RNA–Protein interactions for RNA: ENST00000529724.1

PPP1CA-206, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 2

Gene PPP1CA, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-206ENST00000529724 CDC42BPAQ5VT25 1732 aa17.7■□□□□ 0.42
PPP1CA-206ENST00000529724 FBXO31Q5XUX0 539 aaPredicted RBP17.7■□□□□ 0.42
PPP1CA-206ENST00000529724 ARHGAP35Q9NRY4 1499 aa17.68■□□□□ 0.42
PPP1CA-206ENST00000529724 HNRNPMP52272 730 aaKnown RBP eCLIP17.67■□□□□ 0.42
PPP1CA-206ENST00000529724 SRCAPQ6ZRS2 3230 aa17.67■□□□□ 0.42
PPP1CA-206ENST00000529724 IQGAP1P46940 1657 aa17.67■□□□□ 0.42
PPP1CA-206ENST00000529724 EEA1Q15075 1411 aa17.65■□□□□ 0.42
PPP1CA-206ENST00000529724 PZPP20742 1482 aa17.65■□□□□ 0.42
PPP1CA-206ENST00000529724 THEMISQ8N1K5 641 aaPredicted RBP17.65■□□□□ 0.42
PPP1CA-206ENST00000529724 ZNF777Q9ULD5 760 aaPredicted RBP17.65■□□□□ 0.42
PPP1CA-206ENST00000529724 UGGT1Q9NYU2 1555 aa17.63■□□□□ 0.41
PPP1CA-206ENST00000529724 UPF1Q92900 1129 aaKnown RBP eCLIP17.63■□□□□ 0.41
PPP1CA-206ENST00000529724 FAM135BQ49AJ0 1406 aa17.62■□□□□ 0.41
PPP1CA-206ENST00000529724 KIAA1107Q9UPP5 1409 aa17.62■□□□□ 0.41
PPP1CA-206ENST00000529724 NLRP1Q9C000 1473 aa17.62■□□□□ 0.41
PPP1CA-206ENST00000529724 FAM135AQ9P2D6 1515 aa17.62■□□□□ 0.41
PPP1CA-206ENST00000529724 MIA2Q96PC5 1412 aa17.61■□□□□ 0.41
PPP1CA-206ENST00000529724 GPATCH8Q9UKJ3 1502 aaKnown RBP17.61■□□□□ 0.41
PPP1CA-206ENST00000529724 ADGBQ8N7X0 1667 aa17.6■□□□□ 0.41
PPP1CA-206ENST00000529724 XIRP1Q702N8 1843 aaKnown RBP17.58■□□□□ 0.41
PPP1CA-206ENST00000529724 ZC3H13Q5T200 1668 aaKnown RBP17.58■□□□□ 0.4
PPP1CA-206ENST00000529724 KDM5DQ9BY66 1539 aa17.57■□□□□ 0.4
PPP1CA-206ENST00000529724 CCDC18Q5T9S5 1454 aa17.56■□□□□ 0.4
PPP1CA-206ENST00000529724 PLEKHH2Q8IVE3 1493 aa17.56■□□□□ 0.4
PPP1CA-206ENST00000529724 DHX29Q7Z478 1369 aaKnown RBP17.53■□□□□ 0.4
PPP1CA-206ENST00000529724 CASKIN1Q8WXD9 1431 aa17.51■□□□□ 0.39
PPP1CA-206ENST00000529724 ROBO1Q9Y6N7 1651 aa17.51■□□□□ 0.39
PPP1CA-206ENST00000529724 KIF3BO15066 747 aa17.49■□□□□ 0.39
PPP1CA-206ENST00000529724 CFDP1Q9UEE9 299 aaPredicted RBP17.49■□□□□ 0.39
PPP1CA-206ENST00000529724 WASHC2CQ9Y4E1 1318 aa17.48■□□□□ 0.39
PPP1CA-206ENST00000529724 RTEL1-TNFRSF6BF6WH68 1400 aa17.47■□□□□ 0.39
PPP1CA-206ENST00000529724 MBD5Q9P267 1494 aa17.47■□□□□ 0.39
PPP1CA-206ENST00000529724 SCAF11Q99590 1463 aaKnown RBP17.46■□□□□ 0.39
PPP1CA-206ENST00000529724 UBTFP17480 764 aaKnown RBP17.46■□□□□ 0.39
PPP1CA-206ENST00000529724 TRIM52Q96A61 297 aa17.45■□□□□ 0.38
PPP1CA-206ENST00000529724 ZNF644Q9H582 1327 aaPredicted RBP17.45■□□□□ 0.38
PPP1CA-206ENST00000529724 TMEM94Q12767 1356 aa17.44■□□□□ 0.38
PPP1CA-206ENST00000529724 JCADQ9P266 1359 aa17.44■□□□□ 0.38
PPP1CA-206ENST00000529724 EHMT2Q96KQ7 1210 aa17.44■□□□□ 0.38
PPP1CA-206ENST00000529724 LRP6O75581 1613 aa17.43■□□□□ 0.38
PPP1CA-206ENST00000529724 MAP3K1Q13233 1512 aa17.43■□□□□ 0.38
PPP1CA-206ENST00000529724 LTKP29376 864 aa17.43■□□□□ 0.38
PPP1CA-206ENST00000529724 NCOA2Q15596 1464 aa17.42■□□□□ 0.38
PPP1CA-206ENST00000529724 ARHGAP23Q9P227 1491 aa17.42■□□□□ 0.38
PPP1CA-206ENST00000529724 CCNB3Q8WWL7 1395 aa17.41■□□□□ 0.38
PPP1CA-206ENST00000529724 LRRC9Q6ZRR7 1453 aa17.41■□□□□ 0.38
PPP1CA-206ENST00000529724 UBR1Q8IWV7 1749 aa17.41■□□□□ 0.38
PPP1CA-206ENST00000529724 ERVK-7P63135 1459 aa17.4■□□□□ 0.38
PPP1CA-206ENST00000529724 SLIT1O75093 1534 aa17.4■□□□□ 0.38
PPP1CA-206ENST00000529724 PHLPP1O60346 1717 aa17.39■□□□□ 0.37
PPP1CA-206ENST00000529724 ZNF772Q68DY9 489 aaPredicted RBP17.39■□□□□ 0.37
PPP1CA-206ENST00000529724 FYCO1Q9BQS8 1478 aa17.38■□□□□ 0.37
PPP1CA-206ENST00000529724 TXNDC2Q86VQ3 553 aa17.37■□□□□ 0.37
PPP1CA-206ENST00000529724 CDK12Q9NYV4 1490 aaPredicted RBP17.37■□□□□ 0.37
PPP1CA-206ENST00000529724 ABCC3O15438 1527 aa17.37■□□□□ 0.37
PPP1CA-206ENST00000529724 COL16A1Q07092 1604 aaPredicted RBP17.36■□□□□ 0.37
PPP1CA-206ENST00000529724 RBM33Q96EV2 1170 aaKnown RBP17.35■□□□□ 0.37
PPP1CA-206ENST00000529724 RXRBP28702 533 aa17.34■□□□□ 0.37
PPP1CA-206ENST00000529724 TIAM1Q13009 1591 aa17.33■□□□□ 0.37
PPP1CA-206ENST00000529724 SPATA31A6Q5VVP1 1343 aa17.33■□□□□ 0.36
PPP1CA-206ENST00000529724 KCNA6P17658 529 aa17.33■□□□□ 0.36
PPP1CA-206ENST00000529724 PRDM15P57071 1507 aaPredicted RBP17.31■□□□□ 0.36
PPP1CA-206ENST00000529724 MEX3CQ5U5Q3 659 aaKnown RBP17.31■□□□□ 0.36
PPP1CA-206ENST00000529724 PROSER2Q86WR7 435 aaPredicted RBP17.31■□□□□ 0.36
PPP1CA-206ENST00000529724 SLAIN2Q9P270 581 aa17.31■□□□□ 0.36
PPP1CA-206ENST00000529724 CCDC141Q6ZP82 1450 aa17.31■□□□□ 0.36
PPP1CA-206ENST00000529724 FGD6Q6ZV73 1430 aa17.3■□□□□ 0.36
PPP1CA-206ENST00000529724 CHIC1Q5VXU3 224 aa17.29■□□□□ 0.36
PPP1CA-206ENST00000529724 EID1Q9Y6B2 187 aa17.28■□□□□ 0.36
PPP1CA-206ENST00000529724 MSH6P52701 1360 aa17.28■□□□□ 0.36
PPP1CA-206ENST00000529724 NKTRP30414 1462 aaKnown RBP17.27■□□□□ 0.36
PPP1CA-206ENST00000529724 CAMSAP2Q08AD1 1489 aa17.27■□□□□ 0.36
PPP1CA-206ENST00000529724 NWD1Q149M9 1564 aa17.27■□□□□ 0.35
PPP1CA-206ENST00000529724 TMEM2Q9UHN6 1383 aa17.27■□□□□ 0.35
PPP1CA-206ENST00000529724 MROH1Q8NDA8 1641 aa17.26■□□□□ 0.35
PPP1CA-206ENST00000529724 RGS12O14924 1447 aa17.26■□□□□ 0.35
PPP1CA-206ENST00000529724 TET3O43151 1660 aa17.26■□□□□ 0.35
PPP1CA-206ENST00000529724 CFAP65Q6ZU64 1925 aaKnown RBP17.25■□□□□ 0.35
PPP1CA-206ENST00000529724 SHPRHQ149N8 1683 aa17.25■□□□□ 0.35
PPP1CA-206ENST00000529724 MTUS2Q5JR59 1369 aa17.25■□□□□ 0.35
PPP1CA-206ENST00000529724 SLC26A8Q96RN1 970 aa17.23■□□□□ 0.35
PPP1CA-206ENST00000529724 SETBP1Q9Y6X0 1596 aa17.23■□□□□ 0.35
PPP1CA-206ENST00000529724 PIK3C2BO00750 1634 aa17.21■□□□□ 0.35
PPP1CA-206ENST00000529724 AHDC1Q5TGY3 1603 aaPredicted RBP17.21■□□□□ 0.35
PPP1CA-206ENST00000529724 CEP152O94986 1710 aa17.21■□□□□ 0.35
PPP1CA-206ENST00000529724 AFF2P51816 1311 aa17.21■□□□□ 0.34
PPP1CA-206ENST00000529724 RSPH4AQ5TD94 716 aa17.2■□□□□ 0.34
PPP1CA-206ENST00000529724 KDM5AP29375 1690 aaKnown RBP17.2■□□□□ 0.34
PPP1CA-206ENST00000529724 DIP2AQ14689 1571 aa17.19■□□□□ 0.34
PPP1CA-206ENST00000529724 ARHGAP31Q2M1Z3 1444 aa17.18■□□□□ 0.34
PPP1CA-206ENST00000529724 CEP162Q5TB80 1403 aa17.18■□□□□ 0.34
PPP1CA-206ENST00000529724 EIF2AK4Q9P2K8 1649 aaKnown RBP17.18■□□□□ 0.34
PPP1CA-206ENST00000529724 ARHGEF5Q12774 1597 aa17.17■□□□□ 0.34
PPP1CA-206ENST00000529724 ZRANB1Q9UGI0 708 aa17.17■□□□□ 0.34
PPP1CA-206ENST00000529724 EHBP1L1Q8N3D4 1523 aa17.16■□□□□ 0.34
PPP1CA-206ENST00000529724 EFCAB6Q5THR3 1501 aa17.16■□□□□ 0.34
PPP1CA-206ENST00000529724 NUTM2BA6NNL0 878 aaPredicted RBP17.15■□□□□ 0.34
PPP1CA-206ENST00000529724 NUTM2EB1AL46 878 aaPredicted RBP17.15■□□□□ 0.34
PPP1CA-206ENST00000529724 RBM6P78332 1123 aaKnown RBP17.15■□□□□ 0.34
PPP1CA-206ENST00000529724 NUTM2AQ8IVF1 878 aaPredicted RBP17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms