RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 GGT6Q6P531 493 aa14.62□□□□□ -0.07
VPS11-203ENST00000529545 KIAA1107Q9UPP5 1409 aa14.62□□□□□ -0.07
VPS11-203ENST00000529545 A2MP01023 1474 aa14.62□□□□□ -0.07
VPS11-203ENST00000529545 PLA2R1Q13018 1463 aa14.62□□□□□ -0.07
VPS11-203ENST00000529545 ZNF142P52746 1687 aaPredicted RBP14.61□□□□□ -0.07
VPS11-203ENST00000529545 MYO3AQ8NEV4 1616 aa14.61□□□□□ -0.07
VPS11-203ENST00000529545 CCNB3Q8WWL7 1395 aa14.6□□□□□ -0.07
VPS11-203ENST00000529545 CEP170BQ9Y4F5 1589 aaPredicted RBP14.6□□□□□ -0.07
VPS11-203ENST00000529545 INO80Q9ULG1 1556 aaPredicted RBP14.6□□□□□ -0.07
VPS11-203ENST00000529545 PTPRKQ15262 1439 aa14.59□□□□□ -0.07
VPS11-203ENST00000529545 PLXNC1O60486 1568 aa14.59□□□□□ -0.07
VPS11-203ENST00000529545 TCOF1Q13428 1488 aaKnown RBP14.57□□□□□ -0.08
VPS11-203ENST00000529545 ADGBQ8N7X0 1667 aa14.57□□□□□ -0.08
VPS11-203ENST00000529545 MTUS2Q5JR59 1369 aa14.56□□□□□ -0.08
VPS11-203ENST00000529545 A2ML1A8K2U0 1454 aa14.54□□□□□ -0.08
VPS11-203ENST00000529545 APLP2Q06481 763 aa14.53□□□□□ -0.08
VPS11-203ENST00000529545 TOM1O60784 492 aa14.52□□□□□ -0.09
VPS11-203ENST00000529545 DNMT1P26358 1616 aaKnown RBP14.52□□□□□ -0.09
VPS11-203ENST00000529545 PIP4K2BP78356 416 aa14.51□□□□□ -0.09
VPS11-203ENST00000529545 RTEL1-TNFRSF6BF6WH68 1400 aa14.5□□□□□ -0.09
VPS11-203ENST00000529545 CPS1P31327 1500 aa14.5□□□□□ -0.09
VPS11-203ENST00000529545 POLR1AO95602 1720 aaPredicted RBP14.49□□□□□ -0.09
VPS11-203ENST00000529545 DHX29Q7Z478 1369 aaKnown RBP14.49□□□□□ -0.09
VPS11-203ENST00000529545 TNRQ92752 1358 aa14.49□□□□□ -0.09
VPS11-203ENST00000529545 ZNF644Q9H582 1327 aaPredicted RBP14.49□□□□□ -0.09
VPS11-203ENST00000529545 KIF3BO15066 747 aa14.48□□□□□ -0.09
VPS11-203ENST00000529545 HSPA1LP34931 641 aa14.48□□□□□ -0.09
VPS11-203ENST00000529545 ANKLE2Q86XL3 938 aa14.48□□□□□ -0.09
VPS11-203ENST00000529545 WASHC2CQ9Y4E1 1318 aa14.47□□□□□ -0.09
VPS11-203ENST00000529545 SHANK2Q9UPX8 1470 aa14.47□□□□□ -0.09
VPS11-203ENST00000529545 THEMISQ8N1K5 641 aaPredicted RBP14.47□□□□□ -0.09
VPS11-203ENST00000529545 TIAM1Q13009 1591 aa14.47□□□□□ -0.09
VPS11-203ENST00000529545 EHBP1L1Q8N3D4 1523 aa14.46□□□□□ -0.09
VPS11-203ENST00000529545 MBD5Q9P267 1494 aa14.46□□□□□ -0.09
VPS11-203ENST00000529545 FBXO31Q5XUX0 539 aaPredicted RBP14.46□□□□□ -0.09
VPS11-203ENST00000529545 FAM135AQ9P2D6 1515 aa14.46□□□□□ -0.1
VPS11-203ENST00000529545 PZPP20742 1482 aa14.45□□□□□ -0.1
VPS11-203ENST00000529545 RSPH4AQ5TD94 716 aa14.45□□□□□ -0.1
VPS11-203ENST00000529545 SAMD1Q6SPF0 538 aaPredicted RBP14.45□□□□□ -0.1
VPS11-203ENST00000529545 KDM5DQ9BY66 1539 aa14.45□□□□□ -0.1
VPS11-203ENST00000529545 MED1Q15648 1581 aaPredicted RBP14.44□□□□□ -0.1
VPS11-203ENST00000529545 MYCNP04198 464 aaPredicted RBP14.44□□□□□ -0.1
VPS11-203ENST00000529545 NEURL4Q96JN8 1562 aa14.43□□□□□ -0.1
VPS11-203ENST00000529545 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.43□□□□□ -0.1
VPS11-203ENST00000529545 CCDC141Q6ZP82 1450 aa14.43□□□□□ -0.1
VPS11-203ENST00000529545 CEP162Q5TB80 1403 aa14.42□□□□□ -0.1
VPS11-203ENST00000529545 NLRP1Q9C000 1473 aa14.42□□□□□ -0.1
VPS11-203ENST00000529545 MIA2Q96PC5 1412 aa14.41□□□□□ -0.1
VPS11-203ENST00000529545 CAPN15O75808 1086 aa14.41□□□□□ -0.1
VPS11-203ENST00000529545 FOXD4L1Q9NU39 408 aa14.41□□□□□ -0.1
VPS11-203ENST00000529545 UGGT1Q9NYU2 1555 aa14.41□□□□□ -0.1
VPS11-203ENST00000529545 NPHP4O75161 1426 aaPredicted RBP14.41□□□□□ -0.1
VPS11-203ENST00000529545 TSPY4P0CV99 314 aa14.4□□□□□ -0.1
VPS11-203ENST00000529545 TSPY10P0CW01 314 aa14.4□□□□□ -0.1
VPS11-203ENST00000529545 SPINK5Q9NQ38 1064 aaPredicted RBP14.39□□□□□ -0.11
VPS11-203ENST00000529545 DEPDC5O75140 1603 aa14.39□□□□□ -0.11
VPS11-203ENST00000529545 VWDEQ8N2E2 1590 aa14.39□□□□□ -0.11
VPS11-203ENST00000529545 MED14O60244 1454 aa14.38□□□□□ -0.11
VPS11-203ENST00000529545 CAMSAP2Q08AD1 1489 aa14.38□□□□□ -0.11
VPS11-203ENST00000529545 NCOA2Q15596 1464 aa14.37□□□□□ -0.11
VPS11-203ENST00000529545 IQGAP1P46940 1657 aa14.36□□□□□ -0.11
VPS11-203ENST00000529545 ARHGEF5Q12774 1597 aa14.34□□□□□ -0.11
VPS11-203ENST00000529545 ZNF219Q9P2Y4 722 aaPredicted RBP14.33□□□□□ -0.12
VPS11-203ENST00000529545 ZC3H13Q5T200 1668 aaKnown RBP14.33□□□□□ -0.12
VPS11-203ENST00000529545 LRRC7Q96NW7 1537 aa14.31□□□□□ -0.12
VPS11-203ENST00000529545 SYNMO15061 1565 aa14.31□□□□□ -0.12
VPS11-203ENST00000529545 RNF17Q9BXT8 1623 aaKnown RBP14.31□□□□□ -0.12
VPS11-203ENST00000529545 ABCC3O15438 1527 aa14.3□□□□□ -0.12
VPS11-203ENST00000529545 ALKQ9UM73 1620 aa14.3□□□□□ -0.12
VPS11-203ENST00000529545 ERVK-7P63135 1459 aa14.29□□□□□ -0.12
VPS11-203ENST00000529545 EIF2AK4Q9P2K8 1649 aaKnown RBP14.29□□□□□ -0.12
VPS11-203ENST00000529545 STRCP1A6NGW2 1772 aa14.29□□□□□ -0.12
VPS11-203ENST00000529545 MAST1Q9Y2H9 1570 aa14.27□□□□□ -0.12
VPS11-203ENST00000529545 CFAP65Q6ZU64 1925 aaKnown RBP14.27□□□□□ -0.13
VPS11-203ENST00000529545 SCAF11Q99590 1463 aaKnown RBP14.26□□□□□ -0.13
VPS11-203ENST00000529545 DSG3P32926 999 aa14.26□□□□□ -0.13
VPS11-203ENST00000529545 TXNDC2Q86VQ3 553 aa14.26□□□□□ -0.13
VPS11-203ENST00000529545 EID1Q9Y6B2 187 aa14.26□□□□□ -0.13
VPS11-203ENST00000529545 UBR1Q8IWV7 1749 aa14.26□□□□□ -0.13
VPS11-203ENST00000529545 CEP152O94986 1710 aa14.24□□□□□ -0.13
VPS11-203ENST00000529545 STAG3Q9UJ98 1225 aa14.23□□□□□ -0.13
VPS11-203ENST00000529545 LRRC9Q6ZRR7 1453 aa14.23□□□□□ -0.13
VPS11-203ENST00000529545 DUOX2Q9NRD8 1548 aa14.22□□□□□ -0.13
VPS11-203ENST00000529545 LTKP29376 864 aa14.22□□□□□ -0.13
VPS11-203ENST00000529545 SLIT1O75093 1534 aa14.21□□□□□ -0.13
VPS11-203ENST00000529545 ARHGAP23Q9P227 1491 aa14.21□□□□□ -0.13
VPS11-203ENST00000529545 MROH1Q8NDA8 1641 aa14.21□□□□□ -0.13
VPS11-203ENST00000529545 MYOM3Q5VTT5 1437 aa14.21□□□□□ -0.13
VPS11-203ENST00000529545 ARHGAP31Q2M1Z3 1444 aa14.19□□□□□ -0.14
VPS11-203ENST00000529545 RGS17Q9UGC6 210 aaPredicted RBP14.18□□□□□ -0.14
VPS11-203ENST00000529545 KANK1Q14678 1352 aa14.18□□□□□ -0.14
VPS11-203ENST00000529545 XIRP1Q702N8 1843 aaKnown RBP14.18□□□□□ -0.14
VPS11-203ENST00000529545 FAM135BQ49AJ0 1406 aa14.17□□□□□ -0.14
VPS11-203ENST00000529545 VPS8Q8N3P4 1428 aa14.17□□□□□ -0.14
VPS11-203ENST00000529545 KIF15Q9NS87 1388 aa14.17□□□□□ -0.14
VPS11-203ENST00000529545 TMEM2Q9UHN6 1383 aa14.17□□□□□ -0.14
VPS11-203ENST00000529545 PRDM15P57071 1507 aaPredicted RBP14.16□□□□□ -0.14
VPS11-203ENST00000529545 PIK3C2BO00750 1634 aa14.16□□□□□ -0.14
VPS11-203ENST00000529545 ZBTB22O15209 634 aa14.16□□□□□ -0.14
VPS11-203ENST00000529545 ERBINQ96RT1 1412 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms