RNA–Protein interactions for RNA: ENST00000529355.1

CTR9-204, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-204ENST00000529355 PHF14O94880 888 aa11□□□□□ -0.65
CTR9-204ENST00000529355 SMYD5Q6GMV2 418 aa11□□□□□ -0.65
CTR9-204ENST00000529355 TSR1Q2NL82 804 aaKnown RBP10.99□□□□□ -0.65
CTR9-204ENST00000529355 JPH4Q96JJ6 628 aa10.99□□□□□ -0.65
CTR9-204ENST00000529355 CDHR5Q9HBB8 845 aa10.99□□□□□ -0.65
CTR9-204ENST00000529355 ADAM33Q9BZ11 813 aa10.98□□□□□ -0.65
CTR9-204ENST00000529355 ZC3H15Q8WU90 426 aaKnown RBP10.97□□□□□ -0.65
CTR9-204ENST00000529355 NUTM2FA1L443 756 aa10.96□□□□□ -0.65
CTR9-204ENST00000529355 TULP1O00294 542 aaPredicted RBP10.95□□□□□ -0.66
CTR9-204ENST00000529355 GPR37O15354 613 aa10.95□□□□□ -0.66
CTR9-204ENST00000529355 EN1Q05925 392 aaPredicted RBP10.95□□□□□ -0.66
CTR9-204ENST00000529355 TYW1BQ6NUM6 668 aa10.95□□□□□ -0.66
CTR9-204ENST00000529355 MAP3K7O43318 606 aa10.94□□□□□ -0.66
CTR9-204ENST00000529355 ZDHHC16Q969W1 377 aa10.94□□□□□ -0.66
CTR9-204ENST00000529355 EPAS1Q99814 870 aa10.94□□□□□ -0.66
CTR9-204ENST00000529355 GPIHBP1Q8IV16 184 aa10.93□□□□□ -0.66
CTR9-204ENST00000529355 PBX2P40425 430 aa10.92□□□□□ -0.66
CTR9-204ENST00000529355 POTEEQ6S8J3 1075 aa10.92□□□□□ -0.66
CTR9-204ENST00000529355 NPDC1Q9NQX5 325 aaPredicted RBP10.92□□□□□ -0.66
CTR9-204ENST00000529355 FECHP22830 423 aa10.91□□□□□ -0.66
CTR9-204ENST00000529355 C6orf132Q5T0Z8 1188 aa10.91□□□□□ -0.66
CTR9-204ENST00000529355 RGS20O76081 388 aa10.89□□□□□ -0.67
CTR9-204ENST00000529355 COL9A1P20849 921 aa10.89□□□□□ -0.67
CTR9-204ENST00000529355 PPP4R3BQ5MIZ7 849 aa10.89□□□□□ -0.67
CTR9-204ENST00000529355 FBXW7Q969H0 707 aa10.88□□□□□ -0.67
CTR9-204ENST00000529355 IRX2Q9BZI1 471 aaPredicted RBP10.88□□□□□ -0.67
CTR9-204ENST00000529355 AXIN2Q9Y2T1 843 aa10.88□□□□□ -0.67
CTR9-204ENST00000529355 ZMYND10O75800 440 aa10.87□□□□□ -0.67
CTR9-204ENST00000529355 PTGDRQ13258 359 aa10.87□□□□□ -0.67
CTR9-204ENST00000529355 PSEN2P49810 448 aa10.86□□□□□ -0.67
CTR9-204ENST00000529355 BCL2L12Q9HB09 334 aa10.85□□□□□ -0.67
CTR9-204ENST00000529355 SLC24A3Q9HC58 644 aa10.84□□□□□ -0.67
CTR9-204ENST00000529355 PSDA5PKW4 1024 aaPredicted RBP10.83□□□□□ -0.68
CTR9-204ENST00000529355 KCNK17Q96T54 332 aa10.83□□□□□ -0.68
CTR9-204ENST00000529355 FCHSD2O94868 740 aa10.82□□□□□ -0.68
CTR9-204ENST00000529355 BARGINQ6ZT62 677 aa10.82□□□□□ -0.68
CTR9-204ENST00000529355 FAM161AQ3B820 660 aa10.81□□□□□ -0.68
CTR9-204ENST00000529355 DMRTA1Q5VZB9 504 aa10.81□□□□□ -0.68
CTR9-204ENST00000529355 FAM198AQ9UFP1 575 aa10.81□□□□□ -0.68
CTR9-204ENST00000529355 GNPATO15228 680 aa10.8□□□□□ -0.68
CTR9-204ENST00000529355 C3orf80F5H4A9 247 aa10.79□□□□□ -0.68
CTR9-204ENST00000529355 PTPREP23469 700 aa10.79□□□□□ -0.68
CTR9-204ENST00000529355 PROX2Q3B8N5 592 aa10.79□□□□□ -0.68
CTR9-204ENST00000529355 HIC1Q14526 733 aa10.78□□□□□ -0.68
CTR9-204ENST00000529355 PADI6Q6TGC4 694 aa10.78□□□□□ -0.68
CTR9-204ENST00000529355 KRI1Q8N9T8 703 aaKnown RBP10.76□□□□□ -0.69
CTR9-204ENST00000529355 ARHGAP33O14559 1287 aa10.75□□□□□ -0.69
CTR9-204ENST00000529355 CDCA7LQ96GN5 454 aa10.75□□□□□ -0.69
CTR9-204ENST00000529355 TSKSQ9UJT2 592 aa10.75□□□□□ -0.69
CTR9-204ENST00000529355 PPP1R3GB7ZBB8 358 aa10.74□□□□□ -0.69
CTR9-204ENST00000529355 PRSS12P56730 875 aa10.74□□□□□ -0.69
CTR9-204ENST00000529355 ADGRD1Q6QNK2 874 aa10.73□□□□□ -0.69
CTR9-204ENST00000529355 TTC13Q8NBP0 860 aa10.73□□□□□ -0.69
CTR9-204ENST00000529355 ZBED2Q9BTP6 218 aa10.73□□□□□ -0.69
CTR9-204ENST00000529355 IRF6O14896 467 aa10.72□□□□□ -0.69
CTR9-204ENST00000529355 CCDC102AQ96A19 550 aa10.72□□□□□ -0.69
CTR9-204ENST00000529355 MAP2K5Q13163 448 aa10.71□□□□□ -0.69
CTR9-204ENST00000529355 NLRP7Q8WX94 980 aa10.71□□□□□ -0.69
CTR9-204ENST00000529355 PHOX2BQ99453 314 aa10.71□□□□□ -0.69
CTR9-204ENST00000529355 CERKQ8TCT0 537 aa10.7□□□□□ -0.7
CTR9-204ENST00000529355 SMAPO00193 183 aa10.69□□□□□ -0.7
CTR9-204ENST00000529355 IFFO2Q5TF58 517 aa10.69□□□□□ -0.7
CTR9-204ENST00000529355 MINK1Q8N4C8 1332 aaPredicted RBP10.68□□□□□ -0.7
CTR9-204ENST00000529355 TRIM6-TRIM34B2RNG4 842 aa10.68□□□□□ -0.7
CTR9-204ENST00000529355 KIAA1468Q9P260 1216 aa10.68□□□□□ -0.7
CTR9-204ENST00000529355 ADGRG1Q9Y653 693 aa10.68□□□□□ -0.7
CTR9-204ENST00000529355 TRIM66O15016 1216 aa10.67□□□□□ -0.7
CTR9-204ENST00000529355 AK7Q96M32 723 aa10.66□□□□□ -0.7
CTR9-204ENST00000529355 VPS9D1Q9Y2B5 631 aa10.66□□□□□ -0.7
CTR9-204ENST00000529355 TK2O00142 265 aa10.65□□□□□ -0.7
CTR9-204ENST00000529355 NUDT18Q6ZVK8 323 aa10.65□□□□□ -0.7
CTR9-204ENST00000529355 TATDN2Q93075 761 aa10.63□□□□□ -0.71
CTR9-204ENST00000529355 KCNH8Q96L42 1107 aa10.63□□□□□ -0.71
CTR9-204ENST00000529355 EYA1Q99502 592 aa10.63□□□□□ -0.71
CTR9-204ENST00000529355 RBM27Q9P2N5 1060 aaKnown RBP10.63□□□□□ -0.71
CTR9-204ENST00000529355 SEPT9Q9UHD8 586 aaPredicted RBP10.63□□□□□ -0.71
CTR9-204ENST00000529355 PNMA3Q9UL41 463 aa10.63□□□□□ -0.71
CTR9-204ENST00000529355 METTL3Q86U44 580 aaKnown RBP10.62□□□□□ -0.71
CTR9-204ENST00000529355 KCTD12Q96CX2 325 aaKnown RBP10.62□□□□□ -0.71
CTR9-204ENST00000529355 REPIN1Q9BWE0 567 aaKnown RBP10.62□□□□□ -0.71
CTR9-204ENST00000529355 PXYLP1Q8TE99 480 aa10.61□□□□□ -0.71
CTR9-204ENST00000529355 GPBP1L1Q9HC44 474 aaPredicted RBP10.61□□□□□ -0.71
CTR9-204ENST00000529355 HRO43593 1189 aa10.6□□□□□ -0.71
CTR9-204ENST00000529355 BRPF1P55201 1214 aaPredicted RBP10.6□□□□□ -0.71
CTR9-204ENST00000529355 PDE4DQ08499 809 aa10.6□□□□□ -0.71
CTR9-204ENST00000529355 STAC3Q96MF2 364 aa10.6□□□□□ -0.71
CTR9-204ENST00000529355 SLC4A5Q9BY07 1137 aa10.6□□□□□ -0.71
CTR9-204ENST00000529355 A0A0G2JS52 829 aa10.59□□□□□ -0.71
CTR9-204ENST00000529355 PACS2Q86VP3 889 aa10.59□□□□□ -0.71
CTR9-204ENST00000529355 BHMG1C9JSJ3 638 aaPredicted RBP10.58□□□□□ -0.72
CTR9-204ENST00000529355 Q6ZNB5 142 aa10.58□□□□□ -0.72
CTR9-204ENST00000529355 RABGEF1Q9UJ41 708 aa10.58□□□□□ -0.72
CTR9-204ENST00000529355 RCCD1A6NED2 376 aa10.57□□□□□ -0.72
CTR9-204ENST00000529355 ONECUT3O60422 494 aaPredicted RBP10.57□□□□□ -0.72
CTR9-204ENST00000529355 MDM2Q00987 491 aaPredicted RBP10.57□□□□□ -0.72
CTR9-204ENST00000529355 OATP04181 439 aa10.56□□□□□ -0.72
CTR9-204ENST00000529355 NBPF26B4DH59 902 aa10.55□□□□□ -0.72
CTR9-204ENST00000529355 NEUROD2Q15784 382 aa10.55□□□□□ -0.72
CTR9-204ENST00000529355 AMHR2Q16671 573 aa10.55□□□□□ -0.72
CTR9-204ENST00000529355 PARP9Q8IXQ6 854 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms