RNA–Protein interactions for RNA: ENST00000529928.1

COL16A1-216, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-216ENST00000529928 CCDC141Q6ZP82 1450 aa25.85■■□□□ 1.73
COL16A1-216ENST00000529928 KDM5DQ9BY66 1539 aa25.83■■□□□ 1.73
COL16A1-216ENST00000529928 TNRQ92752 1358 aa25.83■■□□□ 1.73
COL16A1-216ENST00000529928 KIF3BO15066 747 aa25.83■■□□□ 1.73
COL16A1-216ENST00000529928 PZPP20742 1482 aa25.82■■□□□ 1.72
COL16A1-216ENST00000529928 POLR1AO95602 1720 aaPredicted RBP25.81■■□□□ 1.72
COL16A1-216ENST00000529928 RSPH4AQ5TD94 716 aa25.81■■□□□ 1.72
COL16A1-216ENST00000529928 CAMSAP2Q08AD1 1489 aa25.79■■□□□ 1.72
COL16A1-216ENST00000529928 FBXO31Q5XUX0 539 aaPredicted RBP25.79■■□□□ 1.72
COL16A1-216ENST00000529928 NCOA2Q15596 1464 aa25.79■■□□□ 1.72
COL16A1-216ENST00000529928 WASHC2CQ9Y4E1 1318 aa25.78■■□□□ 1.72
COL16A1-216ENST00000529928 CPS1P31327 1500 aa25.78■■□□□ 1.72
COL16A1-216ENST00000529928 NEURL4Q96JN8 1562 aa25.78■■□□□ 1.72
COL16A1-216ENST00000529928 NLRP1Q9C000 1473 aa25.73■■□□□ 1.71
COL16A1-216ENST00000529928 SHANK2Q9UPX8 1470 aa25.73■■□□□ 1.71
COL16A1-216ENST00000529928 ANKLE2Q86XL3 938 aa25.73■■□□□ 1.71
COL16A1-216ENST00000529928 MIA2Q96PC5 1412 aa25.72■■□□□ 1.71
COL16A1-216ENST00000529928 TOM1O60784 492 aa25.72■■□□□ 1.71
COL16A1-216ENST00000529928 THEMISQ8N1K5 641 aaPredicted RBP25.72■■□□□ 1.71
COL16A1-216ENST00000529928 ARHGEF5Q12774 1597 aa25.72■■□□□ 1.71
COL16A1-216ENST00000529928 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.71■■□□□ 1.71
COL16A1-216ENST00000529928 SCAF1Q9H7N4 1312 aaKnown RBP25.7■■□□□ 1.71
COL16A1-216ENST00000529928 TSPY4P0CV99 314 aa25.7■■□□□ 1.7
COL16A1-216ENST00000529928 TSPY10P0CW01 314 aa25.7■■□□□ 1.7
COL16A1-216ENST00000529928 UGGT1Q9NYU2 1555 aa25.69■■□□□ 1.7
COL16A1-216ENST00000529928 PIP4K2BP78356 416 aa25.68■■□□□ 1.7
COL16A1-216ENST00000529928 HSPA1LP34931 641 aa25.67■■□□□ 1.7
COL16A1-216ENST00000529928 DEPDC5O75140 1603 aa25.66■■□□□ 1.7
COL16A1-216ENST00000529928 MED14O60244 1454 aa25.66■■□□□ 1.7
COL16A1-216ENST00000529928 NPHP4O75161 1426 aaPredicted RBP25.65■■□□□ 1.7
COL16A1-216ENST00000529928 VWDEQ8N2E2 1590 aa25.65■■□□□ 1.7
COL16A1-216ENST00000529928 RNF17Q9BXT8 1623 aaKnown RBP25.63■■□□□ 1.69
COL16A1-216ENST00000529928 ZC3H13Q5T200 1668 aaKnown RBP25.61■■□□□ 1.69
COL16A1-216ENST00000529928 MED1Q15648 1581 aaPredicted RBP25.61■■□□□ 1.69
COL16A1-216ENST00000529928 MAST1Q9Y2H9 1570 aa25.61■■□□□ 1.69
COL16A1-216ENST00000529928 ABCC3O15438 1527 aa25.59■■□□□ 1.69
COL16A1-216ENST00000529928 IQGAP1P46940 1657 aa25.59■■□□□ 1.69
COL16A1-216ENST00000529928 EIF2AK4Q9P2K8 1649 aaKnown RBP25.58■■□□□ 1.69
COL16A1-216ENST00000529928 LRRC9Q6ZRR7 1453 aa25.58■■□□□ 1.69
COL16A1-216ENST00000529928 ERVK-7P63135 1459 aa25.54■■□□□ 1.68
COL16A1-216ENST00000529928 VPS8Q8N3P4 1428 aa25.53■■□□□ 1.68
COL16A1-216ENST00000529928 ALKQ9UM73 1620 aa25.52■■□□□ 1.68
COL16A1-216ENST00000529928 MROH1Q8NDA8 1641 aa25.51■■□□□ 1.67
COL16A1-216ENST00000529928 SYNMO15061 1565 aa25.5■■□□□ 1.67
COL16A1-216ENST00000529928 LRRC7Q96NW7 1537 aa25.49■■□□□ 1.67
COL16A1-216ENST00000529928 MYOM3Q5VTT5 1437 aa25.47■■□□□ 1.67
COL16A1-216ENST00000529928 STRCP1A6NGW2 1772 aa25.47■■□□□ 1.67
COL16A1-216ENST00000529928 MAP3K1Q13233 1512 aa25.47■■□□□ 1.67
COL16A1-216ENST00000529928 DUOX2Q9NRD8 1548 aa25.47■■□□□ 1.67
COL16A1-216ENST00000529928 CEP152O94986 1710 aa25.46■■□□□ 1.67
COL16A1-216ENST00000529928 UBR1Q8IWV7 1749 aa25.46■■□□□ 1.67
COL16A1-216ENST00000529928 PHF23Q9BUL5 403 aaPredicted RBP25.45■■□□□ 1.66
COL16A1-216ENST00000529928 SCAF11Q99590 1463 aaKnown RBP25.45■■□□□ 1.66
COL16A1-216ENST00000529928 KANK4Q5T7N3 995 aaPredicted RBP25.43■■□□□ 1.66
COL16A1-216ENST00000529928 ARHGAP31Q2M1Z3 1444 aa25.41■■□□□ 1.66
COL16A1-216ENST00000529928 PRDM15P57071 1507 aaPredicted RBP25.41■■□□□ 1.66
COL16A1-216ENST00000529928 ARHGAP23Q9P227 1491 aa25.4■■□□□ 1.66
COL16A1-216ENST00000529928 SLIT1O75093 1534 aa25.4■■□□□ 1.66
COL16A1-216ENST00000529928 CFAP65Q6ZU64 1925 aaKnown RBP25.39■■□□□ 1.65
COL16A1-216ENST00000529928 ERBINQ96RT1 1412 aa25.38■■□□□ 1.65
COL16A1-216ENST00000529928 KIF15Q9NS87 1388 aa25.38■■□□□ 1.65
COL16A1-216ENST00000529928 TXNDC2Q86VQ3 553 aa25.37■■□□□ 1.65
COL16A1-216ENST00000529928 LTKP29376 864 aa25.36■■□□□ 1.65
COL16A1-216ENST00000529928 SENP3Q9H4L4 574 aaPredicted RBP25.35■■□□□ 1.65
COL16A1-216ENST00000529928 EID1Q9Y6B2 187 aa25.35■■□□□ 1.65
COL16A1-216ENST00000529928 CROCC2H7BZ55 1655 aa25.33■■□□□ 1.65
COL16A1-216ENST00000529928 RRP7BPQ9NSQ0 103 aa25.32■■□□□ 1.64
COL16A1-216ENST00000529928 ABCC5O15440 1437 aa25.31■■□□□ 1.64
COL16A1-216ENST00000529928 LOC105371045A0A1W2PR82 267 aa25.31■■□□□ 1.64
COL16A1-216ENST00000529928 PIK3C2BO00750 1634 aa25.3■■□□□ 1.64
COL16A1-216ENST00000529928 KANK1Q14678 1352 aa25.3■■□□□ 1.64
COL16A1-216ENST00000529928 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.29■■□□□ 1.64
COL16A1-216ENST00000529928 TMEM2Q9UHN6 1383 aa25.29■■□□□ 1.64
COL16A1-216ENST00000529928 PTPN23Q9H3S7 1636 aa25.28■■□□□ 1.64
COL16A1-216ENST00000529928 STAG3Q9UJ98 1225 aa25.28■■□□□ 1.64
COL16A1-216ENST00000529928 DAPK1P53355 1430 aa25.27■■□□□ 1.64
COL16A1-216ENST00000529928 XIRP1Q702N8 1843 aaKnown RBP25.26■■□□□ 1.63
COL16A1-216ENST00000529928 KDM5AP29375 1690 aaKnown RBP25.26■■□□□ 1.63
COL16A1-216ENST00000529928 EFCAB6Q5THR3 1501 aa25.24■■□□□ 1.63
COL16A1-216ENST00000529928 LMTK2Q8IWU2 1503 aa25.23■■□□□ 1.63
COL16A1-216ENST00000529928 FAM135BQ49AJ0 1406 aa25.22■■□□□ 1.63
COL16A1-216ENST00000529928 APLP2Q06481 763 aa25.22■■□□□ 1.63
COL16A1-216ENST00000529928 ANKRD30AQ9BXX3 1397 aa25.2■■□□□ 1.63
COL16A1-216ENST00000529928 IDI1Q13907 227 aa25.2■■□□□ 1.62
COL16A1-216ENST00000529928 FGD6Q6ZV73 1430 aa25.2■■□□□ 1.62
COL16A1-216ENST00000529928 TMEM94Q12767 1356 aa25.19■■□□□ 1.62
COL16A1-216ENST00000529928 KCNA6P17658 529 aa25.18■■□□□ 1.62
COL16A1-216ENST00000529928 RGS17Q9UGC6 210 aaPredicted RBP25.16■■□□□ 1.62
COL16A1-216ENST00000529928 TET3O43151 1660 aa25.16■■□□□ 1.62
COL16A1-216ENST00000529928 NOS1P29475 1434 aa25.15■■□□□ 1.62
COL16A1-216ENST00000529928 CHIC2Q9UKJ5 165 aa25.15■■□□□ 1.62
COL16A1-216ENST00000529928 ADGRB3O60242 1522 aa25.14■■□□□ 1.62
COL16A1-216ENST00000529928 SLC26A8Q96RN1 970 aa25.14■■□□□ 1.62
COL16A1-216ENST00000529928 PROSER2Q86WR7 435 aaPredicted RBP25.13■■□□□ 1.61
COL16A1-216ENST00000529928 SLC52A1Q9NWF4 448 aa25.12■■□□□ 1.61
COL16A1-216ENST00000529928 NKTRP30414 1462 aaKnown RBP25.12■■□□□ 1.61
COL16A1-216ENST00000529928 ROBO1Q9Y6N7 1651 aa25.1■■□□□ 1.61
COL16A1-216ENST00000529928 NWD1Q149M9 1564 aa25.1■■□□□ 1.61
COL16A1-216ENST00000529928 ADGRL2O95490 1459 aa25.08■■□□□ 1.6
COL16A1-216ENST00000529928 RPRD2Q5VT52 1461 aaKnown RBP25.07■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms