RNA–Protein interactions for RNA: ENST00000530141.5

CMTM1-214, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 880 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-214ENST00000530141 ARHGAP5Q13017 1502 aa12.25□□□□□ -0.45
CMTM1-214ENST00000530141 UBAP1LF5GYI3 381 aa12.24□□□□□ -0.45
CMTM1-214ENST00000530141 SLC24A1O60721 1099 aa12.24□□□□□ -0.45
CMTM1-214ENST00000530141 SUPT6HQ7KZ85 1726 aaKnown RBP12.24□□□□□ -0.45
CMTM1-214ENST00000530141 CCER1Q8TC90 406 aaPredicted RBP12.24□□□□□ -0.45
CMTM1-214ENST00000530141 IQSEC2Q5JU85 1478 aa12.23□□□□□ -0.45
CMTM1-214ENST00000530141 NCKAP5LQ9HCH0 1330 aa12.23□□□□□ -0.45
CMTM1-214ENST00000530141 CDK11AQ9UQ88 783 aaPredicted RBP12.23□□□□□ -0.45
CMTM1-214ENST00000530141 CDC42BPBQ9Y5S2 1711 aa12.23□□□□□ -0.45
CMTM1-214ENST00000530141 ZNF518AQ6AHZ1 1483 aa12.22□□□□□ -0.45
CMTM1-214ENST00000530141 ITSN2Q9NZM3 1697 aa12.22□□□□□ -0.45
CMTM1-214ENST00000530141 MYO3AQ8NEV4 1616 aa12.22□□□□□ -0.45
CMTM1-214ENST00000530141 REREQ9P2R6 1566 aa12.21□□□□□ -0.46
CMTM1-214ENST00000530141 KIDINS220Q9ULH0 1771 aa12.2□□□□□ -0.46
CMTM1-214ENST00000530141 TRAPPC8Q9Y2L5 1435 aa12.2□□□□□ -0.46
CMTM1-214ENST00000530141 CLTCQ00610 1675 aaKnown RBP12.19□□□□□ -0.46
CMTM1-214ENST00000530141 ABCC1P33527 1531 aa12.18□□□□□ -0.46
CMTM1-214ENST00000530141 ZNF142P52746 1687 aaPredicted RBP12.18□□□□□ -0.46
CMTM1-214ENST00000530141 HSPA1LP34931 641 aa12.17□□□□□ -0.46
CMTM1-214ENST00000530141 EFCAB2Q5VUJ9 269 aa12.17□□□□□ -0.46
CMTM1-214ENST00000530141 PREX2Q70Z35 1606 aa12.17□□□□□ -0.46
CMTM1-214ENST00000530141 MROH2AA6NES4 1674 aa12.16□□□□□ -0.46
CMTM1-214ENST00000530141 NCOA2Q15596 1464 aa12.16□□□□□ -0.46
CMTM1-214ENST00000530141 PIP4K2BP78356 416 aa12.16□□□□□ -0.46
CMTM1-214ENST00000530141 MYOM3Q5VTT5 1437 aa12.16□□□□□ -0.46
CMTM1-214ENST00000530141 AGLP35573 1532 aa12.16□□□□□ -0.46
CMTM1-214ENST00000530141 CLSPNQ9HAW4 1339 aa12.15□□□□□ -0.46
CMTM1-214ENST00000530141 CEP170BQ9Y4F5 1589 aaPredicted RBP12.15□□□□□ -0.46
CMTM1-214ENST00000530141 FGD6Q6ZV73 1430 aa12.15□□□□□ -0.46
CMTM1-214ENST00000530141 AKT1S1Q96B36 256 aa12.15□□□□□ -0.46
CMTM1-214ENST00000530141 FAM50AQ14320 339 aaKnown RBP12.14□□□□□ -0.47
CMTM1-214ENST00000530141 ESF1Q9H501 851 aaKnown RBP12.14□□□□□ -0.47
CMTM1-214ENST00000530141 MLH3Q9UHC1 1453 aa12.14□□□□□ -0.47
CMTM1-214ENST00000530141 MIA2Q96PC5 1412 aa12.13□□□□□ -0.47
CMTM1-214ENST00000530141 SPDYE2BA6NHP3 402 aa12.13□□□□□ -0.47
CMTM1-214ENST00000530141 SPDYE6P0CI01 402 aa12.13□□□□□ -0.47
CMTM1-214ENST00000530141 SPDYE2Q495Y8 402 aa12.13□□□□□ -0.47
CMTM1-214ENST00000530141 CDC42BPAQ5VT25 1732 aa12.13□□□□□ -0.47
CMTM1-214ENST00000530141 TROQ12816 1431 aaPredicted RBP12.12□□□□□ -0.47
CMTM1-214ENST00000530141 ALKQ9UM73 1620 aa12.11□□□□□ -0.47
CMTM1-214ENST00000530141 TCOF1Q13428 1488 aaKnown RBP12.11□□□□□ -0.47
CMTM1-214ENST00000530141 POLR1AO95602 1720 aaPredicted RBP12.11□□□□□ -0.47
CMTM1-214ENST00000530141 SAMD9LQ8IVG5 1584 aa12.1□□□□□ -0.47
CMTM1-214ENST00000530141 SYCP2Q9BX26 1530 aa12.1□□□□□ -0.47
CMTM1-214ENST00000530141 NEURL4Q96JN8 1562 aa12.09□□□□□ -0.47
CMTM1-214ENST00000530141 NPATQ14207 1427 aa12.09□□□□□ -0.47
CMTM1-214ENST00000530141 CNTLNQ9NXG0 1405 aa12.09□□□□□ -0.47
CMTM1-214ENST00000530141 ACIN1Q9UKV3 1341 aaKnown RBP12.09□□□□□ -0.47
CMTM1-214ENST00000530141 ZMYM3Q14202 1370 aa12.08□□□□□ -0.48
CMTM1-214ENST00000530141 SETD5Q9C0A6 1442 aa12.08□□□□□ -0.48
CMTM1-214ENST00000530141 PLA2R1Q13018 1463 aa12.08□□□□□ -0.48
CMTM1-214ENST00000530141 PTPRKQ15262 1439 aa12.07□□□□□ -0.48
CMTM1-214ENST00000530141 ITGAEP38570 1179 aa12.06□□□□□ -0.48
CMTM1-214ENST00000530141 DNMT1P26358 1616 aaKnown RBP12.06□□□□□ -0.48
CMTM1-214ENST00000530141 PTPN23Q9H3S7 1636 aa12.06□□□□□ -0.48
CMTM1-214ENST00000530141 PLXNC1O60486 1568 aa12.05□□□□□ -0.48
CMTM1-214ENST00000530141 STRCP1A6NGW2 1772 aa12.05□□□□□ -0.48
CMTM1-214ENST00000530141 INO80Q9ULG1 1556 aaPredicted RBP12.05□□□□□ -0.48
CMTM1-214ENST00000530141 ZNF777Q9ULD5 760 aaPredicted RBP12.04□□□□□ -0.48
CMTM1-214ENST00000530141 ATP7AQ04656 1500 aa12.04□□□□□ -0.48
CMTM1-214ENST00000530141 SETD1AO15047 1707 aaKnown RBP12.03□□□□□ -0.48
CMTM1-214ENST00000530141 ZNF692Q9BU19 519 aaPredicted RBP12.03□□□□□ -0.48
CMTM1-214ENST00000530141 VWDEQ8N2E2 1590 aa12.03□□□□□ -0.48
CMTM1-214ENST00000530141 DHX57Q6P158 1386 aaKnown RBP12.03□□□□□ -0.48
CMTM1-214ENST00000530141 RAB3GAP2Q9H2M9 1393 aa12.03□□□□□ -0.48
CMTM1-214ENST00000530141 REM2Q8IYK8 340 aaPredicted RBP12.02□□□□□ -0.49
CMTM1-214ENST00000530141 SHANK2Q9UPX8 1470 aa12.02□□□□□ -0.49
CMTM1-214ENST00000530141 PKD2Q13563 968 aa12.01□□□□□ -0.49
CMTM1-214ENST00000530141 GGT6Q6P531 493 aa12.01□□□□□ -0.49
CMTM1-214ENST00000530141 HFM1A2PYH4 1435 aa12.01□□□□□ -0.49
CMTM1-214ENST00000530141 CPS1P31327 1500 aa12.01□□□□□ -0.49
CMTM1-214ENST00000530141 HNRNPMP52272 730 aaKnown RBP eCLIP12□□□□□ -0.49
CMTM1-214ENST00000530141 SSUH2Q9Y2M2 353 aa12□□□□□ -0.49
CMTM1-214ENST00000530141 A2ML1A8K2U0 1454 aa12□□□□□ -0.49
CMTM1-214ENST00000530141 A2MP01023 1474 aa12□□□□□ -0.49
CMTM1-214ENST00000530141 SPAG9O60271 1321 aaKnown RBP11.98□□□□□ -0.49
CMTM1-214ENST00000530141 CFDP1Q9UEE9 299 aaPredicted RBP11.98□□□□□ -0.49
CMTM1-214ENST00000530141 ADGBQ8N7X0 1667 aa11.97□□□□□ -0.49
CMTM1-214ENST00000530141 ROCK1Q13464 1354 aa11.97□□□□□ -0.49
CMTM1-214ENST00000530141 TOM1O60784 492 aa11.97□□□□□ -0.49
CMTM1-214ENST00000530141 FBXO31Q5XUX0 539 aaPredicted RBP11.97□□□□□ -0.49
CMTM1-214ENST00000530141 RGS17Q9UGC6 210 aaPredicted RBP11.97□□□□□ -0.49
CMTM1-214ENST00000530141 RNF17Q9BXT8 1623 aaKnown RBP11.96□□□□□ -0.5
CMTM1-214ENST00000530141 GPATCH8Q9UKJ3 1502 aaKnown RBP11.96□□□□□ -0.5
CMTM1-214ENST00000530141 IQGAP1P46940 1657 aa11.95□□□□□ -0.5
CMTM1-214ENST00000530141 DAPK1P53355 1430 aa11.94□□□□□ -0.5
CMTM1-214ENST00000530141 NAIPQ13075 1403 aa11.93□□□□□ -0.5
CMTM1-214ENST00000530141 XIRP1Q702N8 1843 aaKnown RBP11.93□□□□□ -0.5
CMTM1-214ENST00000530141 TNRQ92752 1358 aa11.92□□□□□ -0.5
CMTM1-214ENST00000530141 LRRC7Q96NW7 1537 aa11.92□□□□□ -0.5
CMTM1-214ENST00000530141 CAMSAP2Q08AD1 1489 aa11.92□□□□□ -0.5
CMTM1-214ENST00000530141 RSPH4AQ5TD94 716 aa11.92□□□□□ -0.5
CMTM1-214ENST00000530141 CHRDL2Q6WN34 429 aa11.92□□□□□ -0.5
CMTM1-214ENST00000530141 NPHP4O75161 1426 aaPredicted RBP11.92□□□□□ -0.5
CMTM1-214ENST00000530141 TIMELESSQ9UNS1 1208 aa11.91□□□□□ -0.5
CMTM1-214ENST00000530141 ABCC5O15440 1437 aa11.91□□□□□ -0.5
CMTM1-214ENST00000530141 GCC2Q8IWJ2 1684 aa11.91□□□□□ -0.5
CMTM1-214ENST00000530141 ZNF644Q9H582 1327 aaPredicted RBP11.9□□□□□ -0.5
CMTM1-214ENST00000530141 SYNMO15061 1565 aa11.9□□□□□ -0.5
CMTM1-214ENST00000530141 POTEAQ6S8J7 498 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms