENST00000530290 NWD1Q149M9 1564 aa8.99□□□□□ -0.97
CTSB-216ENST00000530290 ROBO1Q9Y6N7 1651 aa8.98□□□□□ -0.97
CTSB-216ENST00000530290 EFCAB6Q5THR3 1501 aa8.97□□□□□ -0.97
CTSB-216ENST00000530290 CROCC2H7BZ55 1655 aa8.97□□□□□ -0.97
CTSB-216ENST00000530290 TMEM2Q9UHN6 1383 aa8.97□□□□□ -0.97
CTSB-216ENST00000530290 MYOM3Q5VTT5 1437 aa8.97□□□□□ -0.97
CTSB-216ENST00000530290 MAP3K1Q13233 1512 aa8.96□□□□□ -0.97
CTSB-216ENST00000530290 PIK3C2BO00750 1634 aa8.96□□□□□ -0.98
CTSB-216ENST00000530290 TXNDC2Q86VQ3 553 aa8.96□□□□□ -0.98
CTSB-216ENST00000530290 LMTK2Q8IWU2 1503 aa8.95□□□□□ -0.98
CTSB-216ENST00000530290 MSH6P52701 1360 aa8.95□□□□□ -0.98
CTSB-216ENST00000530290 TMEM94Q12767 1356 aa8.95□□□□□ -0.98
CTSB-216ENST00000530290 KANK1Q14678 1352 aa8.95□□□□□ -0.98
CTSB-216ENST00000530290 JCADQ9P266 1359 aa8.95□□□□□ -0.98
CTSB-216ENST00000530290 FGD6Q6ZV73 1430 aa8.95□□□□□ -0.98
CTSB-216ENST00000530290 ADGRB3O60242 1522 aa8.95□□□□□ -0.98
CTSB-216ENST00000530290 PHLPP1O60346 1717 aa8.94□□□□□ -0.98
CTSB-216ENST00000530290 KCNA6P17658 529 aa8.94□□□□□ -0.98
CTSB-216ENST00000530290 NCOA3Q9Y6Q9 1424 aa8.94□□□□□ -0.98
CTSB-216ENST00000530290 LTKP29376 864 aa8.93□□□□□ -0.98
CTSB-216ENST00000530290 KIF15Q9NS87 1388 aa8.93□□□□□ -0.98
CTSB-216ENST00000530290 TET3O43151 1660 aa8.93□□□□□ -0.98
CTSB-216ENST00000530290 RPRD2Q5VT52 1461 aaKnown RBP8.92□□□□□ -0.98
CTSB-216ENST00000530290 STAG3Q9UJ98 1225 aa8.92□□□□□ -0.98
CTSB-216ENST00000530290 SHPRHQ149N8 1683 aa8.91□□□□□ -0.98
CTSB-216ENST00000530290 VPS8Q8N3P4 1428 aa8.91□□□□□ -0.98
CTSB-216ENST00000530290 SPATA31A6Q5VVP1 1343 aa8.91□□□□□ -0.98
CTSB-216ENST00000530290 CHD2O14647 1828 aaKnown RBP8.91□□□□□ -0.98
CTSB-216ENST00000530290 COL16A1Q07092 1604 aaPredicted RBP8.91□□□□□ -0.98
CTSB-216ENST00000530290 DIP2AQ14689 1571 aa8.9□□□□□ -0.98
CTSB-216ENST00000530290 CDK12Q9NYV4 1490 aaPredicted RBP8.9□□□□□ -0.98
CTSB-216ENST00000530290 ZNF772Q68DY9 489 aaPredicted RBP8.9□□□□□ -0.98
CTSB-216ENST00000530290 AHDC1Q5TGY3 1603 aaPredicted RBP8.9□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms