RNA–Protein interactions for RNA: ENST00000529506.5

CMTM1-213, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-213ENST00000529506 MAST1Q9Y2H9 1570 aa27.66■■■□□ 2.02
CMTM1-213ENST00000529506 CAMSAP1Q5T5Y3 1602 aa27.64■■■□□ 2.02
CMTM1-213ENST00000529506 KDM5DQ9BY66 1539 aa27.63■■■□□ 2.01
CMTM1-213ENST00000529506 FBXO31Q5XUX0 539 aaPredicted RBP27.59■■■□□ 2.01
CMTM1-213ENST00000529506 NCKAP5LQ9HCH0 1330 aa27.59■■■□□ 2.01
CMTM1-213ENST00000529506 MYO3AQ8NEV4 1616 aa27.59■■■□□ 2.01
CMTM1-213ENST00000529506 TNRQ92752 1358 aa27.59■■■□□ 2.01
CMTM1-213ENST00000529506 ZNF142P52746 1687 aaPredicted RBP27.59■■■□□ 2.01
CMTM1-213ENST00000529506 PZPP20742 1482 aa27.58■■■□□ 2.01
CMTM1-213ENST00000529506 PLA2R1Q13018 1463 aa27.58■■■□□ 2.01
CMTM1-213ENST00000529506 CEP170BQ9Y4F5 1589 aaPredicted RBP27.58■■■□□ 2.01
CMTM1-213ENST00000529506 A2ML1A8K2U0 1454 aa27.57■■■□□ 2
CMTM1-213ENST00000529506 DUOX2Q9NRD8 1548 aa27.55■■■□□ 2
CMTM1-213ENST00000529506 PTPN23Q9H3S7 1636 aa27.55■■■□□ 2
CMTM1-213ENST00000529506 EIF2AK4Q9P2K8 1649 aaKnown RBP27.54■■■□□ 2
CMTM1-213ENST00000529506 ABCC5O15440 1437 aa27.53■■■□□ 2
CMTM1-213ENST00000529506 FGD6Q6ZV73 1430 aa27.53■■■□□ 2
CMTM1-213ENST00000529506 THEMISQ8N1K5 641 aaPredicted RBP27.53■■■□□ 2
CMTM1-213ENST00000529506 SHANK2Q9UPX8 1470 aa27.51■■■□□ 2
CMTM1-213ENST00000529506 RRP7BPQ9NSQ0 103 aa27.51■■□□□ 1.99
CMTM1-213ENST00000529506 RNF17Q9BXT8 1623 aaKnown RBP27.51■■□□□ 1.99
CMTM1-213ENST00000529506 KIF15Q9NS87 1388 aa27.5■■□□□ 1.99
CMTM1-213ENST00000529506 TCOF1Q13428 1488 aaKnown RBP27.49■■□□□ 1.99
CMTM1-213ENST00000529506 DAPK1P53355 1430 aa27.48■■□□□ 1.99
CMTM1-213ENST00000529506 DNMT1P26358 1616 aaKnown RBP27.48■■□□□ 1.99
CMTM1-213ENST00000529506 ZC3H13Q5T200 1668 aaKnown RBP27.47■■□□□ 1.99
CMTM1-213ENST00000529506 NLRP1Q9C000 1473 aa27.47■■□□□ 1.99
CMTM1-213ENST00000529506 ANKLE2Q86XL3 938 aa27.47■■□□□ 1.99
CMTM1-213ENST00000529506 ANKRD30AQ9BXX3 1397 aa27.47■■□□□ 1.99
CMTM1-213ENST00000529506 ERBINQ96RT1 1412 aa27.45■■□□□ 1.98
CMTM1-213ENST00000529506 ABCC3O15438 1527 aa27.45■■□□□ 1.98
CMTM1-213ENST00000529506 LTBP4Q8N2S1 1624 aa27.43■■□□□ 1.98
CMTM1-213ENST00000529506 IQSEC2Q5JU85 1478 aa27.43■■□□□ 1.98
CMTM1-213ENST00000529506 CHIC2Q9UKJ5 165 aa27.42■■□□□ 1.98
CMTM1-213ENST00000529506 CROCC2H7BZ55 1655 aa27.42■■□□□ 1.98
CMTM1-213ENST00000529506 KANK1Q14678 1352 aa27.41■■□□□ 1.98
CMTM1-213ENST00000529506 FAM50AQ14320 339 aaKnown RBP27.4■■□□□ 1.98
CMTM1-213ENST00000529506 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.4■■□□□ 1.98
CMTM1-213ENST00000529506 UGGT1Q9NYU2 1555 aa27.39■■□□□ 1.97
CMTM1-213ENST00000529506 ZNF335Q9H4Z2 1342 aaPredicted RBP27.39■■□□□ 1.97
CMTM1-213ENST00000529506 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.36■■□□□ 1.97
CMTM1-213ENST00000529506 SPATA31D1Q6ZQQ2 1576 aa27.36■■□□□ 1.97
CMTM1-213ENST00000529506 MROH1Q8NDA8 1641 aa27.36■■□□□ 1.97
CMTM1-213ENST00000529506 CFAP65Q6ZU64 1925 aaKnown RBP27.35■■□□□ 1.97
CMTM1-213ENST00000529506 ARHGAP31Q2M1Z3 1444 aa27.34■■□□□ 1.97
CMTM1-213ENST00000529506 ERVK-7P63135 1459 aa27.34■■□□□ 1.97
CMTM1-213ENST00000529506 CEP152O94986 1710 aa27.32■■□□□ 1.96
CMTM1-213ENST00000529506 PRDM15P57071 1507 aaPredicted RBP27.31■■□□□ 1.96
CMTM1-213ENST00000529506 POLR1AO95602 1720 aaPredicted RBP27.31■■□□□ 1.96
CMTM1-213ENST00000529506 ADGRL2O95490 1459 aa27.27■■□□□ 1.96
CMTM1-213ENST00000529506 MED14O60244 1454 aa27.26■■□□□ 1.95
CMTM1-213ENST00000529506 DEPDC5O75140 1603 aa27.26■■□□□ 1.95
CMTM1-213ENST00000529506 NPHP4O75161 1426 aaPredicted RBP27.25■■□□□ 1.95
CMTM1-213ENST00000529506 UBAP1LF5GYI3 381 aa27.24■■□□□ 1.95
CMTM1-213ENST00000529506 STAG3Q9UJ98 1225 aa27.24■■□□□ 1.95
CMTM1-213ENST00000529506 NEURL4Q96JN8 1562 aa27.23■■□□□ 1.95
CMTM1-213ENST00000529506 EID1Q9Y6B2 187 aa27.21■■□□□ 1.95
CMTM1-213ENST00000529506 ANKRD50Q9ULJ7 1429 aa27.21■■□□□ 1.95
CMTM1-213ENST00000529506 LMTK2Q8IWU2 1503 aa27.21■■□□□ 1.95
CMTM1-213ENST00000529506 CPS1P31327 1500 aa27.2■■□□□ 1.94
CMTM1-213ENST00000529506 TXNDC2Q86VQ3 553 aa27.19■■□□□ 1.94
CMTM1-213ENST00000529506 VWDEQ8N2E2 1590 aa27.17■■□□□ 1.94
CMTM1-213ENST00000529506 UBR1Q8IWV7 1749 aa27.16■■□□□ 1.94
CMTM1-213ENST00000529506 TOM1O60784 492 aa27.16■■□□□ 1.94
CMTM1-213ENST00000529506 SLC52A1Q9NWF4 448 aa27.15■■□□□ 1.94
CMTM1-213ENST00000529506 IDI1Q13907 227 aa27.14■■□□□ 1.94
CMTM1-213ENST00000529506 IQGAP1P46940 1657 aa27.14■■□□□ 1.93
CMTM1-213ENST00000529506 ROCK1Q13464 1354 aa27.13■■□□□ 1.93
CMTM1-213ENST00000529506 SCAF11Q99590 1463 aaKnown RBP27.13■■□□□ 1.93
CMTM1-213ENST00000529506 LTKP29376 864 aa27.11■■□□□ 1.93
CMTM1-213ENST00000529506 SLIT1O75093 1534 aa27.11■■□□□ 1.93
CMTM1-213ENST00000529506 ARHGAP23Q9P227 1491 aa27.1■■□□□ 1.93
CMTM1-213ENST00000529506 TMEM2Q9UHN6 1383 aa27.09■■□□□ 1.93
CMTM1-213ENST00000529506 RPRD2Q5VT52 1461 aaKnown RBP27.08■■□□□ 1.93
CMTM1-213ENST00000529506 NOS1P29475 1434 aa27.07■■□□□ 1.92
CMTM1-213ENST00000529506 EFCAB6Q5THR3 1501 aa27.07■■□□□ 1.92
CMTM1-213ENST00000529506 PPARGC1BQ86YN6 1023 aaKnown RBP27.07■■□□□ 1.92
CMTM1-213ENST00000529506 PIK3C2BO00750 1634 aa27.06■■□□□ 1.92
CMTM1-213ENST00000529506 KDM5AP29375 1690 aaKnown RBP27.06■■□□□ 1.92
CMTM1-213ENST00000529506 ITGAEP38570 1179 aa27.06■■□□□ 1.92
CMTM1-213ENST00000529506 HDGFP51858 240 aaKnown RBP27.05■■□□□ 1.92
CMTM1-213ENST00000529506 SCAF1Q9H7N4 1312 aaKnown RBP27.02■■□□□ 1.92
CMTM1-213ENST00000529506 DISP3Q9P2K9 1392 aa27■■□□□ 1.91
CMTM1-213ENST00000529506 PIP4K2BP78356 416 aa27■■□□□ 1.91
CMTM1-213ENST00000529506 TET3O43151 1660 aa26.99■■□□□ 1.91
CMTM1-213ENST00000529506 SYNMO15061 1565 aa26.99■■□□□ 1.91
CMTM1-213ENST00000529506 UNC13BO14795 1591 aa26.97■■□□□ 1.91
CMTM1-213ENST00000529506 NUP155O75694 1391 aa26.96■■□□□ 1.91
CMTM1-213ENST00000529506 BCANQ96GW7 911 aa26.95■■□□□ 1.9
CMTM1-213ENST00000529506 LRRC7Q96NW7 1537 aa26.95■■□□□ 1.9
CMTM1-213ENST00000529506 GCC2Q8IWJ2 1684 aa26.95■■□□□ 1.9
CMTM1-213ENST00000529506 ADGRB3O60242 1522 aa26.93■■□□□ 1.9
CMTM1-213ENST00000529506 KCNA6P17658 529 aa26.91■■□□□ 1.9
CMTM1-213ENST00000529506 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.91■■□□□ 1.9
CMTM1-213ENST00000529506 STRCP1A6NGW2 1772 aa26.91■■□□□ 1.9
CMTM1-213ENST00000529506 PPP1R15AO75807 674 aaPredicted RBP26.89■■□□□ 1.9
CMTM1-213ENST00000529506 CHGAP10645 457 aaKnown RBP26.89■■□□□ 1.9
CMTM1-213ENST00000529506 HSPA1LP34931 641 aa26.89■■□□□ 1.9
CMTM1-213ENST00000529506 SLC26A8Q96RN1 970 aa26.89■■□□□ 1.9
CMTM1-213ENST00000529506 IQGAP3Q86VI3 1631 aa26.87■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms